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Spectramax paradigm multi mode detection platform

Manufactured by Molecular Devices
Sourced in United States, Austria

The SpectraMax Paradigm Multi-Mode Detection Platform is a versatile laboratory instrument designed for performing various types of absorbance, fluorescence, and luminescence assays. It is capable of measuring microplate-based samples and supports a wide range of detection modes, including UV-Vis absorbance, fluorescence intensity, time-resolved fluorescence, and luminescence.

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29 protocols using spectramax paradigm multi mode detection platform

1

Soil Enzyme Activity Quantification

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Activities of the soil urease, cellulase, sucrase, dehydrogenase and acid phosphatase were determined by spectrophotometry. Firstly, 0.05 g of soil was added to 450 mL of phosphate buffer solution (PBS, 0.1 mol L−1, pH 7.4). Then the solution was mixed by shaking, and centrifuged at 2000 rpm at 4 ℃ for 10 min and supernatant was collected with a new centrifugal tube. The supernatant and reagents were added according to the kit instructions (Shanghai Enzyme-linked Biotechnology Co., Ltd., Shanghai, China). Absorbance at 450 nm was measured on a SpectraMax Paradigm Multi-Mode detection platform (Molecular devices, San Jose, CA, USA).
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2

LDH Assay for Cytotoxicity Evaluation

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CM (20,000 cells per well) were seeded on 96-well-plates. After SIN-1 treatment (100 µL), 25 µL of the medium was transferred into a new 96-well-plate. 175 µL of LDH solution (0.24 mmol/L NADH, 0.57 mmol/L sodium pyruvate, 33 mmol/L KH2PO4, 66 mmol/L K2HPO4, pH 7.4) was added and absorbance was recorded at 340 nm every 3 min for 30 min using SpectraMax® Paradigm® Multi-Mode Detection Platform (Molecular Devices GmbH, Biberach an der Riss, Germany). 0.1% Triton-X-100 was used as a positive control for maximum LDH-release and untreated cells as a control for a spontaneous LDH-release.
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3

Quantifying TDP-43 Aggregation in Neuro2a Cells

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Neuro2a cells stably expressing TDP-DiLuc were seeded on 96-well white cell culture plates (Greiner) coated with poly-d-lysine. NanoLuc luciferase assay was performed using Nano-Glo Live Cell Assay System (Promega) according to the manufacturer’s instructions. Luminescence was measured using the SpectraMax Paradigm Multi-Mode Detection Platform (Molecular Devices LLC, San Jose, CA, USA). The relative luminescent intensity was calculated by normalizing the relative luminescence unit using the relative cell viability measured by the MTS assay.
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4

Measuring Cell Viability via MTT Assay

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A modified technique outlined by Mosmann (1983) and Vistica (1991) was used for MTT viability assay [57 (link),70 (link)]. HepG2 cells were seeded at a density of 40,000 cells/mL in a 96-well plate. The cells were left to be attached overnight, then they were exposed at different concentrations (μg/mL) of the samples. The spent medium was aspirated after 24 h of incubation at 37 °C and substituted in simple DMEM by a 0.5 mg/mL MTT. After another 3 h of incubation at 37 °C, the medium was removed and 200 μL DMSO dissolved the purple formazan crystals. A microplate reader (SpectraMax® Paradigm® Multi-Mode Detection Platform, Molecular Devices LLC, San Jose, CA, USA) measured the absorbance at 540 nm.
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5

Biophysical Characterization of DBD Aggregation

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Aggregation was assessed using light scattering and ThT fluorescence. Light scattering experiments were performed on a K2 Multifrenquency Phase spectrofluorometer set at 500 nm for excitation and emission (excitation slit width 0.5 mm, emission slit width 0.5 mm). DBD samples of 2 μM in 50 mM sodium phosphate pH 7.0, 100 mM NaCl and 2 mM DTT were stirred continuously at 37 °C during the experiments. Detection of amyloid aggregates was performed by measuring ThT fluorescence at 480 nm upon excitation at 440 nm, using a SpectraMax Paradigm Multi-Mode Detection Platform (Molecular Devices) with temperature maintained at 37 °C. Time-resolved fluorescence was recorded immediately after adding 5 μM protein to pre-equilibrated buffer containing 20 μM ThT.
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6

Comparative Cell Proliferation Assay

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HEK293T (CRL-11268, ATCC) and Hela (CCL-2, ATCC) cells were cultured in high-glucose DMEM (D5796; Sigma) supplemented with 5% FBS (Gibco) and 1% penicillin–streptomycin (Fujifilm Wako Pure Chemical Corporation), at 37 °C in a humidified atmosphere containing 5% CO2. To compare cell proliferation, WT HEK293T cells and a series of knockout cells were seeded into 96-well plates (4.0 × 103 cells per well). Each day, a 1/10th volume of 1 mM resazurin solution in PBS was added to each well, and the cells were incubated for 3 h. The fluorescence of reduced resazurin was measured using a fluorescence microplate reader (SpectraMax Paradigm MultiMode Detection Platform; Molecular Devices) with excitation/emission at 560/590 nm.
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7

Dietary Effects on Metabolic Markers

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After four weeks of adaptation, animals were randomly divided into five groups (diets) of 10 animals (five per cage), with food supplied ad libitum. Initial parameters including weight, body length and fasting glucose levels were measured. The mice were inspected for diabetes daily using test strips for rapid determination of glucose in urine (Machenery-Nagel, Duren, Germany). In addition, glucose blood testing was performed approximately every two weeks during the experiment. Mice were considered diabetic if they had a urine glucose value above 150 mg/dL and a fasting blood glucose level of over 130 mg/dL [30 (link)]. The experimental diets lasted for 72 days, after which blood insulin, glucose, and cholesterol levels were measured after overnight fasting. In addition, IFN-γ and IL-10 levels were measured [28 ] using ELISA kits (Wuhan EIAab Science, Wuhan, China) according to the manufacturer’s instructions. Standard curves were generated for each plate to determine sample concentration. Absorbance was determined using SpectraMax Paradigm multi-mode detection platform (Molecular Devices, Sunnyvale, CA, USA) and data were analyzed using GraphPad Prism software (version 6; GraphPad Software, La Jolla, CA, USA).
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8

Growth Rate Measurement of Yeast Genotypes

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Single colonies of each genotype were inoculated in YAPD and incubated for approximately 20 hours at 30°C. The OD600nm of each culture was measured using a Nanodrop 2000C (Thermo Fisher Scientific). Cells of each genotype were then diluted to an OD600 of 0.01 in a total volume of 200 μl in YAPD in Falcons 96-well plate (reference no. 353075). Quadruple biological replicates were used for each genotype with wells of YAPD as blanks. Growth rate was measured using Molecular Devices’ SpectraMax Paradigm Multi-Mode detection platform with the SoftMax Pro 6.3 software. Measurements at 600 nm were taken at every 15-min interval for 24 hours at 30°C and set to orbital shaking at medium intensity for 20 s before the first and between each read. Raw numbers were extracted for data analysis.
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9

RNA/DNA-Binding Affinity of RBM45 by FP

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Fluorescence polarization (FP) analysis was used to detect the RNA/DNA-binding affinities of RBM45RRM1–2 and its mutants. The FAM-labeled RNA or DNA at 100 nM was incubated with increasing amounts of RBM45RRM1–2 or its mutants in the binding buffer containing 10 mM Tris-HCl, 200 mM NaCl, 1 mM DTT, 1 mM EDTA and 5% (v/v) glycerol for 30 min at room temperature. The 535 nm fluorescence polarization measurements were carried out at 25°C on a SpectraMax Paradigm Multi-Mode detection platform (Molecular Devices, USA), with an excitation wavelength of 485 nm.
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10

HuH-7 cell viability assay

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HuH-7 were plated at 2 x 104 cells/well density on 96-well plate and incubated at 37°C and 5% CO2 for 12 h. After that, cells were infected as described above. Cell viability was evaluated by CellTiter-Blue (Promega) according to manufacturer’s instructions. The fluorescence was measured at SpectraMax Paradigm Multi-Mode Detection Platform (Molecular Devices).
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