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19 protocols using pen strep solution

1

Cell Culture Protocols for HeLa, HCT-116, and HuH-7

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HeLa cells were purchased from ATCC (Cat # CCL‐2) and cultured at 37°C, 5% CO2 in DMEM, high glucose (Life Technologies, Cat # 41966), supplemented with 10% FBS (Life Technologies, Cat # 10270106), and 1% Pen/Strep solution (Sigma‐Aldrich, Cat # P4333). Same medium and conditions were employed for HCT‐116 cells (Clontech, Cat #630931) whereas HuH‐7 cells, received from the Health Science Research Resources bank of the Japan Health Sciences Foundation (Cat #JCRB0403), were grown in GlutaMAX (Life Technologies, Cat # 21885‐025), supplemented with 10% FBS (Life Technologies, Cat # 10270106) and 1% Pen/Strep solution (Sigma‐Aldrich, Cat #P4333).
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2

Midbrain Dopaminergic Neuron-Astrocyte Co-culture

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Cultures of midbrain dopaminergic neurons on top of cortical astrocytes were made from P1-P2 Wistar rats or DAT-IRES-Cre mice (Jackson Laboratory)36 (link). Briefly, tissue was dissected from the ventral midbrain and digested in a papain solution oxygenated with a carbogen (95% O2 + 5% CO2) at 37 °C for 30 min. The digested tissue was brought to a single cell suspension by trituration through pipette tips of increasingly smaller sizes and centrifuged at 500 g for 10 min. The neurons were resuspended in a prewarmed neuron medium (Neurobasal A (10888022, Gibco) with 1% GlutaMAX (35050061, Gibco), 2% B-27 plus (A3582801, Gibco), 200 µM ascorbic acid, 500 µM kynurenic acid, and 0.1% Pen-Strep solution (P0781, Sigma)).
The cells were plated in neuron medium in six-well plates on a monolayer of glia cells grown on poly-d-lysine coated coverslips (⌀ = 25 mm). Two hours after plating neurons, rat glial cell-derived neurotrophic factor (SRP3239, Sigma) was added for a final concentration of 10 ng/mL. The cultures were used for experiments 14–21 days after the neurons were plated out. The neurons obtained from DAT-IRES-Cre mice were transduced 5 days post dissection with pAAV-FLEX-tdTomato (Addgene).
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3

Adipocyte Differentiation from Adipose SVF

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Preadipocytes were isolated from iWAT and eWAT stroma vascular fraction (SVF) and differentiated in an adipogenic culture media after two passages to eliminate non‐preadipocyte cell contamination. In detail, WAT was aseptically minced and incubated with collagenase Type II (1 mg/mL, Sigma) at 37℃ for 45 min. After digestion, serum‐containing medium was added to the suspension and filtered through a 100 μm cell strainer. SVF cells were centrifuged for 10 min at 350 g and suspended in pre‐warmed adipogenic culture media, consisting of DMEM high glucose with Glutamax (Gibco) supplemented with 10% newborn calf serum (Thermo fisher), 2.4 nM human insulin (Sigma), and 1% antibiotic solution (Pen‐Strep solution, Sigma). To induce differentiation, SVF cells were seeded at near‐confluence and medium was replenished every day to allow selection by adhesion during the first 3 days and then changed every 2 days. SVF cells were cultured in an atmosphere of 5% CO2 and 20% O2 at 37℃. Based on preliminary experiments, day 7 was the time of differentiation used for all experiments.
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4

Antioxidant and Proliferation Assays

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Folin-ciocalteu reagent, anhydrous sodium carbonate (Na2CO3), Gallic acid, Ascorbic acid, Aluminum chloride (AlCl3), 2,2-diphenyl-1-picrylhydrazyl radical (DPPH), quercetin, potassium ferric cyanide (K3Fe(CN)6), iron (III) chloride (FeCl3), methanol, ethyl acetate, n-hexane, n-butanol, ethanol, trichloroacetic acid(TCA), thiobarbituric acid (TBA), HCl, NaOH, FeSO4, Tween 20, phosphate buffer, and BrdU Cell Proliferation ELISA assay reagent were provided by Roche, Berlin, Germany. Dulbecco’s modified eagle’s medium was purchased from DMEM, Sigma, Munich, Germany. Fetal bovine serum, PenStrep solution, and 5-fluorouracil were purchased from Sigma, Munich, Germany.
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5

Hamster Pancreatic Tumor Cell Line

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Hamster HapT1 pancreatic tumor cell line was kindly provided by Dr Hernandez-Alcoceba (Pamplona, Spain) and maintained in RPMI supplemented with 10% fetal bovine serum (FBS), 1% L-Glutamine, and 1% Pen/Strep solution (Sigma-Aldrich, St. Louis, MO, USA) at 37 °C and 5% CO2. Ad5/3-Luc1 [17 (link)], Ad5/3-E2F-d24-hTNFa, Ad5/3-E2F-d24-, Ad5/3-E2F-d24-hTNFa-IRES- (also known as TILT-123) have been previously described [18 (link)].
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6

Immortalized Human Periodontal Ligament Cells

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Human immortalized periodontal ligament cells (PDL-hTERT) were established as previously described [24 (link)]. PDL-hTERT cells were maintained at 5% CO2 and 37°C in Dulbecco's Modified Eagle Medium (DMEM, high glucose, +Glutamine, +Pyruvate) enriched with 10% fetal bone serum, 1% Pen-Strep solution and 2mM L-glutamine (all Sigma Aldrich, Munich, Germany). Medium change was performed twice a week.
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7

Infection of Macrophages by Leishmania mexicana

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Bone marrow-derived macrophages were differentiated for 7–9 days from the precursor cells of BALB/c mice in the presence of 20% L929 fibroblast cell culture supernatant as a source of macrophage-colony stimulating factor. Differentiated macrophages were cultivated in complete RPMI-1640 medium containing 10% FBS, 1 x PenStrep solution, 2 mM of L-glutamine (all from Sigma-Aldrich), and 50 μM of β-mercaptoethanol at 37°C with 5% CO2. To assess infection in macrophages, cells (5 x 104 per well) were plated on Lab-Tek chamber slides (ThermoFisher Scientific) and infected with WT or KO L. mexicana promastigotes freshly passaged through the mice, at a parasite to macrophage ratio of 5:1. Cells remained either unstimulated in complete RPMI 1640 medium or were stimulated 2 hours post infection (p.i.) with 50 U/ml of IFN-γ (Bio-Rad) and 500 ng/ml of LPS (Sigma-Aldrich). Slides were stained with Giemsa at 4 hours, 72 hours, and 6 days p.i. and the percent of infected macrophages and parasite load were counted from four biological replicates with two technical replicates each (400 cells per condition).
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8

Calcium-Dependent Signaling Assay

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CA and calcimycin and stock solutions were prepared in dimethyl sulfoxide (DMSO) and stored in the dark at −20 °C in a sealed glass vial until their use. The phosphate-buffered saline (PBS), RPMI-1640 medium, fetal bovine serum (FBS), pen-strep solution, doxycycline, N,N′-dimethylcasein, 5-(biotinamido)pentylamine, and N-acetyl cysteine (NAC) were purchased from Sigma Aldrich (Milan, Italy) while the TG2 inhibitor 1,3,dimethyl-2-[(2-oxopropyl) thio] imidazolium chloride (R283) was a kindly gift from Prof. Martin Griffin (Aston University, Aston Triangle, Birmingham, UK).
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9

Astrocyte-Dopaminergic Neuron Co-Culture

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The generation of cultures were approved by the Animal Experimentation Inspectorate, Denmark (Permission 2017–15–0201–01177). All efforts were made to minimize animal suffering and to reduce the number of animals used. Wistar rat pups (Charles River) at postnatal day 1 to 2 were used as described (36 (link)) for generation of cultures of a monolayer of cortical astrocytes with midbrain dopaminergic neurons atop. The cultures were plated on 25 mm poly-D-lysine coated coverslips in 6-well plates using a serum-free medium (Neurobasal A (Gibco) with 1% GlutaMAX (Gibco), 2% B-27 plus (Gibco), 200 μM ascorbic acid, 500 μM kynurenic acid and 0.1% Pen-Strep solution (Sigma-Aldrich) and half the medium was changed twice a week. The astrocytes were grown until 70 to 80% confluent following the addition of 6.7 μg/ml 5-fluoro-2′-deoxyuridine to inhibit further cell division. Rat glial cell-derived neurotrophic factor was included two hours after plating midbrain neurons for a final concentration of 10 ng/ml. The cultures were used for imaging after 14 to 21 days in vitro.
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10

Culturing Human Microvascular Endothelial Cells

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Human microvascular endothelial cells-1 (HuMEC-1) were kindly provided by Dr. V. Mirakaj (University Tübingen, Department of Anesthesiology and Intensive Care Medicine) and cultured in MCDB-131 (Life Technologies, Darmstadt, Germany) supplemented with 10% fetal calf serum (Gibco, Karlsruhe, Germany), 1% glutamine (Gibco, Karlsruhe, Germany), 1% pen/strep solution (Sigma Chemical Co. St. Louis, USA), 10 ng/ml Epidermal Growth Factor (Sigma Chemical Co. St. Louis, USA) and 1 μg/ml hydrocortisone (Sigma Chemical Co. St. Louis, USA) at 37 °C and 5% CO2 atmosphere.
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