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488 goat anti rabbit

Manufactured by Thermo Fisher Scientific
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The 488 goat anti-rabbit is a fluorescently labeled secondary antibody used in immunoassays and other applications that require the detection of rabbit primary antibodies. The antibody is conjugated with the fluorescent dye Alexa Fluor 488, which emits green fluorescence when excited at the appropriate wavelength.

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9 protocols using 488 goat anti rabbit

1

Immobilized mCCL21 Visualization via Microscopy

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All in vitro haptotaxis assays were recorded with a 203/0.5 PH1 air objective on an inverted wide-field Nikon Eclipse microscope equipped with a light source with flexible excitation band selection (green 549/15, red 632/22; Lumencor). Confocal microscopy images were obtained with a 103/0.3 PH1 objective on a Leica SP5 upright laser-scanning confocal microscope equipped with 488, 561 and 633 nm laser lines and with a 203/0.8 air objective on an inverted Zeiss LSM 700 with 405, 488 and 640 nm laser lines. For mCCL21 24-98 bio quantification, images were obtained using a 203/0.8 air objective on a Zeiss Axio Observer microscope equipped with an external light source (Leica). B4F patterns were written using a 403/1.2 W Korr UV-Vis-IR water immersion objective on an inverted Zeiss Observer microscope equipped with 354-nm pulsed laser and a motorized piezo stage.
Antibody Staining for Immobilized mCCL21 24-98 bio Printed B4F patches were stained with SA-Cy3 for 20 min at room temperature in the dark. After washing with PBS, patches were incubated with PBS only or with mCCL21 24-98 bio in PBS (250 ng/mL). Subsequently, patches were stained with goat anti-mouse CCL21 (R&D Systems) and rabbit anti-goat 488 (Molecular Probes), goat anti-mouse CCL21 (R&D Systems) only, or rabbit anti-goat 488 (Molecular Probes) only. Patches were imaged using a Zeiss Axio Observer wide-field microscope.
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2

Quantification of Dopaminergic Neurons

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On in vitro day 5, cells were fixed with 4% of paraformaldehyde for 10 min at room temperature, washed three times with PBS, permeabilized with 0.1% triton (Sigma-Aldrich) in PBS for 5 min and were then blocked with 10% normal goat serum (Biozol) for 10 min at room temperature.
To visualize dopaminergic neurons, cells were incubated over night at 4 °C with the primary antibody anti-tyrosine hydroxylase (1:1000, Merck Millipore, Burlington, MA, USA). Washing of the cells three times with PBS was followed by incubation with the secondary antibody 488 goat anti-rabbit (1:500, Life Technologies) for 45 min at 37 °C. After two more washes the coverslips were then mounted in DAPI Fluoromount (Biozol) to stain the cell nuclei with DAPI and afterwards analyzed with a fluorescent microscope (Olympus BX51, Hamburg, Germany). In total, six randomized visual fields were analyzed with an x40 objective for each coverslip under blinded conditions and for the morphological analysis the cumulative lengths of the neurites were measured with the plugin NeuronJ of the software ImageJ. In each field the number of TH+ and DAPI positive cells were counted, to calculate a quotient of neurite length per cell and to compare the number of dopaminergic cells. The mean of the six fields was formed and compared.
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3

Cardiomyocyte Proliferation and Apoptosis Assay

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CMs (P1) were transfected with 25nM siFis1or siMff for 6 hours and then transfected with 50 nM of Mir-199 mimic for 48h. EdU was added in fresh medium after 56 hours and kept for the last 18 hours.
Cells were then fixed for 10 minutes in in 4% paraformaldehyde in PBS and permeabilized with 0.3% Triton X100 in PBS. After blocking (PBS containing 0.001% Triton X100, 1% BSA and 1% FCS), cells were incubated overnight at 4 °C with anti-TroponinI (1:500). The day after, cells were washed 3 times and incubated 1 h at RT in the dark with the secondary-conjugated antibody diluted 1:500 (488 goat anti-rabbit A11008 Life Technology). EdU has been labelled and detected using a Click-iT EdU Alexa Fluor 594
Imaging Kit (Invitrogen C10339). Nuclei were stained with DAPI (Invitrogen).
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4

Immunohistochemistry of Cellular Markers

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Immunohistochemistry was performed as previously described.33 (link) Primary antibodies used in this article are described in Supplementary Table S2. Alexa Fluor 488 goat anti-mouse, 488 goat anti-rabbit, 546 goat anti-rabbit, and 546 goat anti-mouse secondary antibodies (Molecular Probes, Invitrogen) were all used at 1:200 dilution. Nuclei were visualized by counterstaining with DAPI (1:10,000 dilution). Samples were mounted in 60% glycerol in PBS. Images were taken at 20× and 40× on an inverted fluorescent microscope (Eclipse Ti-U; Nikon Instruments). At least six sections were analyzed on each slide and for each antibody.
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5

Immunofluorescence Staining of Histone Marks

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Primary antibodies and their dilutions were as follows: 1:30,000 of 2.45 mg/mL mouse anti-H3K27me3 (Kimura mAb 1E7 clone CMA323, Wako cat#309-95259), 1:3000 original stock solution of rabbit anti-H3K27me3 (C36B11 Cell Signaling MAb#9733 lot#C36B11), 1:4000 of 0.4 mg/mL mouse anti-GFP (Roche cat#11 814 460 001 lot#14158300), 1:4000 rabbit anti-UNC-64 serum22 , 1:50,000 rabbit anti-PGL-1 serum23 , 1:500 guinea pig anti-HTP-3 serum24 (link). Secondary antibodies conjugated to Alexa Fluor: 488 goat anti-mouse (Life cat#A11001), 488 goat anti-rabbit (Molecular Probes cat#A-11008), 594 goat anti-rabbit (Life cat#A11012), and 594 goat anti-guinea pig (Molecular Probes cat#A11076) were used at 1:300 with 0.05 μg/mL 4′,6-diamidino-2-phenylindole (DAPI).
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6

Spatial Gene Expression Profiling in Zebrafish

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TgBAC (gata5: EGFP)pd25 embryos at the right developmental stages were fixed in 4% PFA at 4°C overnight. Prehybridization, hybridization, and the SSC washes were performed at 65°C (69 (link)). Detection of DIG-labeled probes was performed using an anti-DIG antibody, conjugated with horseradish peroxidase (HRP) (POD) (Roche, catalog no. 11207733910) 1:5000 followed by incubation with 1:50 to 1:100 TSA plus cyanine 3 solution (Akoya Biosciences, catalog no. NEL744001KT). To detect two genes at a time, embryos were incubated with a probe mix containing DIG- and Flu-labeled probes. Flu-labeled probes were detected using an anti–Flu-POD antibody (Roche, catalog no. 11426346910) and deposition of 1:50 to 1:100 TSA plus cyanine 3 solution. DIG-labeled probes were detected using an anti–DIG-AP antibody, developed with FastBlue (Sigma-Aldrich, F3378) and NAMP (naphtol-AS-MX-phosphate) (Sigma-Aldrich, N5000), and monitored under a dissecting scope. GFP was detected using primary antibody rabbit anti-GFP 1:500 (Torrey Pines Biolabs) and secondary antibody 488 goat anti-rabbit (Thermo Fisher Scientific, catalog no. A-11008) 1:1000. Embryos were stained for 4′,6-diamidino-2-phenylindole (DAPI) 1:2000 before mounting in low-melt agarose for imaging under a Nikon A1R Si point scanning confocal microscope at ×20 and ×40 magnification.
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7

Whole-Mount In Situ Hybridization in Zebrafish

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TgBAC (gata5: EGFP) pd25 embryos at the right developmental stages were fixed in 4% paraformaldehyde at 4 ℃ overnight. Prehybridization, hybridization and the saline-sodium citrate (SSC) washes were performed at 65°C 85 . Detection of Digoxygenin (DIG) labeled probes were performed using an anti-DIG antibody, conjugated with horse-radish peroxidase (POD) (Roche Cat#11207733910) 1: 5000 followed by incubation with 1:50 to 1: 100 TSA plus Cyanine 3 solution (Perkin Elmer). To detect two genes at a time, embryos were incubated with a probe mix containing DIG and Flu-labelled probes. Fluorescein labeled probes were detected using an anti-Flu-POD antibody (Roche Cat#11426346910) and deposition of 1:50 to 1: 100 TSA plus Cyanine 3 solution. DIG-labelled probes were detected using an anti-Dig-AP antibody, developed with FastBlue (Sigma, F3378) and NAMP (Sigma, N5000), and monitored under a dissecting scope. GFP was detected using primary antibody Rabbit anti-GFP 1:500 (Torrey Pines Biolabs) and secondary antibody 488 Goat anti Rabbit (Thermo Scientific, Cat# A-11008) 1:1000. Embryos were stained for DAPI 1:2000 before mounting in low melt agarose for imaging under a Nikon A1R Si Point Scanning Confocal at 20X and 40X magnification.
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8

Vascular Integrity of Brain Tumors

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Immunofluorescence staining for mouse albumin was performed to determine the vascular integrity of the brain. Brain sections obtained from GBM27 and GBM38 hCSCs and PBS control xenotransplants were incubated with a 5% blocking solution of the specific serum, and then incubated (overnight, 4°C) in solutions containing the following primary antibodies: goat anti-mouse CD105 (R&D Systems), goat anti-mouse albumin (Santa Cruz Biotechnology), and mouse anti-human vimentin (Santa Cruz Biotechnology). Then, Alexa Fluor-conjugated secondary antibodies were used for 1 h (donkey anti-goat 568, rabbit anti-goat 488, and goat anti-mouse 660; Life Technologies, USA), and then nuclei were counterstained with DAPI and coverslips were mounted using FluorSave™ reagent (Millipore). Fluorescence was examined under a Leica TCS SP5 inverted confocal microscope.
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9

Multiparametric Immunofluorescence Analysis

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Mouse anti-CNOT3 (H00004849-M01, Abnova), goat anti-OCT3/4 (SC-8628, Santa Cruz Biotechnology), mouse anti-OCT3/4 (SC-5279, Santa Cruz), rabbit anti-Cleaved Caspase-3 (ASP175, Cell Signaling Technology), goat anti-GATA6 (AF1700, R&D Systems), rat anti-PDGFRA (14-1401, eBioscience), goat anti-GATA4 (SC-1237, Santa Cruz), rabbit anti-NANOG (RCAB002P-F, Cosmo Bio), mouse anti-CDX2 (CDX-88, Biogenex) and mouse anti-Cyclin B1 (AS4135, Cell Signaling).
Donkey anti-goat-493 (Nl003, R&D), donkey anti-mouse-594 (A21203, Life Technologies), donkey anti-rabbit-647 (A31573, Life Technologies), goat anti-mouse-594 (A11005, Life Technologies), goat anti-mouse-488 (A11001, Life Technologies), goat anti-rabbit-488 (A11008, Life Technologies), goat anti-rabbit-594 (A11012, Life Technologies), goat anti-mouse-657 (A11078, Life Technologies), rabbit anti-goat-488 (A11078, Life Technologies), and goat anti-rat (A11006, Life Technologies).
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