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62 protocols using penicillin streptomycin mixture

1

Neuroblastoma Cell Lines and Compound Screening

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The human NB cell lines (SK-N-SH, SH-SY5Y, SK-N-BE (2), and IMR-32) were obtained from the National Collection of Authenticated Cell Cultures in Shanghai, China.
SK-N-SH and IMR-32 cells were cultured in Dulbecco’s modified Eagle medium (DMEM) containing 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin–streptomycin mixture (Sigma-Aldrich). SK-N-BE (2) cells were cultured in DMEM/F12 (1:1) with 10% FBS and 1% penicillin–streptomycin mixture (Sigma-Aldrich). SH-SY5Y cells were cultured in a mixture of MEM (44.5%) and Ham’s F12 (44.5%), supplemented with 10% FBS (Gibco), 1% non-essential amino acids (NEAAs) (Gibco), and 1% penicillin–streptomycin mixture (Sigma-Aldrich). All cells were maintained in an incubator at 37°C with a humidified atmosphere containing 5% CO2.
Gomisin B and ginsenoside Rh2 chemical reagents were procured from MedChemExpress. Gomisin B (purity ≥99.9%) and ginsenoside Rh2 (purity ≥99.9%) were dissolved in dimethyl sulfoxide (DMSO). To ensure minimal impact on cells, the final concentration of DMSO in the cell culture medium was maintained below 0.1%.
Cell viability was assessed using the CellCounting-Lite 2.0 Luminescent Cell Viability Assay (Vazyme, DD1101-03) and measured using a multimode microplate detection system (PerkinElmer EnVision 2015). Aidi injection was donated by Guizhou Ebay Pharmaceutical Co., Ltd.
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2

Cell Lines for HCV C Protein Study

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The human Jurkat T cell (subclone E6-1) and its Lck kinase deficient derivative, J.Cam1, were obtained from American Tissue Type Collection. Three HCV C protein-expressing Jurkat T cell lines (JHC.d, JHC.g and JHC.h) contain DNA sequence from the infectious HCV H77 strain encoding the first 194 amino acid of the HCV polyprotein as described previously [17 (link),18 (link)]. Single cell clones were selected on puromycin (0.2 µg/mL final concentration) and tested for the C protein expression by western blotting. Human monocytic THP-1 cell line was kindly provided by Dr. Göran Akusjärvi, Uppsala University, Uppsala, Sweden. The human embryonic kidney cell line HEK293TT expressing high levels of SV40 large T-antigen was kindly provided by Dr. Helena Faust [44 (link)]. The Jurkat, J.Cam1, JHC.d, JHC.g, JHC.h (collectively as JHC) and THP-1 cell lines were cultured in RPMI-1640 media (Sigma-Aldrich) supplemented with 10% fetal calf serum (FCS) and 1% penicillin-streptomycin mixture (Sigma-Aldrich) whereas 293TT cells were cultured in DMEM (high glucose) medium (Sigma-Aldrich) with 10% FCS and 1% penicillin-streptomycin mixture at 37 °C in a 5% CO2 humidified atmosphere.
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3

Cell Culture of Liver Cancer and Cardiomyoblast Lines

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Human liver cancer HepG2 cell line (ATCC HB8065) and rat cardiomyoblast cell line H9c2 (ATCC-CRL1446) were purchased in ATCC (American Type Culture Collection, Manassas, VA, USA). The cells were cultured in standard conditions (37 °C, 5% CO2) in EMEM medium (ATCC, Manassas, VA, USA), supplemented with 10% FBS (Gibco, Waltham, MA, USA) and antibiotics (1% streptomycin/penicillin mixture, Sigma–Aldrich, Darmstadt, Germany) or DMEM high glucose (ATCC, Manassas, VA, USA) supplemented with 10% FBS (Gibco, Waltham, MA, USA) and antibiotics (1% streptomycin/penicillin mixture, Sigma–Aldrich, Darmstadt, Germany), respectively.
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4

Cytotoxicity Assays and Reactive Oxygen Species Detection

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Dulbecco’s Modified Eagle’s Medium (DMEM), fetal bovine serum (FBS), and penicillin–streptomycin mixture were obtained from Millipore Sigma (Merck KGaA, Darmstadt, Germany). Dulbecco’s Modified Eagle’s Medium with no glucose (cat. no. 11966025) was obtained from Gibco (Thermo Fisher Scientific, Inc, Waltham, MA, USA). Thiazolyl blue tetrazolium bromide (MTT; cat. no. M5655), neutral red solution (NR; cat. no. N2889), sulforhodamine B (SRB; cat. no. S1402), 2, 7- dichlorofluorescein diacetate (DCFH-DA; cat. no. D6883), edaravone (cat. no. M70800), and metformin (cat. no. 317240) were obtained from Sigma–Aldrich (Merck, Algés, Portugal). Perampanel (cat. no. 23003) was obtained from Cayman (Tallinn, Estonia).
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5

Cytotoxicity Assays with Cell Lines

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Dulbecco’s Modified Eagle’s Medium (DMEM), Fetal Bovine Serum (FBS), and Penicillin-Streptomycin mixture were obtained from Millipore Sigma (Merck KGaA, Darmstadt, Germany). Bisbenzimide H33342 trihydrochloride (Hoechst 33342; cat. no. B2261), Thiazolyl Blue Tetrazolium Bromide (MTT; cat. no. M5655), Neutral Red Solution (cat. no. N2889), Sulforhodamine B (cat. no. S1402), propranolol (cat. no. P0884), and isoprenaline (cat. no. I5627) were purchased from Sigma-Aldrich (Merck KGaA, Darmstadt, Germany). paclitaxel (Taxol; cat. no. 1097) and ICI 118,551 (cat. no. 0821) were purchased from Tocris Bioscience (Bristol, UK). Waters Alliance 2695 pump, 3030 Reagent kit®, Rheodyne loop injector, and the Decade electrochemical detector (ECD) were purchased from, respectively, Waters Corporation (Milford, MA, USA), Chromsystems GmbH (Munich, Germany), and Antec Scientific (Zoeterwoude, The Netherlands).
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6

CHL-1 Cell Culture Protocol

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CHL‐1 cells were cultured in RPMI‐1640 medium (Sigma Aldrich) supplemented with 10% foetal bovine serum (Thermo Fischer) and 50 U/ml of a penicillin/streptomycin mixture (Sigma Aldrich). The cells were grown in 75 cm2 flasks (Corning Inc.) and incubated at 37°C with 5% CO2.
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7

Neuronal Cell Culture Reagents

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MnCl2•4H2O, L-polylysine, D-Hank’s solution, and penicillin–streptomycin mixture were purchased from Sigma. DMEM-F12 medium was from HyClone. Neurobasal-A medium (without phenol red and serum) and fetal bovine serum (FBS) were purchased from Gibco. Human leukocyte antigen B27 (B27) was obtained from Invitrogen Life Technologies.
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8

Evaluating E. faecium Adhesion to Caco-2 Cells

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Caco-2, the colon adenocarcinoma cell line, was used to evaluate the adhesion ability of E. faecium CM33 to human epithelial cells. RPMI medium supplemented with 10% (v/v) fetal bovine serum and 1% (v/v) penicillin/streptomycin mixture (Sigma Chemical Co., Poole, UK) was used to culture human colon cancer cells. Cells were seeded on 24-well tissue culture plates and incubated at 37°C in 5% CO2 in a humidified atmosphere. Before the adhesion assay, fresh antibiotic-free RPMI was used to wash wells, which have a monolayer of Caco-2 cells. Then, each well was inoculated with 1 × 107 cfu/ml of E. faecium in a total volume of 1 ml and incubated at 37°C for 3 h in an atmosphere of 5% (v/v) CO2. The wells were washed thrice with a pre-warmed phosphate buffer saline (Sigma Chemical Co., Poole, UK) to remove non-attached cells of E. faecium. To detach the cells, 1 ml of 1% Triton X-100 (Sigma Chemical Co., Poole, UK) was added to each well with gently stirring for 5–10 min and then the viable human colon cancer cells, Caco-2, were counted. Finally, bacteria and Caco-2 cells were cultured onto MRS agar by the pure plate method and incubated at 37°C anaerobically. The total number of bacteria attached to viable Caco-2 cells expressed as bacterial adhesion and carried out in triplicate.
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9

Evaluating Biocompatibility of P(3HB-3HV)-CS Spheres

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In order to investigate the biocompatibility of simple and antibiotic-loaded P(3HB-3HV)-CS spheres, the human dermal fibroblasts CCD-1070Sk cell line (ATCC® CRL-2091™) was employed. Briefly, cells were cultured in Dulbecco’s Modified Eagle’s Medium (DMEM, Sigma/Merck, Steinheim, Germany), supplemented with 10% fetal bovine serum (FBS, Gibco) and 1% penicillin-streptomycin mixture (Sigma/Merck) all throughout the experiment in standard cell culture conditions (5% CO2, 37 °C). One day prior to spheres treatment, CCD-1070Sk cells were seeded in 12-well or 96-well plates at an initial density of 1 × 105 and 0.1 × 105 cells/well, respectively, and incubated overnight to allow cellular attachment. The next day, the culture medium was discarded and replaced with fresh medium for experimental controls and with simple and antibiotic-loaded spheres at a final concentration of 1 mg/mL. Biocompatibility assays were performed as described below after 24 h and 7 days of treatment.
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10

Culturing Human Colorectal Carcinoma Cells

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The cell line selected for this study, HT-29 (ATCC® HTB-38 ™)—human colorectal carcinoma—was acquired as a frozen item from the American Type Culture Collection (ATCC). For cells’ culture and growth, a specific culture medium was used—McCoy’s 5a modified medium (ATCC® 30-2007 ™)—which was completed with 10% FBS (fetal bovine serum, Gibco) and a 1% penicillin/streptomycin mixture (Sigma Aldrich, Merck KGaA Darmstadt, Germany). The experiments were performed in accordance with the standard conditions for cell culture, as follows: incubation at 37 °C in 5% CO2 atmosphere.
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