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4 protocols using ab186407

1

Western Blotting of POLD1 and β-Actin

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Western blotting was performed according to the protocol of a previous study (Wang & Wang, 2012). Cells were lysed using RIPA buffer (Solarbio) with a protease inhibitor mixture (Solarbio), and the cell lysates were then centrifuged for 30 min at 12,000 g at 4°C. The supernatants were collected. After the protein concentration was determined by BCA protein assay kit (Invitrogen), total protein (30–50 μg) was loaded for separation by sodium dodecyl sulfate‐polyacrylamide gel electrophoresis (SDS‐PAGE) and then transferred to PVDF membranes (Millipore). Following blocking in 5% nonfat milk for 1 hr at room temperature, the membranes were incubated with a primary antibody for POLD1 (Abcam, ab186407) and β‐actin (Abcam, ab8226) overnight at 4°C. Then, the membranes were incubated with a HRP‐conjugated secondary antibody (ZSGB‐BIO) for 1 hr at room temperature after washing three times with TBST. Following washing, protein bands were visualized using a chemiluminescent substrate (Millipore) according to the manufacturer's instructions.
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2

Antibody Validation for Western Blotting

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Antibodies were used as following: Histone H3 (WB 1:5000) was a generous gift from Dr. Zhiguo Zhang; anti-DPD (ab6556, WB 1:2000), TS (ab58287, WB 1:2000) and Tubulin (ab186407, WB 1:5000) were purchased from Abcam; H3K27me3 (C36B11, WB 1:5000) and Ezh2 (D2C9, WB 1:2000) were purchased from Cell Signaling Technology; PU.1 (sc-352 X, WB 1:1000) was purchased from Santa Cruz. Primers used for real-time PCR are list in Table S1.
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3

Western Blot Analysis of DPD Protein

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Protein lysates were separated by SDS-PAGE and transferred to polyvinylidene difluoride (PVDF)-FL membrane (EMD Millipore, Saint Charles, MO). Membranes were blocked using Odyssey blocking buffer (LI-COR Biosciences, Lincoln, NE). Blots were probed with primary antibodies against DPD and α-tubulin (ab6556 and ab186407, respectively; Abcam, Cambridge, MA). IRDye800-conjugated goat anti-mouse and IRDye680-conjugated goat anti-rabbit secondary antibodies (LI-COR) were used for detection. Blots were scanned on a LI-COR Odyssey imager.
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4

Protein Extraction and Western Blot Analysis

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Proteins were extracted from patients' derived lymphoblastoid cell cultures in RIPA buffer (Thermofisher) supplemented with phosphatases and protease inhibitors (cell signaling), and Western blotting was performed using standard protocol. Equal amounts of total cell protein (15 μg per lane) were electrophoresed on SDS-polyacrylamide gradient gels (4-15% mini-protean TGX gel, Bio-Rad Laboratories) and transferred to nitrocellulose membranes (Amersham). The primary antibodies used were: monoclonal POLD1 (ab186407; Abcam) and GAPDH (#sc-365062, Santa Cruz). The primary antibodies were detected with horseradish-peroxidase-conjugated anti-rabbit (#7074, cell signaling) or anti-mouse IgG (#7076, cell signaling) secondary antibodies followed by measurement of chemiluminescence (Lumi-Light PLUS, Roche Applied Science).
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