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5 protocols using β globin

1

Western Blot Analysis of Hematopoietic Proteins

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Cells were lysed in 1X RIPA buffer (Thermo Scientific) supplemented with 1:100 protease inhibitor cocktail (Sigma Aldrich) on ice, and then centrifuged at maximum speed. Supernatants were mixed 1:1 with 2X Laemmli sample buffer (BioRad) under reducing conditions and boiled for 5 min. Following this, samples were separated via sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) for 1.5 hour at 110V, and transferred to nitrocellulose membranes for 1 hr at 90V. Membranes were blocked with 4% (wt/vol) milk 1% (wt/vol) BSA 1X Phosphate Buffer Saline 0.1% (vol/vol) Tween20 (PBS-T), and incubated with the following primary antibodies overnight at 4°C: BCL11-A (Abcam, MA), IKAROS (Santa Cruz Biotechnologies, CA), (Abcam, MA), and α-globin (Santa Cruz Biotechnologies, CA), β- globin (Santa Cruz Biotechnologies, CA), γ-globin (Santa Cruz Biotechnologies, CA), and GAPDH (Millipore, Germany). Membranes were washed 3 times with PBST and incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies for 1h at room temperature (RT). Bands were detected using enhanced chemiluminescence (ECL) (Thermo Scientific). All western blots presented in the manuscript are representative of multiple experiments, as detailed in the figure legend section. Quantifications were obtained with ImageJ software.
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2

Protein Quantification by Western Blot

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Proteins were resolved by SDS-PAGE and transferred to PVDF (Millipore). Membranes were blocked with 10% milk powder followed by incubation with primary antibodies against β-globin (Santa Cruz), Band 3 (IBGRL), MTAP, NF-E2 (both from Abcam) or β-actin (Sigma). Secondary antibodies were goat α-rabbit IgG-HRP and rat α-mouse IgG1-HRP (Abcam). Membranes were incubated with Immobilon Crescendo western HRP substrate (Merck), and bands were visualised by ImageQuant LAS 4000 (GE Life Sciences). For protein quantitation, the intensities of visualised bands were obtained from ImageJ 1.52.
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3

Quantification of Erythroid Markers

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Antibodies 3F4 and 8H4 specific for human and both human and mouse PrPC, respectively, were obtained from Signet Laboratories (Dedham, MA), and Abcam (cat #ab61409, Boston, MA). Antibodies specific to ferritin and β-actin were obtained from Sigma (cat# F5012, Sigma-Aldrich, St. Louis, MO) and Millipore (cat# MAB1501, Bedford, MA) respectively. Antibody to α-globin was from Abcam (cat# ab102758, Boston, MA), and for β-globin, neuroglobin, and glycophorin-A from Santa Cruz Biotechnology Inc. (cat# sc21757, sc30144, and sc19453, Dallas, Texas). Antibody specific for Tf was from GeneTex (cat# GTX21223, Irvine, CA) and for TfR from Millipore (cat# CBL47, Bedford, MA). Hemin (cat# 51280), protoporphyrin IX (cat# P8293) and FAC (cat# F5879) were purchased from Sigma (Sigma-Aldrich, St. Louis, MO). Cell culture supplies were from GIBCO (Life Technologies). All other chemicals were purchased from Sigma Aldrich (St. Louis, MO).
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4

Western Blot Analysis of K562 Cells

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The cultured K562 cells were harvested and lysed with protein extraction buffer. The concentration of protein was detected with a BCA kit (Beyotime, Shanghai, China), then equal amounts of cell extracts were separated on 12% SDS-PAGE gel and transferred into polyvinylidene fluoride (PVDF) membranes. Afterwards, the membranes were blocked with 5% nonfat milk and then incubated with primary antibodies against cyclin E1, CDK2, p27, CD42b, CD11b, CD14, GATA-1, Bcl-2, Bax, Cleaved Caspase-3, Caspase-3, DR4, GAPDH (Abcam, Cambridge, MA, USA), and β-globin (Santa Cruz Biotechnology, Santa Cruz, CA, USA) at 4°C overnight. Then, horseradish peroxidase-linked secondary antibodies (Santa Cruz Biotechnology, Santa Cruz, CA, USA) were added and incubated for 2 h at room temperature. The bands were visualized with ECL-PLUS/Kit (Beyotime, China) and quantified by Gel-Pro analysis software (Media Cybernrtics, Rockville, MD, USA). Three separate experiments were performed for each assay.
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5

Quantitative Fluorescent Western Blotting

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Western blot analysis was performed as described previously.26 (link) Briefly, fluorescent western blotting was performed on Immobilon-FL polyvinylidene difluoride membranes (Millipore), blocking was performed in Odyssey blocking buffer (LI-COR Biosciences), and antibody staining was performed in blocking buffer diluted 1:1 in Tris-buffered saline-0.1% Tween 20. Primary staining was performed overnight with gentle shaking at 4°C, and secondary staining was performed for 1 h at room temperature. Primary antibodies included γ-globin (1:1,000 dilution, Novus Biologicals, catalog number NB-110-41084) and β-globin (1:1,000 dilution, Santa Cruz Biotechnology, sc-21757), and secondary antibodies included IRDye 800 donkey anti-goat immunoglobulin G (IgG) (1:15,000 dilution, LI-COR Biosciences, catalog number 925-32214) and IRDye 680 donkey anti-mouse IgG (1:15,000 dilution, LI-COR Biosciences, catalog number 926-68072). Blots were visualized at 700 and 800 nm on the Odyssey imaging system (LI-COR Biosciences) and quantitated in Image Studio Lite (LI-COR Biosciences).
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