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Polybrene tr1003g

Manufactured by Thermo Fisher Scientific

Polybrene (TR1003G) is a cationic polymer that enhances the efficiency of transfection, a process used to introduce foreign genetic material into cells. It functions by neutralizing the negative charge on cells, allowing them to more readily accept the genetic material being introduced.

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2 protocols using polybrene tr1003g

1

Engineered Fusion Protein for NR1 Studies

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We made a fusion gene that expresses the entire 561 amino acids of the N-terminal extracellular domain of human GluN1 (NR1) (UniProtKB - Q05586), including the amino terminal domain (ATD), followed by the Myc tag, a 6XHIS tag, a TEV protease cleavage site, and the transmembrane domain of the human platelet-derived growth factor receptor (PDGFR) (Additional file 1, Genbank Accession #) [13 (link), 15 (link)]. The gene was synthesized and inserted into the retroviral vector, pBabe puro by Genscript (Piscataway, NJ) [16 (link)]. Amphotropic retroviruses were produced in 293T cells following standard protocols, except that X-tremeGENE 9 DNA Transfection Reagent was used (354,087, Roche, Germany), and the cells were cultured in Advanced DMEM, 1% IFS, penicillin/streptomycin (Invitrogen, Carlsbad, CA) [17 (link)].
The retroviral supernatant was used to transduce 293T cells (2.5 X106 in a 10 cm dish), with 4 μg/ml polybrene (TR1003G, Thermo Fisher Scientific, Waltham, MA), for 6 h. 48 h later, cells were selected with 1 μg/ml puromycin (P9620, Sigma-Aldrich, St. Louis, MO). One week later, expressing cells were isolated by FACS staining with the murine anti-NR1 APC mAb (orb149996, Biorbyt, San Francisco, CA) on the BD FACSCanto II (Becton Dickson, Franklin Lakes, NJ). Four rounds of FACS over 4 weeks were performed to isolate a stable, homogeneous population of cells (293T-ATD).
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2

Comprehensive Antibody and Inhibitor Sources

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The antibodies to DCN (MAB1060), TGFBR1 (MAB2401), and AGER (MAB1179) were purchased from R&D Systems. The antibodies to EGFR (54359), KDR (9698), MET (82202), IGF1R (3027), TLR2 (13744), TLR4 (14358), and ACTB (3700) were purchased from Cell Signaling Technology (Danvers, MA, USA). The antibodies to MAP1LC3B (NB100-2220) and MCOLN1 (NB110-82375) were purchased from NOVUS (Centennial, CO, USA). The antibodies to DCN (PA5-13538) and LAMP1 (MA1-164) were purchased from Thermo Fisher Scientific (Pittsburgh, PA, USA). The antibody to TLR4 (117607) was purchased from BioLegend (San Diego, CA, USA). Rat IgG2A isotype control (MAB006) was purchased from R&D Systems (San Diego, CA, USA).
Erastin (S7242), RSL3 (S8155), liproxstatin-1 (S7699), ferrostatin-1 (S7243), Z-VAD-FMK (S7023), FIN56 (S8254), necrosulfonamide (S8251), sulfasalazine (S1576), cycloheximide (S7418), sorafenib (S7397), CCT137690 (S2744), oxaliplatin (S1224), BMS-345541 (S8044), and desferoxamine (S5685) were purchased from Selleck Chemicals (Houston, TX, USA). Cerulein (C9026) was purchased from Sigma-Aldrich (Houston, CA, USA). ML162 (20455), ML210 (23282), and staurosporine (25096) were purchased from Cayman Chemical (Ann Arbor, MI, USA). Puromycin (A1113802) and polybrene (TR1003 G) were purchased from Thermo Fisher Scientific.
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