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Rabbit anti occludin

Manufactured by Abcam
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Rabbit anti-occludin is a primary antibody that recognizes the tight junction protein occludin. Occludin is a transmembrane protein that is a key component of tight junctions, which are important for the regulation of paracellular permeability in epithelial and endothelial cells. The rabbit anti-occludin antibody can be used for the detection and analysis of occludin in various applications, such as Western blotting, immunohistochemistry, and immunofluorescence.

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27 protocols using rabbit anti occludin

1

Intestinal Tight Junction Protein Analysis

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Intestinal mucosal biopsies were frozen in liquid nitrogen until further use.
Proteins were extracted from intestinal tissues, separated by SDS-PAGE, and then
subsequently transferred onto PVDF membranes. The membranes were incubated with
primary antibody rabbit anti-ZO-1(1:50, abcam), rabbit anti-occludin (1:250,
abcam), or rabbit anti-β-Actin (1:5000, Beijing Zhongshan) over-night at 4°C,
followed by exposure to secondary antibody (HRP- anti-rabbit IgG, 1:1000,
GenScript) for 2 hours at room temperature. The proteins were visualized with an
enhanced chemiluminescent detection system (Thermo) and exposed to X-ray film.
Densitometry of the blots was performed using Quantity One 1-D analysis software
(Bio-Rad).
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2

Cardiac Tissue Protein Extraction and Analysis

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The cardiac tissues were homogenized on ice in modified radioimmunoprecipitation assay lysis buffer containing 25 mM Tris-HCl pH 7.4, 150 mM NaCl, 1 mM ethylenediaminetetraacetic acid, 1% NP-40, 0.1% sodium dodecyl sulfate, 1 mM phenylmethylsulfonyl fluoride and Protease Inhibitor Cocktail (Sigma-Aldrich, St louis, MO). Protein concentration in the tissue homogenates was determined by a bovine serum albumin assay kit (Pierce Rockford, IL), and 50 μg of total protein from each sample was fractionated on 4%–12% Bis-Tris gradient gel (Invitrogen, Carlsbad, CA) at 150 V for 2 h and transferred to a nitrocellulose membrane. The membrane was then incubated with rabbit anti-occludin at 1:500 dilutions (Abcam) and anti-GAPDH antibodies (Cell Signaling Technology) at 1:4000 dilution overnight. The appropriate horseradish peroxidase-conjugated secondary antibodies (Sigma-Aldrich) were used at a 1:4000 dilution. The membrane was visualized with the FluorChem R system (ProteinSimple) and measured by Image J software.
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3

Quantitative Analysis of Intestinal Tight Junctions

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Frozen ileum tissue (ca. 100 mg) was homogenized with cell lysis buffer (500 μl) (Cat EPX-99999-000 eBioscience, San Diego, USA) with 0.1 % proteinase inhibitor cocktail (Sigma, St. Louis, MO) and 1 % NP40 in ceramic bead tubes using Fast Prep-24™ 5G machine (M.P. Biomedical LLC, California, USA) at speed 6.0 msec for 30 s (twice), and then centrifuged at 12,000 g for 15 min at 4 °C. Supernatants were collected and 100 μg of protein was used for Western blot analyses. Membranes were probed with 1:1000 dilution of rabbit anti-VE-cadherin, rabbit anti-occludin, and rabbit anti-claudin 3 (Abcam, Cambridge, MA) primary antibodies and subsequently incubated with 1:10,000 dilution of goat-anti-rabbit HRP (BioRad Laboratories Inc., California). Detection was performed using a chemilumiescence system (super signal west chemiluminescent substrate, Thermo Scientific). Immuno-quantitation was performed by densitometric scanning of the blot and normalized against the signal from β-actin (Sigma Aldrich, St Louis, MO) using Image Quant software (Image Quant TL 8.1 Version). We measured calcium levels in urine from breast-fed and formula fed piglets using colorimetric assay from Bio Vision (Catalog#K380-250) as per manufacturer’s instructions.
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4

Spinal Cord Injury Protein Analysis

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Western blot (WB) was performed according to a previous method (22 (link)). Briefly, after animals were anesthetized and decapitated, spinal cord tissues of the lesion site were removed and collected immediately on ice (8 (link)). Then, samples were homogenized and lysed in RIPA buffer containing protease and phosphatase inhibitors. After centrifuging at 12,000 rpm for 10 min at 4°C, protein concentrations were determined using a BCA Assay Kit (Beyotime). Equal amounts of protein lysate (20 μg) were separated by 10% SDS-PAGE electrophoresis, followed by transferring onto PVDF membranes. After blocking in 5% fresh-non-fat skim milk prepared in TBST for 2 h at room temperature, membranes were incubated with the appropriate primary antibodies at 4°C overnight. Then, membranes were incubated with corresponding HRP-conjugated secondary antibodies for 2 h at room temperature after washing with TBST. Finally, protein bands were visualized with chemiluminescent HRP Substrate (Thermo Fisher) under Western Lightning-ECL (Bio-Rad, USA). The following primary antibodies were used: mouse anti-Histone H3 (citrulline R2+ R8 +R17) (Abcam; 1:1000), rabbit anti-ZO-1 (Abcam, 1:5000), rabbit anti-occludin (Abcam, 1:5000), rabbit anti-transient receptor potential vanilloid type 4 (TRPV4) (Abcam; 1:1000), and mouse anti-GAPDH (Zen-bio, 1:5000).
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5

Western Blot Analysis of Tight Junction Proteins

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The anterior and posterior brain regions were homogenized and equal concentrations of homogenate protein were loaded in 4–20% gradient gels, followed by electrophoresis and semi‐dry transfer. The membranes were blocked using Odyssey blocking buffer followed by overnight incubation in 1:2500 rabbit anti‐Claudin 1 abcam (Cambridge, MA), 1:1000 rabbit anti‐ZO‐1 Invitrogen (Grand Island, NY), 1:1000 rabbit anti‐Aquaporin 4 (abcam), or 1:250 rabbit anti‐Occludin (abcam) with either 1: 2000 mouse anti‐GAPDH (abcam) or 1:2000 mouse anti‐β‐actin antibodies. After three washes (5 minutes each), the membranes were incubated in donkey anti‐rabbit IRDye 700 and donkey anti‐mouse IRDye 800 for 45 minutes. The membranes were scanned using Odyssey scanner and the bands were analyzed using Image Studio Lite Version 3.1 Li‐Cor (Lincoln, NE). Relative expression was calculated as the ratio of fluorescence intensity of target protein to the intensity of GAPDH or βActin and then further normalized to the corresponding expression in the normal pregnant rats.
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6

Immunofluorescence Staining of Cell Junctions

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For immunofluorescence staining, cells or spinal cord sections were fixed in 4% PFA for 15 min and subsequently permeabilized in 0.2% Triton X-100/PBS for 20 min. The samples were treated with 5% bovine serum albumin (BSA) for 1 h at room temperature to block nonspecific binding. The samples were incubated overnight at 4 °C with primary antibody specific for rabbit anti-ZO1 (1:50, Invitrogen), rabbit anti-claudin-5 (1:100; Invitrogen), rabbit anti-occludin (1:50; Abcam), mouse anti-CD31 (1:200, Invitrogen), mouse anti-NeuN (1:500, Abcam), and rabbit anti-GRP78 (1:200, Proteintech). Samples were washed thrice with PBS and incubated with Alexa 594- or Alexa 488-conjugated secondary antibodies (1:200, Jackson ImmunoResearch, USA) for 1 h in the dark. Finally, nuclei were labeled with DAPI and images were obtained under similar exposure time and conditions.
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7

Immunofluorescent Staining of Colon Tissue

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For immunofluorescence staining, paraffin embedded sections (5 μm) with colon tissues were hydrated, treated for antigen retrieval with citrate buffer (pH 6), and the slides of cells were fixed in 4% formalin for 30 min and then washed with PBS for 3 times. Then they were blocked with 10% donkey serum for 30 min at 37 °C and incubated with the corresponding primary antibodies overnight at 4 °C. Antibodies used were: goat anti-ZO-1 (1:200, arigo) and rabbit anti-occludin (1:200, abcam). After washing with PBS for 3 times, slides were stained with secondary antibodies for 1 h at room temperature. Secondary antibodies used were Alexa Fluor 488 conjugated donkey anti-goat IgG and Alexa Fluor 594 conjugated donkey anti-rabbit IgG (1:200, Antgene Biotech Co., Ltd. Wuhan, China). For Ulex europaeus agglutinin-I (UEA-I) staining, sections were incubated with rhodamine UEA-I for 1 h at 37 °C. The nuclei were stained with DAPI (Beyotime Biotech, China) for 8 min at room temperature. Images were acquired on confocal microscope (Nikon, Japan).
Immunohistochemistry (IHC) of colon tissues was performed using a VECTASTAIN Elite ABC kit and a DAB Detection kit (Boster Biological Technology Co., Ltd) following the manufacturer’s instructions with an anti-F4/80 antibody (ARG55738, arigo).
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8

Protein Quantification in Cell Lysates

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Lysed cells and tissues were centrifuged at 13,000 x g for 30 min at 4°C after being incubated in cold RIPA buffer for 30 min. A BCA assay reagent (Beyotime) was used to calculate the protein levels of the lysates. Rabbit anti-occludin (1:1,000, Abcam), rabbit anti-ZO-1 (1:1,000, Abcam), and rabbit anti-β-actin (1:1,000, Abcam) were employed as the main antibodies. The chemiluminescent technique was used to identify proteins, and ImageJ was used to quantify them.
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9

ARPE-19 Cell Culture and Characterization

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ARPE-19 cells were obtained from the American Type Culture Collection (ATCC) (Manassas, VA, USA). Dulbecco’s Modified Eagle’s Medium: nutrient mixture F12 (hereafter named DMEM:F12), fetal bovine serum (FBS), bovine serum albumin (BSA), trypsin-EDTA, 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), sodium bicarbonate, gentamycin, phosphate-buffered saline (PBS), penicillin, streptomycin, 4′,6-diamidino-2-phenylindole (DAPI), propidium iodide (PI), Tween-20 and PAP pen were purchased from Sigma-Aldrich (St. Louis, MO, USA). Fluorescein isothiocyanate (FITC)-labeled annexin V (to bind PS), annexin V-binding buffer containing 10 mM HEPES (pH 7.4), 140 mM NaCl, and 2.5 mM CaCl2, were purchased from Becton Dickinson Biosciences (BD), Belgium. Minimum essential medium (MEM) was purchased from Invitrogen (Carlsbad, CA, USA). Pipettes, 25 cm2 flasks, 15 mL and 50 mL centrifugation tubes, 1 L glass bottles, and pipette tips were supplied by VWR International (West Chester, PA, USA). Vacuum filtration rapid filter mix was supplied by BioNordika (Oslo, Norway). Mouse anti-RPE65, rabbit anti-occludin, FITC-conjugated goat anti-mouse IgG and FITC-conjugated goat anti-rabbit IgG antibodies were obtained from Abcam (Cambridge, UK). Mouse anti-ZO-1 and Alexa Fluor 568 phalloidin were purchased from Life Technologies (Carlsbad, CA, USA).
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10

Protein Extraction and Analysis of Occludin

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Protein extraction and analysis were carried out according to the procedure of Hu et al. (29 (link)). The protein from jejunal mucosa was extracted by ProteoJET Total Protein Extraction Kit (Fermentas, Hanover, MD, USA) and its content was determined by BCA Protein Assay Kit (Beyotime, Shanghai, China). The protein was separated by 10% Sodium dodecyl-sulfate polyacrylamide electrophoresis (SDS-PAGE), and then transferred to an activated polyvinylidene difluoride membranes (Bio-Rad Laboratories, Hercules, CA, USA). The membrane was blocked by 5% BSA-TBST for 60 min, washed with TBST for 3 times, and then incubated overnight at 4°C using an appropriate primary antibody. The primary antibodies include Rabbit anti occludin (1:200, Abcam) and Rabbit anti-β-Actin (1:1000, Abcam). After incubation with a goat anti-rabbit IgG secondary antibody for 60 min, the target bands were displayed by Odyssey Infrared Imaging System (LI-COR Biosciences, Lincoln, NE, USA) and analyzed by Quantity One Software (BioRad Laboratories, Hercules, CA, USA). The target protein-to-β-actin protein ratio was used to express the relative abundance of occludin in jejunal mucosa.
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