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Acquity pda detector

Manufactured by Waters Corporation
Sourced in United States

The Acquity PDA detector is a high-performance photodiode array detector used in liquid chromatography systems. It provides accurate and reliable detection of a wide range of analytes across the UV-VIS spectrum. The detector features a fast sampling rate, high sensitivity, and advanced data processing capabilities to support a variety of analytical applications.

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23 protocols using acquity pda detector

1

Analytical Characterization of Organic Compounds

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All solvents and reagents were used as received from commercial suppliers, unless noted otherwise. The compounds were named using the Biovia Draw 2016 package (IUPAC).
NMR spectra were recorded on a Bruker Avance III HD 500 MHz or 250 MHz spectrometer.
The chemical-shifts (δ) reported are given in parts per million (ppm) and the coupling constants (J) are in Hertz (Hz). The spin multiplicities are reported as s = singlet, d = doublet, t = triplet, q = quartet, dd = doublet of doublet, ddd = doublet of doublet of doublet, dt = doublet of triplet, td = triplet of doublet, and m = multiplet.
uPLC-MS was performed on a Waters Acquity UPLC system coupled to a Waters Acquity PDA detector, an ELS detector and an MSD (Scan Positive: 150–850). Method (pH 3): Phenomenex Kinetix-XB C18 (2.1 x 100 mm, 1.7 μm) column. Elution with a linear gradient of Water + 0.1% Formic acid and Acetonitrile + 0.1% Formic acid at a flow rate of 0.6 mL/min. Chiral SFC analysis: Waters Thar 3100 SFC system connected to Waters 2998 PDA detector, Chiralcel OD-H 25 cm. Chiral SFC separation: Water Thar SFC system with a Waters Thar FDM pump, Waters Thar Alias autoinjector, Waters Thar fraction collector and a Waters 2998 PDA detector.
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2

ABTS+ Radical Scavenging Assay for Antioxidant Evaluation

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The ABTS+ cation radical method was used to determine the antioxidant activity of the extracts. A 2 mm ABTS+ stock solution containing 3.5 mM potassium sulfate (VI) was prepared by diluting the stock solution eight times in methanol and incubating it overnight at room temperature in the dark to allow radical stabilization. An Acquity UPLC liquid chromatography system (Waters, Milford, MA, USA) with a Waters Acquity PDA detector (Waters, Milford, MA, USA) and an Acquity UPLC® BEH C18 column (150 mm × 2.1 mm, particle size 1.9 μm) (Waters, Dublin, Ireland) were used. The gradient started with A0.1% aqueous formic acid solution in acetonitrile and B0.1% aqueous formic acid (10:90, %, v/v to 40:60, %, v/v) for 15 min. The chromatogram was recorded at a 280 nm wavelength. The injection volume of the sample was 10 µL, and the flow rate was 0.4 mL/min. After running through the column, the UPLC elution returned to baseline. The sample was then re-injected with ABTS+. This time, the chromatogram was recorded at a 734 nm wavelength. The antioxidant activity was calculated from the difference in peak areas of both chromatograms and compared with the standard curve for TROLOX. Each commercial compound standard was obtained from Sigma (St. Louis, MO, USA). The obtained results were converted into 1 g of extract [27 (link),28 (link),29 (link)].
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3

Comparative Characterization of Avastin and Biosimilar

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Avastin® (AVT/AVT08, Genentech, San Francisco, CA, USA, Lot: 33808339) and SIMAB054 (produced by ILKO ARGEM Biotechnology R&D Center, Istanbul, Turkey) samples were diluted to 9.4 mg/mL with ultrapure distilled water and injected into the HPLC directly. CEX separation was performed on BioPro SPF Non-porous Column (5 µm, 100 × 4.6 mm, YMC). Mobile phase A:100 mM NaH2PO4·2H2O (Merck), mobile phase B:100 mM Na2HPO4·2H2O (Merck, Kenilworth, NJ, USA), and mobile phase C:1 M NaCl (Merck) were prepared with mass spectrometry (MS) grade water. Auto Blend method was used to perform a salt gradient from 0 mM to 200 mM sodium phosphate at constant pH of 5.7. The flow rate was 0.5 μL/min, and the column temperature was 25 °C. Detection was achieved using a PDA detector (Waters, ACQUITY PDA Detector) at 280 and 214 nm wavelengths. Raw data were processed by EMPOWER Software. The acidic and basic variants of AVT and SIMAB054 in CEX analysis were collected by fraction manager equipment in the HPLC system. Samples were loaded to HPLC at high concentration to get high yield fractions. The method was adapted from Ref. [36 (link)].
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4

UPLC-PDA Analysis of Ampicillin

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AMP was assayed with a previously validated method [23 (link)] using an ACQUITY UPLC H-Class System (Waters; Milfors, MA, USA) with ACQUITY PDA detector (Waters; Milfors, MA, USA). The column used was ACQUITY® BEH C18 column (2.1 × 50 mm, 1.7 μm, Waters) at a temperature of 30 °C with a VanGuard 2.1 × 5 mm (Waters; Milfors, MA, USA) pre-column. The separation was achieved using a gradient elution composed of ammonium formate 20 mM pH = 6.5 (mobile phase A) and methanol/acetonitrile (75:25) (mobile phase B) with the gradient applied at a constant flow of 0.35 mL/min (Table 1). The detection wavelength was 225 nm. Data were collected and processed with Empower 3 Software (2002–2019 Waters; Milfors, MA, USA) Application Manager.
At each study time, the first 1 mL of the AMP solution from EIPs was discarded, and another 2 mL was collected on ice for analytical determination. Collected samples were accurately diluted 1:100 with cold LC-MS-grade water. Injection volume was set to 1 μL and injections were performed in triplicate.
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5

UPLC Measurement Analysis Protocol

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UPLC conditions for measurement analysis were: Waters Acquity™, PDA detector; column, Acquity UPLC BEH C18 column (50 × 2.1 mm ID 1.7 μM, Waters, Milford, MA, USA); mobile phase A, 100% water; mobile phase B, 100% Acetonitrile; gradient, 0–0.5 min—0% B, 0.5–1.0 min—0–20% B, 1.0–3.0 min—20–95% B, 3.0–3.5 min—95% B, 3.5–3.6 min—95–0% B, 3.6–4.0 min—0% B; flow, 0.50 mL/min; column temperature, 60 °C.
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6

HPLC Analysis of Proanthocyanidins

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According to the method from our previous study with appropriate modifications [22 (link)], the conditions were as follows: The samples were separated on a C18 column (5 μm, 250 × 4.6 mm) at a temperature of 25 °C and a pressure of 10.2 MPa. The eluents were composed of phosphoric acid/water (solvent A) (1/1000, v/v) and acetonitrile (solvent B). The mobile phase gradient was as follows: 0–25 min, linear gradient from 90% A to 75% A; 25–28 min, isocratic 90% A. The flow rate was 1 mL/min. Proanthocyanidin B1, B2, B3, A1, A2, and C1 were detected at 280 nm using a Waters Acquity PDA detector (Waters Corporation, Manchester, UK). The chromatograms were integrated by employing EMPOVER software (Waters Corporation, Manchester, UK). The standard curve lines of pure proanthocyanidins were used to quantify the peaks of the digested samples.
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7

UHPLC Quantification of Cysteamine and Cystamine

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The quantification of cysteamine and cystamine in the compounded formulations was analyzed by ultra-high-performance liquid chromatography (UHPLC) using a modified version of the method proposed by Kim et al. [38 (link)]. The analysis was performed with a UHPLC coupled with photodiode array detection (PDA), using an ACQUITY UPLC H-Class System (Waters®) with ACQUITY PDA detector (Waters®).
We employed an ACQUITY® BEH C18 column (2.1 × 50 mm, 1.7 µm, Waters®) at a temperature of 45 °C. The mobile phase was a mixture of aqueous 4 mM sodium 1-heptane sulfonate:acetonitrile in gradient mode, as shown in Table 1. The wavelengths used for the detection of cysteamine and cystamine were 215 nm and 244 nm, respectively. Data were collected and processed with Empower 3 Software (2002−2019 Waters®) Application Manager.
All test samples were diluted 1:50 with 0.1% acetic acid and analyzed by UHPLC, setting the injection volume to 5 µL.
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8

Validating HepG2 Cell Cultures for Mycoplasma-Free Experiments

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HepG2 (ATCC, HB-8065) cells were cultured in 1× DMEM (Fisher Scientific, Cat#MT10013CM) supplemented with 10% FBS (Gibco, Cat#10437028), 1% Penicillin-Streptomycin solution (Gibco, Cat#15140122)) at 37 °C in 5% CO2 in a humidified incubator. All human-derived cell lines were validated by short tandem repeat (STR) profiling using PowerPlex® 16 HS System (Promega) once a month. Additionally, a polymerase chain reaction (PCR)-based method was used to screen for mycoplasma once a month employing the LookOut® Mycoplasma PCR Detection Kit (MP0035, Sigma-Aldrich) and JumpStart™ Taq DNA Polymerase (D9307, Sigma-Aldrich) to ensure cells were free of mycoplasma contamination.
Doxorubicin, NU7441, Samuraciclib (ICEC0942), and EPZ015666 (GSK3235025) were purchased from Selleckchem. All other compounds used for screening were obtained from St Jude compounds deposit. AZD7648, Lot01, was purchased from Chemietek, and the quality was verified by Chemieteck by HPLC-MS and NMR, with purity >99.5%. The purity of AZD7648 was further verified in house by using Waters UPLC-MS system (Acquity PDA detector, SQ detector and UPLC BEH-C18 column). The mass spectrometer was acquired using MassLynx v. 4.1. The chromatographic conditions are as follows: flow rate: 1.0 mL/min, sample injection volume: 2 µL, column temperature: 55 °C, mobile phase: 0.1% formic acid in CH3CN and H2O.
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9

Quantification of Intracellular ATP by UPLC

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The ATP content of the ECs treated with the stated ketone bodies or respective controls for 12 h was measured using the ATPlite Luminescence Assay System (Perkin Elmer), according the manufacturer’s instructions. The assay was run in one 96‐well plate with 8 replicates per condition.
UPLC analysis for the quantification of nucleotides including ATP was performed at the Metabolomics Core Technology Platform of Heidelberg University. 5x106 cells were lysed in 0.37 ml ice‐cold 0.5 M perchloric acid with sonication. After neutralization with 86 µl ice‐cold buffer (2.5 M KOH, 1.5 M K2HPO4) samples were centrifuged (16,400 g for 10 min at 4°C) and filtered (0.2 µm filters). Analysis was done on an Aquity HSS T3 column (Waters) connected to an Acquity H‐class UPLC system. Column temperature was 40°C. Solvent A (50 mM potassium phosphate buffer, 8 mM tetrabutylammonium hydrogensulfate, pH 6.5). The elution gradient was as follows: after 2.6 min, 0% solvent B (acetonitrile in 70% solvent A) to 17 min with 77% solvent B, hold for 1 min at 77% solvent B, followed by return to 0% solvent B and conditioning of the column to initial conditions for 10 min. Nucleotides were detected using an Acquity PDA detector (Waters, 260 nm) and ultrapure standards (Sigma Aldrich).
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10

Determination of Phenolic Content

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The phenolic content of water extracts was determined as the same methodology described by Badr et al., [13 ]. The analysis was performed using an Acquity H class UPLC system equipped with a Waters Acquity PDA detector (Waters, USA). The condition and the column characteristics were the same as described before.
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