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Fmoc protected phenylalanine

Manufactured by Merck Group
Sourced in Germany

Fmoc-protected phenylalanine is a chemical compound used in the synthesis of peptides and proteins. It consists of the amino acid phenylalanine with a Fmoc (fluorenylmethyloxycarbonyl) protecting group attached to the amino terminus. This compound is commonly used as a building block in solid-phase peptide synthesis and other applications requiring the controlled incorporation of phenylalanine residues.

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Lab products found in correlation

2 protocols using fmoc protected phenylalanine

1

Esterification of Iodinated Boron Dipyrromethene Compound

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Example 6

Prepared according to the general procedure for esterification reaction from 11 as shown below:

[Figure (not displayed)]

Compound 11 (49 mg, 0.08 mmol), phenylacetic acid (22 mg, 0.16 mmol), DCC (38 mg, 0.19 mmol) and DMAP (1 mg, 0.008 mmol) in dry dichloromethane (5 mL); reaction time: 4 h. Compound 6 was purified by flash chromatography (dichloromethane). Dark purple solid. Yield 36 mg (87%). Mp. 94-98° C. 1H NMR (400 MHz, CDCl3) δ (ppm): 7.38-7.07 (m, 5H, 5CH), 5.35 (s, 2H, CH2), 3.70 (s, 2H, CH2), 2.55 (s, 6H, 2CH3), 2.28 (s, 6H, 2CH3), 0.21 (s, 6H, 2CH3). 13C NMR (100 MHz, CDCl3) δ (ppm): 171.34 (C), 153.94 (C), 139.60 (C), 133.31 (C), 132.52 (C), 131.16 (C), 129.31 (CH), 128.91 (CH), 127.63 (CH), 87.72 (CH), 59.62 (CH2), 41.26 (CH2), 18.57 (CH3), 18.31 (CH3). HRMS-ESI [M−1] calcd for C24H26BI2N2O2 638.0218, found 638.0228.

Example 7

Compound 7, having the formula:

[Figure (not displayed)]
Can be synthesized using a procedure similar to the one described for compound 6, in Example 6, except that the phenylacetic acid is replaced with Fmoc-protected phenylalanine available from Sigma-Aldrich.

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2

Isotopically Labeled Peptide Synthesis

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13C9,15N1-labeled phenylalanine (Sigma-Aldrich GmbH, Taufkirchen, Germany) was Fmoc-protected using standard procedures [19 (link)]. Subsequently, the peptide synthesis of the Pep19-2.5 derivative containing four 13C9,15N1-labeled phenylalanine residues (analyte, Figure 3) was carried out by standard manual Fmoc/tBu solid-phase peptide synthesis on Fmoc-Rink amide resin (TentaGel R RAM, Rapp Polymere GmbH, Tübingen, Germany) [20 (link)]. The Fmoc-protected L-amino acids were purchased from ORPEGEN Peptide Chemicals GmbH (Heidelberg, Germany). For coupling of the isotope-labeled amino acid, 2 equivalents and a coupling time of 2.5 h was used.
The synthesis of deuterated Pep19-2.5 was carried out on an automated synthesizer (433A, Applied Biosystems, Waltham, MA, USA) on Fmoc-Rink amide resin. For the synthesis of the Pep19-25 derivative containing 32 deuterium atoms, eightfold deuterated Fmoc-protected phenylalanine (Sigma Aldrich, GmbH, Taufkirchen, Germany) was used and applied in excess of two equivalents. Pep19-2.5 labeled with 14C was obtained from Rainer Bartels (Leibniz-Zentrum für Medizin und Biowissenschaften, Borstel, Germany).
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