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57 protocols using ht7800 ht7700

1

Ultrastructural Analysis of Cells

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After treatment as predesigned, the MCs were immediately soaked in a commercial electron microscope fixing solution at room temperature for 2 h, and then soaked in 1% osmium acid for 2 h at dark-room temperature. After alcohol shaving and dehydration, the cells were permeated and embedded, and then ultrathin slices were made and stained with alcoholic uranyl acetate and alkaline lead citrate. After cleaning and drying, the slices were observed using the transmission electron microscope (TEM, HT7800/HT7700, Hitachi, Tokyo, Japan).
For scanning electron microscope (SEM) observation, the cells were postfixed with 1% of OsO4 at room temperature in the dark for 2 h. Then they were dehydrated through ethanol series and critical-point dried, mounted on stubs, and sputter-coated with a thin layer of conductive metal, gold, and palladium; finally, the images were observed under SEM (TEM, HT7800/HT7700, Hitachi, Tokyo, Japan).
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2

Quantitative analysis of C. albicans cell wall

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C. albicans suspensions were adjusted to an initial concentration of 5 × 104 cells/ml, and the suspensions were then transferred to new EP tubes, treated with different concentrations of EVs (0, 120 µg/ml), and cultured in KSFM (37°C, 5% CO2) for 12 h. Each cell suspension was collected by centrifugation (12000 rpm, 10 min), and the pellet was then suspended and incubated at 4°C in electron microscope fixative for 4h. The samples were washed three times with calcium carbonate buffer solution and treated with 1% agarose solution. The agarose blocks with samples were post fixed with 1% OsO4 in 0.1 M PB (pH 7.4) for 2 h at room temperature while protected from light. After the OsO4 was removed, the tissues were rinsed in 0.1 M PB (pH 7.4) 3 times for 15 min each. Then, the samples were dehydrated with an alcohol and acetone gradient. The cells were then embedded and polymerized. Thin slices (60−80 nm thick) were obtained by using a diamond cutter (Daitome, Ultra 45°) on a Leica superslicer (Leica, Leica UC7). The samples were stained with a uranium acetate-saturated alcohol solution (8 min) and lead citrate (8 min).The cells were then analyzed and photographed using TEM (Hitachi, HT7800/HT7700). The integrated optical density (IOD) and thickness of C. albicans cell wall were quantified and analyzed using Image-Pro Plus image analysis software Version 7.0.1 (Media Cybernetics Inc).
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3

Purification and Characterization of Leuk-1 Cell-Derived Extracellular Vesicles

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EVs derived from Leuk-1 cells (Leuk-1-EVs) were purified by sequential ultracentrifugation (17 (link)) (Figure 1A). Briefly, Leuk-1 cells were cultured in KSFM medium for 48 h and then centrifuged for 10 minutes at 500 × g to remove cell contamination, 20 minutes at 3,000 × g to remove apoptotic bodies and large cell debris, and 20 minutes at 12,000 × g to remove large microvesicles. After that, EVs were collected by ultracentrifugation in 31 mL ultracentrifugation tubes (#355618, Beckman Coulter, USA) at 110,000 × g for 70 min, washed in PBS, and pelleted again by ultracentrifugation at 110,000 × g in 70 Ti fixed-angle rotors in a Beckman Coulter Optima XPN/XE ultracentrifuge. Finally, the EVs were resuspended in 300 μl of PBS and stored at −80°C.
The ultrastructure and size of EVs were analyzed by transmission electron microscopy (TEM) (Hitachi, HT7800/HT7700, Japan) and subjected to nanoparticle tracking analysis (NTA) with a Zeta View® system (Particle Metrix, Germany). The protein concentration was measured by BCA assay (Enhanced BCA Protein Assay Kit, Beyotime Institute Biotechnology, China). Western blotting was performed to detect the protein markers of EVs, including CD63 (ab, 59479, Abcam, Cambridge, UK), TSG101 (ab 83, Abcam, Cambridge, UK), and HSP70 (10995-1-AP, Proteintech, Wuhan, China).
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4

Transmission Electron Microscopy of Cells

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HeLa cells were inoculated in 6-well plates transfected with the target plasmids for 36 h, or MARC-145 cells were infected with PRRSV strain HN07-1 for 12 h. The cells were collected and fixed using 2.5% glutaraldehyde fixative (Servicebio, Cat. No. G1102) at RT for 30 min. The fixed cells were dehydrated with a graded series of ethanol and finally embedded in pure LR White resin at 4°C (HaideBio, Cat. No. 14381-UC) using BEEM capsules (Electron Microscopy Sciences, Cat. No. 69920–00). After polymerization with a low-temperature UV polymerizer (UVCC2515; Electron Microscopy, Beijing, China), the resin blocks were sliced into 70- to 80-nm thin slices on an ultramicrotome (UC7; Leica, Wetzlar, Germany), and the ultrathin sections were then fished out onto the 150-mesh nickel grids with a Formvar film (Head Biotechnology Co., Cat. No. FCF200-Cu-50). Finally, the samples were observed at 80 kV using TEM (Ht7800/Ht7700; Hitachi, Tokyo, Japan). Representative images were shown.
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Ultrastructural Analysis of Asian Vine Snake Skin

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All specimens used for sequencing and experimentation were collected from Yunnan Province, China. All vouchers are stored in the Herpetological Museum of the Chengdu Institute of Biology, Chinese Academy of Sciences.
For the TEM experiments, two fresh skin samples (1cm×1cm) per color morph from the Asian vine snake were collected. The samples were then cut into small pieces (1 mm3) in fixative. The tissue blocks were transferred to an Eppendorf tube with fresh TEM fixative for further fixation, then washed using 0.1 M PB (pH 7.4) three times (15 min each). The samples were dehydrated in an increasing ethanol series at room temperature, followed by two changes of acetone and transfer to resin for embedding. The resin blocks were cut to 60–80-nm slices on an ultra-microtome (Leica, UC7), and the ultra-thin sections were put onto the 150-mesh cuprum grids. The cuprum grids were then stained with 2% uranium acetate-saturated alcohol solution and 2.6% lead citrate, respectively. Finally, the cuprum grids were observed under a TEM (Hitachi, HT7800/HT7700) and imaged.
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6

Visualizing PRRSV Infection in MARC-145 Cells

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The MARC-145 cells seeded in a 60-mm culture dish were transfected with siRNA duplexes (siNC or siTSG101). After 36 h, the transfected cells were infected with PRRSV at an MOI of 2 for 10 h. The cells were washed and centrifuged at 2,000 × g at 4°C for 2 min and then immobilized by using 2.5% glutaraldehyde fixative at room temperature for 30 min. The fixative was discarded, replaced with fresh fixative, and then transferred to 4°C overnight to continue the fixation. After three washes in double-distilled water, the fixed cells were dehydrated through a graded series of ethanol and finally embedded at 4°C in pure LR White resin (14381-UC; HaideBio, Beijing, China) using BEEM capsules (catalog no. 69920-00; Electron Microscopy Sciences, West Chester, PA). After polymerized with a low-temperature UV polymerizer (UVCC2515; Electron Microscopy China, Beijing, China), the resin blocks were cut into 70- to 80-nm thin slices on an ultramicrotome (UC7; Leica, Wetzlar, Germany), and the ultrathin sections were fished out onto the 150-mesh nickel grids with Formvar film. Finally, the sample grids were observed at 80 kV using TEM (Ht7800/Ht7700; Hitachi, Tokyo, Japan).
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7

Transmission Electron Microscopy Sample Preparation

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Twenty microliters of the sample was placed on the carbon-coated copper grids and left for 3–5 min. Thereafter, 2% phosphotungstic acid was added onto the carbon-supported copper grids for 1–2 min; excess liquid after each step was soaked up with filter paper. The grids were allowed to dry at room temperature before imaging under a transmission electron microscope (HITACHI, HT7800/HT7700; Supplementary Figure S1).
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8

Ultrastructural Analysis of Mitochondria

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Targeted fresh tissues were selected to minimize the mechanical damage, then cut with a sharp blade and harvested quickly within 1–3 min. The 1-mm3 tissue blocks were transferred into an EP tube with fresh TEM fixative for further fixation at 4 °C for preservation and transportation. The tissues were washed using 0.1 M PB (pH 7.4) three times for 15 min. Tissues were further fixed with 1% OsO4 in 0.1 M PB (pH 7.4) for 2 h at room temperature, followed by dehydration at room temperature. The resin blocks were cut into 60–80-nm sections on an ultra microtome, and the tissues were fished onto 150 mesh cuprum grids with a formvar film. Images were captured using a transmission electron microscope (HITACHI; HT7800/HT7700). Image J was used on transmission electron microscopic images to observe individual mitochondrial morphology, as described previously [27 (link)].
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9

Kidney Ultrastructure Examination by TEM

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Kidney samples to be used for electron microscopy were, post-fixed in 1% osmium tetroxide, dehydrated and embedded in Epon (1 h; 4°C) in the longitudinal orientation. After an initial low-power screening of semithin (300 nm) sections stained with toluidine blue to optimize the plane of sectioning, ultrathin (60 nm) longitudinal sections were cut for each sample. Briefly, the sections were mounted on copper grids, and stained with lead citrate and uranyl acetate (8 min; 37°C). For each biopsy, ≥10 longitudinal sections were examined by TEM (HT7800/HT7700; Hitachi Ltd.) at an accelerating voltage of 80 kV. A minimum of 10 micrographs were taken at ×2,500 magnification.
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10

Transmission Electron Microscopy Sample Preparation

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The collected cells were fixed in 2.5% glutaraldehyde fixative (Servicebio, China) for 30 minutes, followed by PBS cleaning and wrapping in 1% agarose. Then, fix at room temperature with 1% osmium acid in the dark for 2 hours, and sequentially add 30%, 50%, 70%, 80%, 95%, 100%, and 100% alcohol to dehydrate for 20 minutes each time, and 100% acetone twice, each time for 15 minutes. Then, after penetration embedding, remove the resin block and slice it into ultra-thin sections using an ultra-thin slicer (Leica UC7, Leica). The slices are then placed in a copper mesh box and dried overnight at room temperature. Finally, we observed and photographed under a transmission electron microscope (HT7800/HT7700, HITACHI).
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