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14 protocols using dihydroartemisinin dha

1

Probing Plasmodium falciparum Invasion Dynamics

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Highly synchronized parasites at schizont stages from P. falciparum 3D7 (transgenically expressing secretory SS-EEA1WT-mCherry) were purified using percoll density gradients. Purified schizonts were then allowed to invade fresh batch of red blood cells for 6 h. The resulting intracellular rings were exposed to mock treatment (0.1% DMSO) or the following compounds: wortmannin, LY294002, inactive LY294002 analog LY303511 (from Selleckchem), artemisinin, artesunate or dihydroartemisinin (DHA) (from Sigma-Aldrich) at the indicated concentrations in DMS0 (0.1%). Drug treatments were carried out as indicated for 30 min or 4 h. Cells were subsequently processed for live cell imaging, immunofluorescence assay (IFA) and western blotting. Drugs were removed by washing thrice with serum-free RPMI, and infected erythrocytes were imaged after 1 h. In addition, where indicated parasite growth in culture was monitored 24 h later in Giemsa smears.
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2

Antimalarial Drug Resistance Assay

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The ring-stage survival assays from 0 to 3 h were carried out as previously described with minor modifications [28 (link)]. Briefly, parasites were grown to 40 ml cultures at 5% hematocrit and schizonts were synchronized using a MACS magnet column (Miltenyi Biotec) into 10 ml cultures. Once schizonts had burst and merozoites had reinvaded, 2 ml of culture was transferred to 6 wells of 12-well cell culture cluster plates (Corning) at 2% hematocrit and 2% parasitaemia. Half of the wells were treated with 700 nM dihydroartemisinin (DHA) (Sigma) and the other half of the wells were treated with dimethyl sulfoxide (DMSO) (ThermoFisher). After 6 h all cultures were washed with ICM three times and transferred to a new plate to ensure complete removal of the drug. After an additional 66 h, slides were made on all cultures and 5000 RBCs were counted per culture. Proliferation was measured by the percent parasitaemia in the DHA treated culture over the percent parasitaemia in DMSO treated cultures. Two biological replicates each with three technical replicates were carried out for NHP4026, NHP4076, NHP4333, NHP1337, and NF54. Parasites are considered resistant if the percent proliferation is greater than 5% [13 (link)].
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3

Oral Administration of Dihydroartemisinin

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Dihydroartemisinin (DHA) was obtained from Sigma-Aldrich Co. (St Louis, MO, USA) and stored at − 20 °C. Prior to oral administration, the DHA was dissolved in 20% Tween-80 based on the body weight of the mice (0.1, 1, 5, 10, and 20 mg/kg).
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4

Quantitative Analysis of Parasite Survival

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Two hours post-cytometric quantitation (or 6 h after Percoll synchronization) samples whose stage composition was > 70% rings as determined by flow cytometry were diluted to 2% haematocrit and 0.5% parasitaemia (unless otherwise noted), and 200 μl of culture was aliquoted into 6 wells of a flat bottom 96-well plate. Each treated and untreated sample had three technical replicates: RBC controls were aliquoted into 2 wells at 2% haematocrit and 200 μl. Three wells of parasites and 1 well of the RBC control were treated with 700 nM dihydroartemisinin (DHA) (Sigma-Aldrich); an additional 3 wells of parasites and 1 well of RBC control was treated with 0.02% dimethyl sulfoxide (DMSO) (ThermoFisher) as untreated controls. Parasites were incubated for 6 h, and then washed three times with 150 μl of RPMI to remove drug. Samples were then suspended in CM and placed back in the incubator. Sixty-six hours after drug removal, 20 μl of sample from each well was collected and frozen for qPCR amplification (72 h sample) without any media changes. Plates were then placed back in the incubator for another 48 h, after which 20 μl of sample was again collected and frozen for qPCR amplification (120 h sample).
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5

Gametocyte Drug Sensitivity Assay

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A final 0.02% gametocytemia was used for the drug assay in order to minimize the cost in parasite culture. To determine drug sensitivity of gametocytes, 100 µl of the cultures from day -1 to 11 were diluted in a complete medium with fresh human erythrocytes to a 2% hematocrit and 0.04% gametocytemia, and placed into each test well of 96-well plates prefilled with the test drugs to a final volume of 200 µl and final hematocrit of 1%. Because young gametocytes at day -1 (stressed schizonts) and day 0 could not be separated, gametocytemias were determined by counting with FCM the fluorescent gametocytes in culture, which contained asexual stage parasites. The plates were incubated at 37°C for 48 h. Chloroquine (CQ), PMQ and dihydroartemisinin (DHA) were purchased from Sigma (St Louis, MO, USA), while pyronaridine (PND) was obtained from Kunming Pharmaceutical Co. (Kunming, Yunnan, China). The stock solutions of CQ (100 mM), PMQ (100 mM), and PND (20 mM) were prepared in RPMI 1640, and DHA (143 mM) was dissolved in DMSO. Two-fold serial dilutions of each drug were made in a complete medium, with the concentration range of each drug shown in Table 1. For each parasite isolate and drug concentration, the assay was performed with at least three biological replicates, each with two technical replicates.
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6

Antimalarial Drugs and Chelators Evaluation

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Anti-malarial drugs, pyrimethamine (PYR, MW = 249) and dihydroartemisinin (DHA, MW = 284) were purchased from Sigma-Aldrich Company (St. Louis, MO, USA). DFO (desferrioxamine mesylate or Desferal®, MW = 657) was from the Novartis Pharma, Basel, Switzerland, Chiang Mai. DFP (GPO-L-One® or L1, MW = 139) and DFX (Exjade®, MW = 373) were kindly supplied by the Institute of Research and Development, Government Pharmaceutical Organization, Bangkok, Thailand. SYBR Green I nucleic acid gel-stain (10,000× concentrate in DMSO, Cat. No. S9430) was purchased from Invitrogen, Molecular Probes (Eugene, OR, USA). Calcein acetoxymethyl (CA-AM) was purchased from Invitrogen® Corporation (CA, USA). 2′,7′-Dichlorodihydrofluorescein diacetate (DCFH-DA) and epigallocatechin 3-gallate (EGCG, MW = 458) were purchased from Sigma-Aldrich Company (St. Louis, MO, USA). SYTO® 61 red fluorescent nucleic acid dye (Cat. No. S11343) was purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA).
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7

OCCC Chemoresistance and Ferroptosis Assay

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OCCC lines were stained with CellTrace Violet (CTV - Invitrogen C34571) following the manufacturer’s protocol. Briefly, cells were washed once with PBS and resuspended in PBS at 1×106 cells/ml, followed by staining with 1μl (5mM) of CTV per 1×106 cells for 25 minutes. Cells were then centrifuged and resuspended in fresh complete culture medium.
1×104 CTV-labeled OCCC cells were cultured alone, with 1×104 CD10low enMSCs, or with 1×104 CD10high enMSCs in a 12-well plate. For the chemoresistance assay, Cisplatin was added to the culture medium at 0.5, 1, and 2μg/ml concentrations. For ferroptosis induction assay, erastin (MedChemExpress- HY-15763/CS-1675) or dihydroartemisinin (DHA) (Sigma-Aldrich- D7439) was added to the culture medium at 0.5, 1, 2, 5, 10 μM. The OCCC cell numbers were followed for four days. Cells were collected from 2 wells per condition per day and counted using a hemocytometer. Flow cytometric analysis was used to determine the percentage of the CTV-labeled tumor cell to quantify viable tumor cells per condition. Total OCCC cells (CTV-labeled) = total cell number × CTV positive cell %
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8

Dihydroartemisinin Cytotoxicity Assay Protocol

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RPMI-1640 (Cat# 11875093) and fetal bovine serum (Cat# 10099-141) were purchased from Gibco (Grand Island, NY, USA). Dihydroartemisinin (DHA) was purchased from Sigma Aldrich (Cat# D7439, St. Louis, MO, USA). Antibodies against KDM3A (Cat# ab106456) was purchased from Abcam (Cambridge, London, UK), anti-p21 (Cat# sc-471) , anti-GAPDH (Cat# sc-25778) and anti-β-Actin (Cat# sc-8432) antibodies were purchased from Santa Cruz Biotechnology (CA, USA). Protease inhibitor cocktail was purchased from KeyGen (Cat# KGP603, Jiangsu, China). BCA protein assay kit and enhanced chemiluminescent substrate kit were obtained from Pierce (Cat# 23225, Thermo Scientific, Rockford, IL, U.S.A). Cell Counting Kit-8 (CCK-8) was purchased from Med Chem Express (Cat# HY-K0301, Shanghai, China).
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9

Synthesis and Purification of Myc Inhibitors

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10058-F4, 10074-G5, JQ1 and dihydroartemisinin (DHA) were purchased from Sigma-Aldrich (St. Louis, MO). The 10058-F4 analogs 12Rh and 28Rh, the 10074-G5 analogs 3JC-91-2 and 3JC91-7 and the Myc proteomimetic compound JKY-2-169 [17 ] were all synthesized and purified as previously described [12 (link), 38 (link)].
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10

Dihydroartemisinin Signaling Pathway Assay

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Dihydroartemisinin (DHA) was purchased from Sigma-Aldrich, Inc. (St. Louis, MO, USA), dissolved in DMSO to make a 1000 mM stock solution, and stored at 4°C. The following antibodies were used: β-actin, Cdk4, Cdk6 (Santa Cruz Biotechnology, Carlsbad, CA, USA), VEGF (Abcam Inc., Cambridge, MA, USA), IKKα, MEK1 (Cell Signalling Technology, Inc., Danvers, MA, USA), E2F3, Rac1, E2F1, and CDC42 (Proteintech, Chicago, IL, USA).
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