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Mircury lnatm microrna target site blockers

Manufactured by Qiagen

The MiRCURY LNATM microRNA Target Site Blockers are laboratory equipment designed to block the interaction between microRNAs and their target sites. They provide a tool for investigating the functional role of specific microRNAs.

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2 protocols using mircury lnatm microrna target site blockers

1

Shear Stress Modulation of Endothelial Cells

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Primary MAoECs (passage 3; PELOBiotech GmbH, Planneg, Germany) and primary HAoECs (passages 2, 3; Promocell, Heidelberg, Germany) were cultured using endothelial cell complete growth medium (Promocell) containing gentamicin (0.05 mg ml−1; ThermoFisher).
To grow the cells under different shear stresses, MAoECs were cultured in collagen-coated perfusion chambers (µ-Slides VI0.4, ibidi GmbH, Martinsried, Germany) and exposed to high shear stress (10 dyne cm−2) or low shear stress (5 dyne cm−2) for 48 h generated by the perfusion with EC complete medium (ibidi Pump System, ibidi GmbH) containing 5-ethynyl-2’-deoxyuridine (EdU, 10 µM final conc., Click-iT® EdU Alexa Fluor® 488 Imaging Kit, Life Technologies) and TSBs (TSBs in vivo ready) or control LNAs (both 50 nM final conc., Exiqon).
MAoECs were transfected with antisense oligonucleotides to block the interaction between miR-103 and lncWDR59 (TSB; 50 nM, miRCURY LNATM microRNA Target Site Blockers; Exiqon) or scrambled controls. To inhibit lncWDR59 function, murine and human ECs were transfected with lncWDR59 GapmeRs (50 nM, LNATM GapmeRs; Exiqon) that strongly induce the degradation of the lncWDR59 transcript in the nucleus of the ECs.
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2

In vivo miRNA Target Site Blockers

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To selectively hamper the silencing activity of miR-155 and miR-200b/200c/429 on Cebpb and Zeb1 respectively in vivo, we used custom-designed target sites blockers with phosphorothioate backbone modifications from Exiqon (miRCURY LNA TM microRNA Target Site Blockers, in vivo ready). TSB sequences are designed with a large arm that covers the miRNA binding site and a short arm outside the miRNA seed to ensure target specificity. In detail, one sequence was generated to protect the unique miR-155-binding site in the Cebpb 3'UTR (TSB-155, Fig. S7). Five sequences were generated to protect the five different miR-200b/200c/429-binding sites in the Zeb1 3'UTR (Fig. S7) and mixed at equimolar ratios (TSB-200).
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