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23 protocols using lc 6ad pump

1

Spectroscopic analysis of natural compounds

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Specific rotations were measured by an SGW-1 automatic polarimeter (Shanghai Jing Ke Industrial Co., Ltd., Shanghai, China). The NMR spectra were recorded on a Bruker Avance III HD-400 NMR spectrometer. HRESIMS spectra were obtained on a Waters Xevo G2 Q-TOF spectrometer fitted with an ESI source (Bruker Corporation, Karlsruhe, Germany). Semi-preparative high-performance liquid chromatography (HPLC) was undertaken on a Shimadzu LC-6AD pump (Shimadzu Co., Kyoto, Japan) using a UV detector, and a YMC-Pack ODS-A HPLC column (semipreparative, 250 × 10 mm, S-5 μm, 12 nm, YMC Co., Ltd., Kyoto, Japan) was used for separation.
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2

HPLC Analysis of PD Concentrations

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HPLC was performed at room temperature. Regarding the apparatus, a Shimadzu LC-6AD pump was used with a Shimadzu SPD-10AV VP UV-VIS detector set at a wavelength of 246 nm and Shimadzu C-R7A plus Chromatopac (Kyoto, Japan). A YMC Pack ODS-AM column (I.D. of 6 mm, length of 150 mm; YMC Co., Ltd., Kyoto, Japan) was used as the analytical column. A mixture of acetonitrile and 50 mM citrate buffer with pH adjusted to 4.1 with phosphoric acid (35:65, v/v) was used as the mobile phase. The flow rate was set at 1 mL/min with an injection volume of 20 μL. PD concentrations were assessed using an absolute calibration curve.
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3

Spectroscopic Characterization of Natural Products

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Optical rotations were recorded in MeOH on a Perkin-Elmer 343 spectropolarimeter. UV spectra and ECD spectra were obtained simultaneously on a Chirascan CD spectrometer (Applied Photophysics Ltd., England) using MeOH as solvent. 1H NMR, 13C NMR, and 2D NMR data were recorded on a Bruker Avance III 500 MHz spectrometer with TMS as internal standard. HRESIMS data were recorded on a Bruker maXis Q-TOF spectrometer. Preparative HPLC were carried out with a Shimadzu Shim-packed Pro-ODS column (20 mm × 25 cm) equipped with a Shimadzu LC-6AD pump and a Shimadzu RID-10A refractive index detector. UPLC analysis was performed on an Acquity H-Class UPLC system consisting of a quaternary solvent delivery system, an auto-sampler, and a DAD detector. For column chromatography, silica gel 60 (100–200 mesh, Qingdao Marine Chemical Ltd., Qingdao, People's Republic of China), YMC ODS (75 μm, YMC Co. Ltd., Kyoto, Japan) and Sephadex LH-20 (GE Healthcare, Uppsala, Sweden) were used. Analytical TLC were performed on HSGF254 silica gel plates (0.2 mm, Yantai Jiangyou silica gel Development Co. Ltd., Yantai, China); spots were visualized after spraying with 10% H2SO4 solution followed by heating.
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4

Mucin Disk-Based In Vitro Release Assay

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Mucin disks were prepared using the method of Tsuchiya et al. [25 ]. Four-hundred microliters of 10% mucin solution was spread on a 25-mm diameter filter paper. The filter paper was dried at room temperature for 24 h. An artificial saliva solution (pH 6.8) consisting of 0.8% NaCl, 0.019% KH2PO4, and 0.238% Na2HPO4 was prepared. The mucin disk was moistened with artificial saliva, and 3 mg of IM bulk powder or the IM microparticles were mounted on the mucin disk, and the mucin disk was dried at room temperature for 5 min. Each mucin disk with sample was fixed to a slide glass with a clip and immersed in 150 mL of artificial saliva at 37 °C and incubated with shaking at 50 rpm. Mucin disks were taken out at 5, 10, and 15 min and the amount of IM remaining on the disk was measured using high-performance liquid chromatography (HPLC). The HPLC system consisted of an LC-6AD pump (Shimadzu Corporation, Kyoto, Japan) and a Chromato-PRO (Run Time Corporation, Tokyo, Japan) equipped with a Capcell Pak C18 MG II column (4.6 × 250 mm, OSAKA SODA CO., LTD., Osaka, Japan) and an SPD-20AV UV detector (Shimadzu Corporation). Chromatography was carried out at 40 °C. The mobile phase comprised 60% (v/v) acetonitrile in 0.02 M sodium acetate buffer adjusted to pH 3.6 using orthophosphoric acid. The flow rate was 1 mL/min. The detection wavelength was 320 nm.
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5

Comprehensive Analytical Techniques for Natural Product Characterization

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Optical rotations were recorded on an Anton Paar MCP 200 polarimeter. UV spectra were measured on a Shimadzu UV-2201 spectrometer. ECD spectra were obtained on a Bio-Logic MOS 450 spectrometer. IR spectra were measured on a Bruker IFS-55 spectrometer. 1D and 2D NMR spectra were acquired on Bruker AV-400 or AV-600 NMR spectrometers. Mass spectra were measured on Bruker micrOTOFQ-Q mass spectrometer. Single-crystal X-ray diffraction data was collected on a Rigaku Saturn 724 CCD diffractometer. Column chromatography (CC) were performed with D101 macroporous adsorption resin (D101 MAR), silica gel, ODS, and Sephadex LH-20. Semipreparative HPLC was performed with YMC ODS column, and the HPLC system was equipped with a Shimadzu SPD-20A UV–vis detector and LC-6AD pump.
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6

Characterization of Organic Compounds

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The reaction progress was monitored using thin-layer chromatography (TLC) on silica gel 60 F254 (0.25 mm, Merck, Darmstadt, Germany). Column chromatography was performed using silica gel 60 (0.04–0.063 mm, Merck). Melting points were determined using a Yanaco (Tokyo, Japan) micro-melting-point apparatus without correction. HPLC was performed using an EYELA Preparative LC system [VSP-3050 pump, UV-9000 spectrometric detector, LiChrosorb RP-18 column (10 μm, 25 mm × 300 mm)] (Tokyo Rikakikai Co. Ltd., Tokyo, Japan) and a Shimadzu LC system [LC-6 AD pump, SPD-20A UV spectrometric detector, Mightysil RP-18 column (5 μm, 20 mm × 250 mm)] (Kyoto, Japan). The NMR spectra were recorded with a JEOL JNM-LA400 spectrometer (Tokyo, Japan). The chemical shifts were expressed in ppm, downfield from TMS. The mass spectra were collected using a JEOL JMS-SX102A mass spectrometer (Tokyo, Japan).
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7

Extraction and Fractionation of Bioactive Compounds

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petroleum ether, CHCl3, EtOAc, and n-BuOH were used to extract the culture filtrate of HN09 sequentially three times to generate dried petroleum ether-soluble (29.87 g), CHCl3-soluble (16.03 g), EtOAc-soluble (30.6 g), and n-butyl alcohol-soluble (80.15 g) extracts. The EtOAc-soluble extract was subjected to passage over a silica gel column (100–200 mesh) which was eluted with CHCl3-methanol mixtures of increasing polarities (100:0–90:10–80:20–70:30–60:40–50:50, v/v). A total of 10 fractions (E1-E10) were obtained. Fraction E4 (7.4 g), which was obtained by elution with CHCl3–MeOH (80:20), was rechromatographed on a Develosil ODS (10 μm, Nomura Chemical Co. Ltd., Japan) column. Moreover, 16 subfractions (E4–1–E4–16) was obtained by eluting Fraction E4 with MeOH–H2O mixtures (3:7, 1:1, and 7:3). preparative HPLC was used to separate the subfraction E4–1, which was run with a Shimadzu RID-10A refractive index detector and a Shimadzu LC-6 AD pump by taking a YMC-pack ODS-A C18 column (5 μm, 250 × 20 mm) and MeOH-water mixture (7:93, v/v) as the mobile phase to generate B16 (2.86 g) and B17 (1.76 g).
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8

Enzymatic Synthesis of Glycosylated Compounds

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Scale-up reactions have a total volume of 60 mL, containing 100 μg/mL purified UGT109A1, 25 mM Tris-HCl (pH 8.0), 10 mM substrate dissolved in DMSO, and 50 mM UDPG. The reactions were performed at 37 °C for 12 h and terminated by adding 60 mL methanol. Then, the reactants were evaporated under reduced pressure distillation. The remaining residues were resuspended in 5.0-10.0 mL methanol, filtered by a 0.22 μm filter, and then purified by semi-preparative HPLC. Semi-preparative HPLC was performed on an HPLC system equipped with a Shimadzu LC-6AD pump and a Shimadzu SPD-20A prominence UV-VIS detector (Shimadzu Corporation, Kyoto, Japan) using a C18 column (10 mm × 250 mm, 5 μm particles, CAPCELL PAK, Japan). The HPLC conditions are described in detail in Supplementary Information Table S7.
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9

Comprehensive Analytical Techniques for Natural Product Characterization

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The HR-ESI-MS data were obtained on an Agilent 6520B Q-TOF spectrometer. The optical rotation was determined on a JASCO P-1020 polarimeter. Analytical HPLC measurements were conducted on a Shimadzu LC-20AT pump with a Shimadzu SPD-20A UV-Vis detector, using a ZORBAX SB-C18 column (250×4.6 mm, 5 μm). Semi-preparative HPLC separation was performed on a Shimadzu LC-6AD pump with a Shimadzu SPD-20A UV-Vis detector, using a ZORBAX SB-C18 column (250×9.4 mm, 5 μm). NMR spectra were recorded on a Bruker ACF (300 and 500 MHz) spectrometer with deuterated solvent signals used as internal standards. Column chromatography was conducted on MCI gel (75–150 μm; Mitsubishi Chemical Corp., Tokyo, Japan), ODS (PrePAK-500/C18, YMC) and Sephadex LH-20 (20–100 μm, Pharmacia, U.S.A.) columns.
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10

Analytical Techniques for Spectroscopic Characterization

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Optical rotations were obtained on a Perkin-Elmer 343 spectropolarimeter. UV measurements were performed with a Perkin EImer Lambda 650 UV/vis spectrometer. CD data were collected by a Jasco J-810 CD spectrometer (Jasco Inc., Japan). 1H NMR, 13C NMR, and 2D NMR spectra were recorded on a Bruker Avance DRX 500 or Bruker DRX-400 instrument with TMS as a reference. ESIMS data were obtained on an MDS SCIEX API2000 LC/MS/MS instrument. HRESIMS data were collected on Bruker Bio TOF IIIQ mass spectrometer. Preparative HPLC was performed with a Shimadzu LC-6AD pump and a Shimadzu RID-10A refractive index detector using an YMC-pack ODS-A column (5 μm, 250 mm × 20 mm). For column chromatography (CC), silica gel 60 (100–200 mesh, Qingdao Marine Chemical Ltd., Qingdao, China), polyamide (60–100 mesh, Taizhou Luqiao Si-jia Biochemical Plastic Company, Zhejiang, China) and Sephadex LH-20 (GE Healthcare, Uppsala, Sweden) were used. Cytotoxic assays were performed with a Genois microplate reader (Tecan Group, Männedorf, Zürich, Switzerland). Spore germination percentages were determined using a B203LED optical microscope (Chongqing Optec instrument Co. Ltd., Chongqing, China).
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