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16 protocols using cd62l clone mel 14

1

Multiparametric Flow Cytometry Immunophenotyping

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Fluorochrome-conjugated mAb directed against specific antigens and isotype-matched control antibodies were purchased from BD Pharmingen (San Diego, CA): CD62L (clone MEL-14, fluorophore BV510), BioLegend (San Diego, CA): CD11b (M1/70, BV421), CD3 (17A2, PE), CD8a (53-6.7, Alexa Fluor 488), CD4 (RM4-5/GK1.5, BV605 and BV785), CD44 (IM7, PerCP/Cy5.5), CD45 (30-F11, PE/Cy7 and PE/Dazzle™), CX3CR1 (SA011F11, BV605), Ly-6G (1A8, BV510), Ly-6C (HK1.4, PerCP/Cy5.5), CD69 (H1.2F3, BV711), CD103 (2E7, APC), PD-1 (29F.1A12, PE/Cy7), CD49a (HMα1, APC), and CD127 (A7R34, BV421).
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2

Flow Cytometry Analysis of Immune Cells

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Single-cell suspensions were washed and stained with Fixable Near-IR Dead Cell Stain Kit (Thermo Fisher, L10119) followed by staining of extracellular antigens with fluorochrome labeled antibodies. The Fixation/Permeabilization Solution Kit (BD Biosciences, 554714) was used for exposing cytoplasmic antigens. Fluorochrome-labeled antibodies against mouse antigens was used in different combinations. CD44 (clone IM7), CD45.1 (clone A20), CD45.2 (clone 104), CD8 (clone 53–6.7), CTLA-4 (clone UC10-4F10-11), were purchased from BD Biosciences. CD62L (clone MEL-14), and ICOS (clone C398.4A) were purchased from BioLegend. Anti-mouse Granzyme B (clone GB12) was purchased from Thermo Fisher. Cell counting was performed with CountBright Absolute Counting Beads (Thermo Fisher, C36950). Samples were processed in a FACSCanto II flow cytometer (BD Biosciences). Data analysis was performed with FlowJo, version 8.8.7 (Tree Star).
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3

Influenza Vaccine Formulations and Immunological Analysis

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The following influenza vaccine formulations were purchased from Moore Medical: FluMist Quadrivalent, 2014–2015, live-attenuated vaccine (MedImmune) and Fluzone Quadrivalent, 2014–2015, inactivated virus vaccine (Sanofi Pasteur) directed against A/California/7/2009 (H1N1)pdm09, A/Texas/ 50/2012 (H3N2), B/Massachusetts/2/2012, and B/Brisbane/60/2008; and 2015-2016 FluMist Quadrivalent and Fluzone Quadrivalent formulations directed against A/California/7/2009 (H1N1)pdm09, A/ Switzerland/9715293/2013 (H3N2), B/Phuket/3073/2013, and B/Brisbane/60/2008 strains. Fluorescently conjugated antibodies for Thy1.2 (clone 53-2.1, BioLegend), CD4 (clones RM4-5, BD Biosciences, and GK1.5, eBioscience), CD8 (clone 53-6.7, BioLegend), CD44 (clone IM7, BioLegend), CD62L (clone MEL- 14, BioLegend), CD69 (clone H1.2F3, eBioscience), and CD103 (clone 2E7, eBioscience) were purchased. The influenza NP–specific (NP366–374) H-2Db tetramer was purchased from MBL International. FTY720 was purchased from Cayman Chemical Company.
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4

Comprehensive Flow Cytometry Panel for Mouse T Cells

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Flow cytometry monoclonal antibodies against mouse antigens (CD4, clone RM4-5; CD8a, clone 53–6.7; CD62L, clone MEL-14; IFN-γ, clone XMG1.2; IL-2, clone JES6-16E3; Ifnar1, clone MAR1-5A3; PD-1, clone RMP1-30; T-bet, clone 4B10) were obtained from Biolegend. Tim-3 monoclonal antibody (clone 5D12) was a gift from V. Kuchroo. Carboxyfluorescein succinimidyl ester (CFSE) was obtained from Biolegend. The following recombinant cytokines and antibodies were used for in vitro T cell cultures: mIFN-β (PBL InterferonSource, indicated concentrations), mIL-12 (R&D Biosystems, 10 ng mL-1), mIL-2 (Miltenyi, 5 ng mL-1), hTGF-β (Miltenyi, 3 ng mL-1), mIL-6 (Miltenyi, 20 ng mL-1), mIL-23 (R&D Biosystems, 20 ng mL-1), anti-mIL-4 (BioXCell; clone 11B11, 10 μg mL-1), anti-CD3 (eBioscience; Functional Grade Purified, clone 145-2C11, 2 μg mL-1), anti-CD28 (Biolegend; LEAF-purified, clone 37.51, 2 μg mL-1). Western blotting primary antibodies were obtained from BD Transduction Laboratories (Stat1, clone 42/Stat1, dilution 1:1000; Stat1 pY701, clone 14/P-STAT1, dilution 1:1000; Stat4 pY693, clone 42/Stat1, dilution 1:500), Cell Signaling (Stat4, clone C46B10, dilution 1:500) or Millipore (GAPDH, mAb374, dilution 1:1000). Anti-mouse or-rabbit secondary antibodies were obtained from Jackson Immunoresearch and were used at 1:10000.
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5

Multiparametric Flow Cytometry of Immune Cells

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At indicated time points post-infection, the spleen and mesenteric lymph nodes from male and female mice were collected and mechanically disrupted to obtain a single-cell suspension. RBC lysis buffer from BioLegend (catalog # 420301) was used to remove erythrocytes. Afterward, the cells were washed and incubated with TruStain fcX (CD16/CD32, Clone 93, BioLegend, catalog # 101320) to prevent non-specific binding, and the immune cells of interest were then stained with appropriate surface antibodies. The samples were subjected to analysis using a BD LSRFortessa flow cytometer in combination with FlowJo software (BD Biosciences). The following mouse antibodies, in various fluorochrome combinations, were utilized for the staining: CD4 (clone GK1.5, BioLegend, catalog #100412, #100406), CD8a (clone 53-6.7, BioLegend, catalog, #100707 #100711), CD11a (clone M17/4, BioLegend, catalog # 101106), CD62L (clone MEL-14, BioLegend, catalog #104438), CD49d (clone R1-2, BioLegend, catalog #103618).
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6

Multiparametric Flow Cytometry Analysis

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Fluorescently labeled monoclonal antibodies against the following mouse antigens were used: CD3 (clone 145–2 C11, BD Biosciences), CD4 (clone RM4-5, BioLegend), CD8a (clone 53–6.7, BioLegend), CD8b (clone YTS156.7.7, BioLegend), CD11a (clone M17/4, eBioscience), CD127 (clone A7R34, Thermo Fisher), KLRG-1 (clone 2F1, Thermo Fisher), CD44 (clone IM7, BioLegend), CD49a (clone Ha31/8, BD Biosciences), CD62L (clone MEL-14, BioLegend), CD69 (clone H1.2F3, BD Biosciences), CD38 (clone 90, Thermo Fisher) and CD103 (clone 2E7, Thermo Fisher). Cells were stained according to our previously published protocol.33 (link) 7-AAD (A1310, Invitrogen) staining was used to exclude dead cells. E7-specific CD8+ T cells were quantified using MHC class I tetramers for the RAHYNIVTF epitope. Flow cytometric acquisition was performed on a BD Fortessa flow cytometer (BD Biosciences).
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7

Multicolor FACS Analysis of Immune Cells

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Antibodies directed against murine CD3 (clone 145-2C11, Biolegend), CD4 (clone RM4-5, Biolegend), CD8 (clone 53-6.7, Biolegend), NK1.1 (clone PK136, Biolegend), CD62L (clone MEL-14, Biolegend), CD44 (clone IM7, Biolegend), and CD19 (clone 6D5, Biolegend) were used in multicolor FACS analysis. Samples were washed and resuspended in cold flow cytometry staining buffer (1% BSA/PBS); stained for 30 min in the dark before a final wash and acquisition. All samples were acquired on a BD Fortessa Flow cytometer running FACS DIVA software. Analysis was performed using FlowJo X software (TreeStar; OR, United States).
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8

Isolation and Characterization of Immune Cells from IKKβ Liver

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ELSs were dissected under binocular from IKKβ(EE)Hep livers and digested for 30 minutes in 500µl digestion buffer (HBSS with 0.2 mg/ml collagenase IV and 0.1 mg/ml DNase1) at 37°C with gentle agitation. The cells were strained through 40µm filter by washing with cold DMEM, centrifuged for 15 minutes, RBCs were lysed for 10 minutes at 25° with erythrocytes lysis buffer, washed again and resuspended in 0.5ml DMEM and kept on ice for a few hours until staining. Viability of isolated immune cells was around 85% as determined by Trypan blue. Cells were resuspended and stained in PBS supplemented with 1% fetal calf serum and 1mM EDTA. Samples were stained and then analyzed by flow cytometry using a Gallios and Kaluza software (Beckman Coulter), or by fluorescence-activated cell sorter (FACS). Antibodies used for flow cytometry and FACS analysis: CD4 (clone RM-4.5, catalog#: 100536, BioLegend), CD8 (clone 53–6.7, catalog#: 65–0081 and 75–008, Tonbo), F4/80 (clone BM8, catalog#: 123127, BioLegend), CD11b (clone M1/70, catalog#: 101224, BioLegend), MHCII (clone KH74, catalog#: 115303, BioLegend), CD45.2 (clone 104, catalog#: 109807, BioLegend), NK1.1 (clone PK136, catalog#: 12–5941-83, eBioscience), TCRβ (clone: H57–597, catalog#: 35–5961, Tonbo), CD44 (clone IM7, catalog#: 103127, BioLegend), CD62L (clone MEL-14, catalog#: 104417, BioLegend), B220 (Catalog#: 553090, BD Pharmingen).
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9

Murine T-cell Phenotyping Protocol

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Recombinant mouse IL-2 (not carrier-free) was obtained from R&D Systems. Antibodies were as follows: CD3ε (clone 17A2, eBioscience), CD4 (clone RM4-5, eBioscience), FoxP3 (clone FJK-16s, eBioscience), CD25 (clone 3C7, BioLegend), CD44 (clone IM7, BioLegend), CD45Rb (clone C363.16A, eBioscience), CD62L (clone MEL-14, BioLegend).
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10

Multiparameter Immune Cell Profiling

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Cells were isolated and treated as described for the respective experiment and analysis of cell surface antigen expression was performed. For intracellular staining, cells were fixed with 1% paraformaldehyde and permeabilized with 0.1% saponin. The following fluorescent-labeled antibodies were used: CD4 (clone RM4-5), CD8 (53-6.7), CD11b (clone M1/70), CD25 (clone PC-61), CD44 (IM7), CD45 (clone 30-F11), CD62L (clone MEL-14), CD69 (clone H1.2F3), CD155 (clone 3F1), CD172a (clone P84), CD200 (clone OX-90), CD273 (clone TY25), CD274 (clone MIH5), CD71 (clone RI7217), Gr1 (clone RB6-8C5), Ly6G (clone 1A8), Ter119 (clone TER-119) (all BioLegend or BD Bioscience, Franklin Lakes, NJ). Flow cytometry acquisition and analysis were performed on an Attune Flow Cytometer (Life Technologies, Foster City, CA).
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