The largest database of trusted experimental protocols

Sybr probe

Manufactured by Takara Bio
Sourced in Japan

The SYBR probe is a fluorescent dye used in real-time PCR (qPCR) assays. It binds to double-stranded DNA, enabling the detection and quantification of target DNA sequences.

Automatically generated - may contain errors

3 protocols using sybr probe

1

qRT-PCR Analysis of eIF4E1 Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
For qRT-PCR analysis, total RNA was extracted from 7-day-old seedlings using the RNeasy plant mini kit (Qiagen), and the first-strand cDNA was synthesized using the Takara PrimeScript First-strand cDNA synthesis kit (TAKARA). Next, PCR was performed on an Illumine Eco (Illumina) System with an SYBR probe (TAKARA). Expression levels of eIF4E1 were normalized to the expression level of two reference genes (ACTIN 2 and TUBULIN 2), respectively. The primers used are listed in Supplementary Table S1. Results obtained from three biological repeats with standard deviation (SD).
+ Open protocol
+ Expand
2

Quantitative Real-Time PCR Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was extracted by Trizol reagent (Merck, Darmstadt, Germany) and reverse transcribed to cDNA. Quantitative real-time PCR (q-RT PCR) was performed using SYBR probe (Takara Bio, Kusatsu, Japan), and fluorescence was detected with a CFX96 Connect Real-Time PCR Detection System (Biorad, Hercules, CA, USA). The primers used in the present study were purchased from Sangon Biotech (Shanghai, China), and the sequences were as below:
GAPDH forward primer: 5ʹ-GGTCACCAGGGCTGCTTTTA-3ʹ
GAPDH reverse primer: 5ʹ-GAGGGATCTCGCTCCTGGA-3ʹ
CEBPA1 forward primer: 5ʹ-GGTGGACAAGAACAGCAACG-3ʹ
CEBPA1 reverse primer: 5ʹ-GGTCAGCTCCAGCACCTTCT-3ʹ
GATA1 forward primer: 5ʹ-GCCTTCATCACTCCCTGTCC-3ʹ
GATA1 reverse primer: 5ʹ-AGGCGTTGCATAGGTAGTGG-3ʹ
SPI1 forward primer: 5ʹ-GTGCCCTATGACACGGATCTA-3ʹ
SPI1 reverse primer: 5ʹ-AGTCCCAGTAATGGTCGCTAT-3ʹ
+ Open protocol
+ Expand
3

Quantifying BMP/Smad Signaling in Neural Stem Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA were extracted from the serum-starved mNSCs and embryonic brain tissues (E 13.5, n = 3) using the RNeasy R Micro Kit (Qiagen, Germany). The quantity of RNA was analyzed with a Nanodrop 2000 spectrophotometer (Thermo Fisher Scientific, Waltham, MA, USA) and then reversely transcribed into cDNA system. qRT-PCR was performed using an SYBR probe (Takara Bio, Kusatsu, Japan), and fluorescence was detected with a CFX96 Connect Real-Time PCR Detection System (Biorad, Hercules, CA, USA). BMP2/4, Smad1/5/8 and Runx2 (runt-related transcription factor 2) were the key genes of the BMP/Smad signaling pathway. The primers were purchased from Sangon Biotech (Shanghai, China), and the sequences are listed in Table 1. The reaction was carried out in a 25 μL system. After the reaction, the relative expression of the target gene was calculated according to the average value of threshold cycle (Ct value) of the target gene and the housekeeping gene, which were expressed as 2−△△Ct.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!