The largest database of trusted experimental protocols

28 protocols using sphingosine 1 phosphate (s1p)

1

Molecular Regulation of Tissue Fibrosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sphingosine‐1‐phosphate (S1P) was purchased from Enzo Life Science, (USA Cat# BML‐SL140‐000). Sphingosine kinase inhibitor (SK1‐II) was purchased from Tocris (Cat# 2097). LY2109761 was purchased from Sigma Aldrich (Italy, Cat# SML2051). Periodic acid‐Schiff was purchased from Sigma Aldrich (St Louis, USA Cat # 395B‐1KT). TGF‐β was purchase by R&D (USA, Cat #DB100B). Anti‐actin alpha SMA from Sigma Aldrich (Cat # A5228). Anti‐IL33 was purchased from ThermoFisher (Italy Car# AF3626). Anti‐FGF2 was purchased from Santa Cruz Technology (USA Cat# sc‐74412). Diamino‐benzidinic acid system was purchased from Sigma Aldrich (Italy Cat# D3939). OCT medium was purchased from Tissue‐Tek OCT (Pella Inc. Italy, Cat # 27050). High‐capacity cDNA kit and SYBR Green Real‐Time PCR Master Mix were purchased from ThermoFisher Scientific (Monza, Italy Cat # 4368814 and 4385612). CD90 PE mouse/rat and CD326 APC mouse were purchase from a Milteny iBiotec (Bologna, Italy Cat# 130‐094‐528 and #130‐096‐417). TGF‐β1 protein (Cat #ab50036), anti‐wide spectrum Cytokeratin (Cat #ab9377), rabbit anti‐mouse, Vimentin (Cat # ab92547), goat anti‐mouse IgG H&L FITC GtxMu‐003‐D (Cat # ab96885594) and goat anti‐rabbit IgG H&L DyLight (Cat #ab96886) were purchased from AbCAM (Cambridge, UK). Other compounds (e.g., ovalbumin, DAPI, collagenase) were purchased from Sigma Aldrich (Italy).
+ Open protocol
+ Expand
2

Traumatic Brain Injury and Immune Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood samples were collected from tail vein in 1 and 4 h after TBI to assess plasma cortisol and circulating lymphocytes or 4 h after hydrocortisone injection (Sigma, 10 mg/kg) to confirm suppressive effects of cortisol on peripheral leukocytes. In separate groups of mice, TBI was induced as above, immediately followed with i.p. injection of either sphingosine 1-phosphate (S1P) (Enzo Life Sciences, 5 μM/kg) or rolipram (Sigma, 30 μM/kg), and blood samples were collected 1 h later. Cells were pelleted, suspended, and treated with ammonium-chloride-potassium (ACK) buffer to lyse erythrocytes. The cells were then counted and stained with PE-anti-CD3 antibody for T cells, APC-anti-CD19 antibody for B cells, FITC-anti-Ly6G antibody for neutrophils, or PE-Cy7-anti-F4/80 antibody for monocytes, followed by flow cytometry analysis on BD FACSAria.
+ Open protocol
+ Expand
3

Purification and Use of SHH, PUR, S1P

Check if the same lab product or an alternative is used in the 5 most similar protocols
Recombinant SHH (SHH) was purified as previously described [28 (link)]. Purmorphamine (PUR) was purchased from EMD Millipore (#540220) and dissolved in DMSO at 10 mM. Sphingosine-1-phosphate (S1P) was purchased from Enzo Life Sciences (BML-SL140-001) and dissolved in fatty acid-free bovine serum albumin (BSA) at 4 mg/ml. Forskolin (FSK, Cat. #F6886), 3-isobutyl-1-methylxanthine (IBMX, Cat. #I5879), and Pertussis Toxin from Bordetella pertussis (PTX, Cat. #P280) were purchased from Sigma-Aldrich.
+ Open protocol
+ Expand
4

Fibroblast Activation and Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Normal human foreskin fibroblasts (NHDF, Promocell C-123000, lot 0062308), normal human lung fibroblasts (NHLF #2512, Lonza, lot 543644) and normal human cardiac atrial fibroblasts (NHCF, Lonza #2903, lot 214476), were cultivated on gelatin coated plates in complete cell growth medium FBM supplemented with FGM-2 or FGM-3 SingleQuots (Lonza) up to passage 4. Starvation medium was prepared from FBM (Lonza) and contained 0.1% fatty acid free bovine serum albumin (BSA,Calbiochem) and penicillin/streptomycin. Cells were maintained at 5% CO2 and 37°C. Cells were treated with the following stimuli/compounds: TGFβ1 (Peprotech), Rho inhibitor I and Rho activator II (Cytoskeleton), lysophosphatidic acid (LPA), latrunculin B, thrombin, 2-deoxy-D-glucose (Sigma Aldrich) and sphingosine-1-phosphate (S1P, Enzo Life Sciences).
+ Open protocol
+ Expand
5

Angiogenic Signaling Pathway Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sphingosine-1-phosphate (S1P) were obtained from Enzo Life Sciences (BML-SL140). Human VEGF-A and EGF were purchased from R&D system (293-VE) and Sigma (E9644). Antibodies to human CLIC1 (Abcam, ab28722), human CLIC4 (Novus Biologicals, NBP1-85574), tubulin (Sigma, T6074), Phospho-ERK (Cell Signaling Technology, 4370), ERK (Cell Signaling Technology, 4695) were used for immunoblotting. Antibodies to VE-cadherin (Abcam, ab33168), HA (Cell Signaling Technology, C29F4), F-actin (phalloidin, Invitrogen, A12379) were used for immunofluorescence.
+ Open protocol
+ Expand
6

Sphingolipid Signaling Molecules Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Sphingosine 1-phosphate, and D-erythro (S1P) were purchased from Enzo Life Sciences (Plymouth Meeting, PA). C17-Sphingosine 1-phosphate (C17-S1P), lysophosphatidic acid (LPA), lysophosphatidylserine (LPS), lysophosphatidylinositol (LPI), and VPC23019 were purchased from Avanti Polar Lipids Inc (Alabaster, AL). Pertussis toxin (PTX) was obtained from Wako Pure Chemical Industries (Osaka, Japan).
S1P, LPA, LPS and LPI were dissolved in methanol. Just before use, the methanol was evaporated and the reagents were resolved in PBS containing 0.4% fatty acid-free BSA (Sigma-Aldrich Co., St. Louis, MO). C17-S1P was dissolved in methanol. VPC23019 and PTX were dissolved in DMSO.
+ Open protocol
+ Expand
7

Ceramide-Induced Cell Death Mechanisms in SH-SY5Y Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
SH-SY5Y cells were treated with cell-permeable, biologically active ceramide, C2-ceramide, at a 10 to 50 μM concentration for various times up to 24 h. In most of the experiments, the cells were treated with the following compounds: PJ-34 (20 μM), PARP-1 inhibitor; α-pifithrin (20 μM), p53 inhibitor; cyclosporine A (2 μM), inhibitor of the permeability transition pore; UO126 (1 μM), ERK1/2 kinase inhibitor; SP600125 (5 μM), JNK kinase inhibitor; sphingosine-1-phosphate (1 μM), LY294002 (50 μM), PI3-K inhibitor and Z-DEVD-FMK (100 μM), caspase-3 inhibitor added 1 h before incubation with C2-ceramide (25 μM). Our data showed that most of these compounds had no effect on cell viability in the control condition, with the exception of PARP-1 inhibitor, JNK kinase inhibitor and PI3-K inhibitor, which significantly decreased SH-SY5Y cell survival (by about 20 %, PJ-34, SP600125; 35 %, LY294002). The above-mentioned compounds were purchased from the following: C2-ceramide and sphingosine-1-phosphate from Enzo Life Sciences, LY294002 from Cell Signalling Technology, PJ-34, α-pifithrin, SP600125, U0126 and cyclosporine A from Sigma-Aldrich, Z-DEVD-FMK from Tocris Bioscence.
+ Open protocol
+ Expand
8

Preparation and Administration of S1P

Check if the same lab product or an alternative is used in the 5 most similar protocols
S1P (Enzo Life Sciences) was prepared according to the manufacturer’s instructions. Briefly, S1P was dissolved in methanol (0.5 mg/ml) and aliquoted, followed by evaporation of the solvent under a stream of nitrogen to deposit a thin film on the inside of the tube. Prior to use, the aliquots were resuspended in PBS with 4 mg/ml bovine serum albumin (BSA) to a final concentration of S1P at 500 μM. The S1P or the vehicle was i.p. injected into the mice at a dosage of 200 μl per mouse immediately after TBI.
+ Open protocol
+ Expand
9

IgE Measurement and Modulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Dinitrophenyl- (DNP-) specific mouse IgE was a generous gift from Dr. Daniel Conrad (VCU, Richmond, VA). DNP-human serum albumin (HSA) and ionomycin were obtained from Sigma-Aldrich (St Louis, MO). S1P was purchase from Enzo Life Sciences (Farmingdale, NY). JTE-013 and CYM-5442 were purchased from Tocris/Bio-Techne (Minneapolis, MN).
+ Open protocol
+ Expand
10

Stimulation of Lipid Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown on standard cell culture plates in RPMI 1640 medium supplemented with 10% FBS until ∼80% confluent. Cells were serum‐starved for 24 h in serum‐free RPMI 1640 medium, then incubated with 10 μM 18:1‐LPA (Echelon Biosciences, UT), 10 μM S1P (Enzo Life Sciences, NY), and/or 1 μM TUG‐891 (Millipore Sigma, MO) for the indicated times. LPA and S1P were delivered as 1000X stock solutions prepared in 4 mg/mL fatty acid‐free BSA. Sources for other species of LPA were: 18:0‐LPA (Avanti Polar Lipids), 18:2‐LPA, and 18:3‐LPA (Echelon Biosciences, UT). Cells were rinsed twice with ice‐cold phosphate‐buffered saline (PBS), harvested by scraping into 1 mL ice‐cold PBS, collected by microcentrifugation for 10 min at 4°C, and resuspended in ice‐cold lysis buffer (20 mM HEPES [pH = 7.4], 1% Triton X‐100, 50 mM NaCl, 2 mM EGTA, 5 mM β‐glycerophosphate, 30 mM sodium pyrophosphate, 100 mM sodium orthovanadate, 1 mM phenylmethylsulfonyl fluoride, 10 μg/ml aprotinin, and 10 μg/ml leupeptin). Insoluble debris was removed following microcentrifugation. Protein concentrations of the supernatant “whole‐cell extracts” were determined using a bicinchoninic acid assay (Pierce).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!