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Nupage mini gel

Manufactured by Thermo Fisher Scientific
Sourced in United Kingdom

NuPage mini-gels are pre-cast polyacrylamide gels designed for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) separation of proteins. They are available in various percentage acrylamide concentrations and formats to accommodate different sample types and separation needs.

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18 protocols using nupage mini gel

1

Whole Cell Lysate Preparation and Western Blot

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For whole cell lysates, PBS washed cells were lysed in RIPA Buffer (10 mM Tris-Cl pH 8.0, 1 mM EDTA, 0.5 mM EGTA, 1% Triton X-100, 0.1% sodium deoxycholate, 0.1% SDS, 140 mM NaCl, 1x phosphatase (Phos-Stop, Roche) and protease (Complete, EDTA-free, Roche) inhibitor mixes) on ice for 20 min. Lysates were sonicated with a probe at medium intensity for 5 s in a Soniprep 150 instrument and clarified by centrifugation at 13000 g for 15 min at 4°C. Protein concentration was quantified using the DC Protein Assay (Bio-Rad) according to the manufacturer’s instructions. Proteins were denatured in 2X NuPAGE LDS sample buffer (Invitrogen) and 1% 2-metcaptoethanol (Sigma-Aldrich) for 5 min at 95°C. Proteins were separated by SDS-PAGE using NuPAGE mini gels (Invitrogen) and transferred onto 0.2 μm pore Nitrocellulose membrane (Amersham Protran; Sigma-Aldrich). Membranes were blocked with 5% skim milk/TBST (TBS/0.1%Tween-20) for 1 h at room temperature and probed with the indicated primary antibodies overnight at 4°C. Membranes were then washed 3 times for 10 min with TBST, incubated with appropriate secondary antibodies conjugated to a horseradish peroxidase (HRP) for 1 h at room temperature and washed again 3 times for 10 min with TBST. Immunoblots were developed using Clarity or Clarity Max Western ECL Substrate (Bio-Rad).
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2

SDS-PAGE Gel Staining Protocol

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All SDS-PAGE gels used were Invitrogen (Paisley, UK) 15 or 10 well 4-to-12% bis tris precast Nu-PAGE mini gels and were run according to the manufacturer's instructions. Invitrogen's Mark12™ unstained standard was used as a molecular weight marker at a 1 in 20 dilution. After running at 200 V for 35 min the gels were silver stained with the SilverSnap 2 stain kit from Pierce (Northumberland, UK). Reduction of samples was performed with DTT. Gels were photographed on a MEDALight light panel (Morco, UK).
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3

Western Blot Protein Analysis

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Proteins were separated by SDS-PAGE using NuPAGE mini gels (Invitrogen) and transferred onto a PVDF membrane (Millipore, Immobilon-P) using standard procedures. After transfer, the membrane was blocked in 5% skim milk/ TBST (TBS/ 0.1% Tween-20) for 30 min at room temperature and incubated with the indicated primary antibody (diluted in 5% skim milk/ TBST) for overnight at 4°C. The membrane was then washed 5 times for 5 min with TBST, incubated with a horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature, and washed again 5 times for 5 min with TBST. The immunoblot was developed using ECL Western Blotting Reagent (Sigma) or SuperSignal West Femto (Thermo Fisher Scientific). All incubations were carried out on a horizontal shaker.
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4

Immunoblotting of DNA-Binding Proteins

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Cells were rinsed twice with PBS, lysed in 2x NuPAGE LDS sample buffer (Invitrogen, 13778150) supplemented with 0.1M DTT and sonicated to release DNA-bound proteins. Protein concentration was measured using nanodrop, equal quantities were separated by SDS-PAGE using NuPAGE mini gels (Invitrogen) and transferred onto a nitrocellulose membrane using standard procedures. After transfer, the membrane was blocked in 5% skim milk/ PBST (PBS/ 0.05%Tween-20) for 1 h at room temperature and incubated with the indicated primary antibody (diluted in 5% skim milk/ PBST) overnight at 4°C. The membrane was then washed 5 times for 5 min with PBST, incubated with a horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature, and washed again 5 times for 5 min with PBST. The immunoblot was developed using ECL Western Blotting Reagent (Sigma). All incubations were carried out on a horizontal shaker. Primary antibodies used were mouse GFP (Roche, 1184460001, 1:1,000), rabbit RTEL1 (Novus, 1:3,000), mouse GAPDH (abcam, ab8245), mouse tubulin (Sigma, T6074)
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5

Western Blot Analysis of Key Metabolic Proteins

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ORS-KCs and HFs homogenized in RIPA buffer containing protease and phosphorylase inhibitors (Sigma-Aldrich, UK) were separated using NuPAGE minigels (Invitrogen, UK) according to the manufacturer’s instructions then transferred to a Trans-Blot Turbo PVDF membrane (Bio-Rad, UK) and incubated overnight at 4 °C with primary antibodies (β-Actin, G6Pase, G6PD, LDHA-Santa Cruz, UK; GYS1, Glut1, PCK1, PYGL-Proteintech, UK; GAPDH, LDHB, PGM1-Abcam) and thereafter with appropriate secondary horseradish peroxidase-conjugated antibodies (Dako, Denmark). Membranes were imaged using Clarity ECL chemiluminescence solution (Bio-Rad, UK) and visualized using ChemiDoc XRS (Bio-Rad, UK).
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6

Immunoblot Analysis of Mouse Aortic Tissue

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Immunoblot analysis was performed as described [20 (link)]. Mouse aortic tissues (20 μg protein per lane) were subjected to electrophoresis using pre cast 4–12% Nu Page mini-gels(Life Technologies).The resolved proteins were then transferred to PVDF membranes (EMD Millipore, Billerica, MA, USA). Subsequently, the membranes were blocked in 5% nonfat milk and probed with the respective primary antibodies. The immunoreactivity was detected using HRP-conjugated goat anti-rabbit secondary antibody (7074; Cell Signaling) followed by enhanced chemiluminescence (ECL; Thermo Scientific, Wilmington, DE, USA). The immunoblots for ECL detection of AMPK and its phosphorylated form were run in parallel. The protein bands were quantified by densitometric analysis using ImageJ.
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7

Western Blot Quantification of VSMC Proteins

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VSMC lysates (15 μg protein each) were electrophoresed using precast 4–12% NuPage minigels (Life Technologies), and the resolved proteins were transferred to PVDF membranes (EMD Millipore). The membranes were blocked with 5% milk in tris-buffered saline with tween (TBST) and probed with the indicated primary antibodies. After extensive washes, the immunoreactivity was detected using horseradish peroxidase-conjugated secondary antibodies followed by enhanced chemiluminescence. The protein bands were quantified using image J software, as described [37 (link)].
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8

Western Blot Analysis of VSMC Proteins

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VSMC lysates (15 µg protein each) were electrophoresed using precast 4–12% NuPage mini-gels (Life Technologies), and the resolved proteins were transferred to PVDF membranes (EMD Millipore). The membranes were blocked with 5% milk in tris-buffered saline with tween (TBST) and probed with the indicated primary antibodies. After extensive washes, the immunoreactivity was detected using specific horseradish peroxidase-conjugated secondary antibodies followed by enhanced chemiluminescence. The protein bands were quantified using image J software, as described [39 (link)].
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9

Western Blot Analysis of VSMC Proteins

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VSMC lysates (20 μg protein per lane) were subjected to electrophoresis using precast 4-12% NuPage mini-gels (Life Technologies). The resolved proteins were then transferred to PVDF membranes (EMD Millipore). Subsequently, the membranes were blocked in 5% nonfat milk and probed with the respective primary antibodies. The immunoreactivity was detected using HRP-conjugated horse anti-mouse secondary antibody (7076; Cell Signaling) or goat anti-rabbit secondary antibody (7074; Cell Signaling) followed by enhanced chemiluminescence (ECL; Thermo Scientific, Wilmington, DE). Immunoblots for ECL detection of a given protein target and its phosphorylated form were run in parallel. β-actin was used as an internal control. The displayed β-actin in the respective figures is representative of β-actin immunoreactivity for all blots. The protein bands shown in respective figures represent the results obtained from at least three separate independent experiments. The protein bands were quantified using Image J.
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10

Aortic Protein Expression Analysis

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Aortic tissue samples (20 μg protein each) were electrophoresed using pre-cast 4-12% NuPage mini-gels (Life Technologies, Carlsbad, CA), and the resolved proteins were transferred to nitrocellulose membranes (Hybond C, GE Healthcare Life Sciences, Piscataway, NJ) as described [28 ]. The membranes were blocked in 5% bovine serum albumin, and probed with the primary antibodies specific for phospho-AMPKα (Thr172), AMPKα, CaMKKβ, or β-actin. After extensive washes, the immunoreactivity was detected using specific HRP-conjugated secondary antibodies followed by enhanced chemiluminescence (GE Healthcare Life Sciences). The protein bands were quantified by densitometric analysis using Image J.
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