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Horseradish peroxidase conjugated goat anti rabbit secondary antibody

Manufactured by Bio-Rad
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Horseradish peroxidase-conjugated goat anti-rabbit secondary antibody is a laboratory reagent used in immunoassay techniques, such as Western blotting and ELISA, to detect the presence of rabbit primary antibodies. The secondary antibody is conjugated with the enzyme horseradish peroxidase, which can be used to catalyze a colorimetric or chemiluminescent reaction, allowing for the visualization and quantification of target proteins.

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25 protocols using horseradish peroxidase conjugated goat anti rabbit secondary antibody

1

Quantification of Antioxidant Enzymes in Plant Co-cultures

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Western blot analysis was performed for protein extracts from shoot seedlings of B. juncea, grown in a monoculture and in co-planting culture with M. sativa and Z. mays, in the presence and non-presence PGPR. RIPA buffer (150 mM NaCl, 1% Triton X-100, 0.5% Na deoxycholate, 0.1% SDS, 50 mM Tris, pH 8.0) was used to lyse the cells. The protein concentrations were determined using the Bradford method and 50 μg of each fraction was loaded on the gel. Proteins were separated on a 12% resolving SDS-PAGE gel. Immunodetection was carried out using primary polyclonal antibodies raised against CuZnSOD (chloroplastic Cu/Zn superoxide dismutase) or FeSOD (chloroplastic Fe superoxide dismutase) (Agrisera antibodies) at a dilution of 1:1000 and goat anti-rabbit horseradish peroxidase-conjugated secondary antibodies (BioRad) at a dilution of 1: 50000. CuZnSOD and FeSOD bands were visualized using the Amersham ECL system and quantified digitally using the Scan Pack 3.0 program. The results are presented as the mean ± S.E. obtained from 2 independent experiments (plant growths and preparations), and each determination was performed at least in triplicate throughout the study.
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2

Immunoblotting for 3-nitrotyrosine Proteins

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The presence of proteins containing 3-nitrotyrosine (NT) residues, an index of oxidative stress and protein nitration, was analyzed by immunodetection. First, 2.5 µg total protein from L. amazonensis was transferred to a nitrocellulose membrane using a vacuum system through a slot blot manifold (BioRad, Hercules, CA, USA). After blocking with 0.2% casein solution, the membrane was incubated for 12 h with rabbit polyclonal 3-nitrotyrosine antibodies (0.5 μg/mL; Upstate Biotechnologies, Waltham, MA, USA). After six washes with TBS-T (200 mM Tris, 1.37 M NaCl, 0.2% Tween-20), the membrane was incubated for 2 h with goat anti rabbit horseradish peroxidase-conjugated secondary antibodies (1:4000; BioRad). Immunoreactive bands were detected by chemiluminescence (Thermo Fischer Scientific) and their intensities were estimated by densitometric analysis (Chemi imager ® 5500 system, Alpha Innotech Corporation, Santa Clara, CA, USA). Results were normalized by the band intensity values obtained after staining with Ponceau red.
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3

Western Blot Analysis of iNOS in Microglia

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Primary microglia were lysed in a buffer containing 50 mM Tris–HCl, pH 7.2, 0.1% sodium deoxycholate, 1% Triton X-100, 5 mM EDTA, 5 mM EGTA, 150 mM NaCl, 40 mM NaF, 2.175 mM NaVO4, 0.1% SDS, 0.1% aprotinin and 1 mM PMSF. Ten micrograms of protein underwent SDS–PAGE following transfer on nitrocellulose membranes. Bands were detected using Pierce™ ECL Western Blotting Substrate (ThermoFisher Scientific, Waltham, MA, USA) on a Chemidoc digital imaging machine. We utilized an anti-iNOS rabbit primary antibody (1:200 in 1% BSA; Cayman Chemical, Ann Arbor, MI, USA) followed by a goat anti-rabbit horseradish peroxidase-conjugated secondary antibody (1:3,000; Bio-Rad, Hercules, CA, USA). Internal loading control was performed by anti-α-Tubulin mouse primary antibody (1:500 in 1% BSA; Sigma-Adrich, St. Louis, MO, USA) followed by a goat anti-mouse horseradish peroxidase-conjugated secondary antibody (1:1,000; Sigma-Aldrich, St. Louis, MO, USA; see Supplementary Figure S2 for antibody specificity). Densitometry quantification was performed with ImageJ Software (NIH) and expressed as ratio of iNOS to α-tubulin.
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4

Immunoprecipitation and Western Blot Analysis

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Western blot analysis was performed as previously described.22 (link) Nrf2, HO-1, BiP, PERK, IRE1, ATF6, CHOP, and p47phox were immunoprecipitated from 1 mg of each PBMC nuclear lysate or protein lysate with mouse monoclonal antibodies and anti-β-actin (Santa Cruz Biotechnology, Heidelberg, Germany). Immune complexes were captured with protein A/G–Sepharose beads (Pierce, Rockford, IL, USA) for 2 hours, and the beads were washed four times with 100 mM NaCl. Nrf2 (sc-722), HO-1 (sc-10789), BiP (sc-1050), PERK (sc-13073), IRE1 (sc-20790), ATF6 (sc-22799), CHOP (sc-7351), and p47phox (sc-14015) were detected by probing immunoprecipitates with rabbit poly-clonal antibodies (Santa Cruz Biotechnology), followed by goat antirabbit horseradish peroxidase-conjugated secondary antibody (Bio-Rad Laboratories Inc.). Reactive antigens were visualized with Supersignal chemiluminescence substrate (Pierce) and quantified by densitometric analysis with Chemi-Doc XRS (Bio-Rad Laboratories Inc.). Protein expression data were quantified with Quantity One Software (Bio-Rad Laboratories Inc.).
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5

Protein Separation and Immunoblotting Protocol

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Proteins were separated on 4–15% Mini-Protean TGX precast gels (BioRad). Molecular weight markers (PageRulerTM Prestained Protein Ladder) were from Thermo Scientific. Gels were stained with Bio-Safe Coomassie G-250 (BioRad, Solna, Sweden ) or, when used for immunoblots, transferred onto 2 µm PVDF membranes (BioRad). Membranes were blocked for 1 h in 5% non-fat powdered milk in PBS (137 mM NaCl, 2.7 mM KCl, 10 mM Na2HPO4, 1.8 mM KH2PO4, pH 7.4) followed by incubation for 1 h with primary antibody in 1% non-fat powdered milk in PBS. Membranes were then washed three times with PBST (PBS plus 0.1% Tween-20) followed by 1 h incubation with goat anti-rabbit horseradish peroxidase-conjugated secondary antibody (BioRad) in 3% non-fat powdered milk in PBS. The membrane was then washed twice with PBST followed by one wash in PBS before being developed using a Pierce ECL immunoblotting substrate (Thermo Scientific, Stockholm, Sweden) and imaged using a ChemiDoc MP system (BioRad).
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6

Pulmonary Pharmacokinetics of Growth Hormones

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SDS-PAGE and Western blotting techniques were used to assess pulmonary GH pharmacokinetics. Rabbit polyclonal antibodies specific to each of the GHs were produced by Cedarlane (Burlington, Canada) as previously described (37 (link)). Mice were treated intratracheally with a single dose of 500 μg of each GH and then euthanized, and their lungs were harvested at the indicated time points. Lungs were homogenized in a cocktail of protease inhibitors (Roche), and pulmonary GH concentrations were quantified by Western blotting with rabbit anti-GH antibodies. Goat-anti-rabbit horseradish peroxidase-conjugated secondary antibody (Bio-Rad) was detected with a chemiluminescent substrate (Thermo-Fisher). The half-life of each GH was determined by densitometric analysis using ImageJ software. Band intensity at each time point was normalized to the intensity at the zero-hour time point. Half-life was determined as 50% of the relative intensity of the bands compared to the zero-hour time point.
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7

Mitochondrial Dynamics Protein Profiling

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Fifty milligrams of heart samples were homogenized in ice-cold Tris buffer (50 mmol/l, pH 8.0) containing 50 mM sodium vanadate and protease inhibitor cocktail (Sigma-Aldrich Co., Budapest, Hungary) and harvested in 2× concentrated SDS-polyacrylamide gel electrophoresis sample buffer. Proteins were separated on a 12% SDS-polyacrylamide gel and transferred to nitrocellulose membranes. After blocking (2 h with 3% nonfat milk in Tris-buffered saline), membranes were probed overnight at 4°C with antibodies recognizing the following antigens: mitofusin-2 (Mfn-2; 80 kDa; 1:1000; Cell Signaling #9482), optic atrophy protein-1 (OPA-1; 100–110 kDa, 1:1000; Abcam ab42364), Drp-1(Cell Signaling, #8570S) and phospho-specific Drp-1 Ser616 (Cell Signaling, #3455S) (95 kDa; 1:1000). GAPDH was used as loading control (Sigma, #105M4803, 1:1000) Membranes were washed six times for 5 min in Tris-buffered saline (pH 7.5) containing 0.2% Tween (TBST) before addition of goat anti-rabbit horseradish peroxidase-conjugated secondary antibody (1:3000 dilution; Bio-Rad, Budapest, Hungary). Membranes were washed six times for 5 min in TBST and the antibody—antigen complexes were visualized by means of enhanced chemiluminescence. The results of Western blots were quantified using the NIH ImageJ program.
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8

Western Blot Analysis of Apoptosis Markers

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Total protein concentration was measured by bicinchoninic acid assay kit
(Sigma Aldrich, Shanghai, China). The same quality of protein (15 μg)
was fractionated on 4–15% polyacrylamide gels and transferred onto
nitrocellulose (Bio-Rad, Philadelphia, PA, USA). The levels of MTDH
were analyzed by western blot using an anti-MTDH at 1:700 dilution
(Thermo Fisher Scientific, Shanghai, China). Additionally, antibodies
detecting cleaved PARP and caspase-3 (1:1000; Cell Signaling, Beverly,
MA) were used to assess apoptosis activity. Membranes were washed
three times with TBST and incubated with the goat anti-rabbit
horseradish peroxidase-conjugated secondary antibody (1:2000; Bio-Rad,
Philadelphia, PA, USA). Normalization was performed by blotting the
same samples with an antibody against β-actin (Abcam, Burlingame, CA,
USA).
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9

Immunoassay Reagents and Protocols

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Reagents used were Carlo Erba Reagents S.A.S or Merck/Sigma chemicals co. Molecular standards and nitrocellulose strips were purchased to GE Healthcare, Uppsala, Sweden.
Lectins, streptavidin conjugate and ABC system for electrochemiluminescence were Vector Labs, Burlingame, CA, USA. Goat anti-rabbit horseradish-peroxidase conjugated secondary antibody used was bought to BioRad Laboratories, Inc. Alexa Fluor 488 Protein Labelling kit was Invitrogen, Life Technologies-Molecular Probes. U-shaped microtiter plates for hemagglutinating assays were Greiner Bio One, Germany.
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10

Comprehensive Western Blotting Protocol

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Western blot analysis was performed using the following antibodies: anti-Nog1 antibody (1:5000), anti-Nog2 antibody (1:20,000), anti-Arx1 antibody (1:2,000), anti-Nsa2 antibody (1:10,000), anti-Rlp24 antibody (1:2,000), provided by Micheline Fromont-Racine, anti-Nug1 antibody (1:10,000), anti-Bud20 antibody (1:5000), provided by Vikram Panse, anti-Ytm1 antibody (1:100), provided by John Woolford, anti-Has1 antibody (1:10,000) provided by Patrick Linder, anti-Ebp2 antibody (1:10,000), provided by Keiko Mizuta, anti-Noc3 antibody (1:1000), provided by Herbert Tschochner, anti-Rpl3 antibody (1:5,000), provided by Jonathan Warner, anti-Rsa4 antibody (1:10,000), provided by Miguel Remacha, anti-Arc1 antibody (1:5000, raised in the Hurt lab), horseradish-peroxidase-conjugated anti-Flag antibody (1:10,000; Sigma-Aldrich, Cat# A8592, RRID:AB_439702), horseradish-peroxidase-conjugated anti-HA antibody (1:5000; Roche, Cat# 12013819001; RRID:AB_390917), secondary horseradish-peroxidase-conjugated goat anti-rabbit antibody (1:2,000; Bio-Rad, Cat# 166-2408EDU, RRID:AB_11125345), and secondary horseradish-peroxidase-conjugated goat anti-mouse antibody (1:2,000; Bio-Rad, Cat# STAR105P, RRID:AB_323002).
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