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245 protocols using ab8805

1

Western Blot Analysis of AKT Proteins

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Total protein was extracted from cells using radioimmunoprecipitation assay buffer (Beyotime, China) and the protein was separated on 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis, as previously described [33 (link)]. The antibodies used were as follows: anti-AKT3 (Abcam, Cambridge, MA, USA; ab2157); anti-p-AKT (Abcam; ab8805); anti-P-AKT (Abcam; ab8805; ab192623); and anti-GAPDH (Abcam; ab9485). Original Western Blot images were provided in Supplementary file 1.
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2

Western blot analysis of IGF1R pathway

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After extracting total proteins with RIPA Lysis Buffer (Beyotime), the same amount of protein was separated by 10% SDS-PAGE gel and then transferred onto PVDF membranes (Invitrogen). The membrane was incubated with anti-IGF1R (1:1,000, ab263907, Abcam), anti-p-AKT (1:25,000, ab81283, Abcam), anti-AKT (1:500, ab8805, Abcam), anti-cyclin D1 (1:200, ab16663, Abcam), anti-GLUT1 (1:2,500, ab14683, Abcam), anti-YTHDC2 (1:1,000, ab220160, Abcam), or anti-β-actin (1:5,000, ab8226, Abcam) followed by hatching with Goat anti-Rabbit (1:50,000, ab205718, Abcam) or Goat-anti-Mouse (1:5,000, ab205719, Abcam). Protein signals were visualized with the BeyoECL Plus Kit (Beyotime).
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3

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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Samples were lysed with RIPA containing 1% protease and phosphate inhibitor cocktail (P8340; Sigma-Aldrich). Proteins were run on 10% SDS-PAGE and then transferred to PVDF membranes, which were incubated with primary antibodies at 4°C overnight and probed by secondary antibodies. Blots were visualized with enhanced chemiluminescence (WBKLS0500; Millipore, Temecula, CA) and the ChemiDoc Touch detection system (Bio-Rad). The following primary antibodies were used: slug (9585; Cell Signaling Technology, Danvers, MA; 1:1000), β-catenin (8480; Cell Signaling Technology; 1:1000), p-eIF2α (3398; Cell Signaling Technology; 1:1000), p-GSK3β (5558; Cell Signaling Technology; 1:1000), GAPDH (ab8245; Abcam, Cambridge, England; 1:1000), C/EBPβ (ab32358; Abcam; 1:1000), N-cadherin (ab76057; Abcam; 1:1000), MMP-2 (ab92536; Abcam; 1:1000), AKT (ab8805; Abcam; 1:1000), p-AKT (ab81283; Abcam; 1:1000), vimentin (ab92547; Abcam; 1:5000), and cleaved caspase-3 (19677-1-AP; Proteintech, Rosemont, IL; 1:500).
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4

Western Blot Analysis of Vascular Protein Markers

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Proteins from vascular tissue and cultured VSMCs were lysed by protein lysis buffer. Proteins were run on 8–10% SDS-PAGE to separation and then electro-transferred to PVDF membranes (Millipore). The membranes were blocked with 5% milk in TTBS for 2 h at room temperature and incubated overnight at 4 °C using the primary following antibodies: anti-IL-1β (1:1000, Proteintech, 16,806–1-AP), anti-IL-6 (1:1000, Proteintech, 21,865–1-AP), anti-TNF-α (1:1000, Proteintech, 6029–1-Ig), anti-PTEN (1:1000, Abcam, ab32199), anti-pan-AKT (1:1000, Abcam, ab8805), anti-pan-AKT (phospho T308; 1:1000, Abcam, ab38449), and 1:1000 anti-β-actin (1:2000, Santa, sc-47778). In the next day, after washing in the TTBS for three times, membranes were incubated with a 1:5000 dilution of anti-rabbit or anti-mouse antibody (Santa Cruz) for 1 h at room temperature. Protein bands were detected by enhanced chemiluminescence (ECL) Fuazon Fx (Vilber Lourmat).
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5

Western Blot Analysis of Protein Targets

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Total proteins from cells and tissues were extracted by the RIPA lysate. Protein quantification was conducted with a BCA protein quantification kit. An appropriate amount of protein sample was denatured at 100°C for 3–5 min and then subjected to protein electrophoresis using 10% SDS-PAGE for 1 h. the samples were transferred to PVDF membranes. The membranes were blocked in Tris Buffered Saline with Tween 20 blocking solution containing 5% skim milk powder at room temperature for 2 h. The membranes were washed three times with TBST and incubated overnight at 4°C using primary antibodies against MMP-2, MMP-9, p-PI3K, PI3K, p-AKT, AKT, and GAPDH (ab92536, ab76003, ab278545, ab140307, ab192623, ab8805, ab8245; all from Abcam, Shanghai, China). The next day, the horseradish peroxidase-labeled goat anti-rabbit secondary antibody IgG (ab96899) and goat anti-mouse secondary antibody IgG (ab96879) dilution buffer were added, and membranes were incubated with these secondary antibodies at room temperature for 2 h. The enhanced chemiluminescence reagent was added dropwise, and the membranes were imaged by the gel imaging system. The gray value of each band was analyzed by the ImageJ software. The results were expressed as the ratio of the gray value of the target protein to GAPDH, the internal reference protein.
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6

Protein Expression Analysis in CRC

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Total proteins were extracted from CRC tissue and cell samples by the RIPA reagent obtained from Sigma, USA, and separated using 10% SDS-PAGE. The isolated proteins were transferred into PVDF membranes followed by 5% nonfat milk incubation to minimize the noise. Next, the membranes were immersed in milk containing primary antibodies against SOCS3 (Rabbit, 1:2000, ab16030, Abcam, UK), CD133 (Rabbit, 1:1000, ab216323, Abcam), SOX2 (Mouse, 1:2000, ab171380, Abcam), OCT4 (Rabbit, 1:5000, ab109183, Abcam), AKT (Rabbit, 1:500, ab8805, Abcam), STAT3 (Mouse, 1:5000, ab119352, Abcam), p-AKT (Rabbit, 1:1000, ab38449, Abcam), p-STAT3 (Rabbit, 1:5000, ab76315, Abcam), and GAPDH (Rabbit, 1:3000, ab124905, Abcam), and incubated overnight. After excess primary antibodies were washed off by PBS, the membranes were probed by HRP-conjunct secondary antibodies, and the signals were visualized using the ECL reagent (Bio-Rad).
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7

Quantitative Western Blot Analysis

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Total proteins was extracted from tissues and then determined for protein concentration with a BCA kit (Boster Biological Technology Co.Ltd). Next, loading buffer was added into the proteins for 10 min of heating at 95 °C, followed by the sample loading of 50 μg per hole. Electrophoresis with 10% polyacrylamide gel (Boster Biological Technology co.ltd) was used to separate proteins, which were transferred to the PVDF membrane and blocked for 1 h with 5% BSA at room temperature. Next, primary antibodies (1:500 diluted) were added for overnight reaction at 4 °C, including RICTOR (ab70374, Abcam), p-Akt (s473) (ab8932, Abcam), Akt (ab8805, Abcam), and GAPDH (ab181602, Abcam). The membrane with proteins on it was washed for three times, 5 min each time, before the addition of secondary antibodies (1:1000 diluted, Abcam) for 1 h of incubation at room temperature. Subsequently, the membrane was washed again for three times/5 min before the development with ECL chemiluminescence reagent. With GAPDH as the internal reference gene, the gray value of target bands was analysed with the software Image J.
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8

Protein Expression Analysis of Rat Endometrium

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Rat endometrium tissues were initially homogenized and lysed in radio-immunoprecipitation assay (RIPA) buffer (Beijing Dingguo Changsheng Biotechnology Co. Ltd., China) supplemented with proteinase inhibitor (Lot#4693116001, Roche). Lysates were then centrifuged for 20 min at 12,000 g. The bicinchoninic acid (BCA) (Beijing Dingguo Changsheng Biotechnology Co. Ltd., China) was used for quantification of protein concentration. Equivalent amounts of protein (20 μg) were then used for western blot with primary antibodies of VEGF (ab53465, Abcam, UK), PI3K (ab191606, Abcam, UK), P-PI3K (ab182651, Abcam, UK), AKT (ab8805, Abcam, UK), P-AKT (ab38449, Abcam, UK), Ang-1 (ab102015, Abcam, UK), Ang-2 (ab155106, Abcam, UK) and HIF-1a (ab1, Abcam, UK) at 4 °C with gentle shaking overnight. After washing with TBS-T for three times, the membranes were then incubated with the secondary antibody at RT for 1 h and detected using an ECL plus kit (Beijing Dingguo Changsheng Biotechnology Co. Ltd., China). The ECL signals were detected with Quantity One software (Bio-Rad, Hercules, CA) and blot intensities were quantified by using imageJ (NIH, Bethesda, MD) software. Tubulin (ab8245, Abcam, UK) was used as an internal control to validate the amount of protein loaded onto the gels.
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9

Protein Expression Analysis in Cell Lysates

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Cells were lysed with radioimmunoprecipitation assay buffer (Beyotime Institute of Biotechnology, Haimen, China) and then concentration of the proteins were quantified by Enhanced BCA Protein Assay kit (Beyotime Institute of Biotechnology). Then SDS-PAGE was performed to separate the extracted proteins using 8% gel, and 30 µg protein loaded into each lane. Then, the proteins were transferred onto polyvinylidene fluoride membranes, which were then blocked with 5% non-fat milk at room temperature for 1 h and incubated with primary antibodies [anti-phosphoinositide 3-kinase (PI3K, ab151549; 1:1,000), anti-AKT (ab8805; 1:1,000), anti-phosphorylated (p)-AKT (ab38449; 1:1,000), anti-HMGA2 (ab97276; 1:500) and anti-GAPDH (ab9485; 1:2,000) all from Abcam, Cambridge, MA, USA] overnight at 4°C. On day 2, the membranes were washed and incubated with a HRP-conjugated secondary antibody (A0208; 1:5,000; Beyotime Institute of Biotechnology) at room temperature for 45 min, and then washed and incubated with BeyoECL Plus (Beyotime Institute of Biotechnology) at room temperature for 1 min. The bands were visualized using a ChemiDoc™ XRS+ imaging system (Bio-Rad Laboratories, Inc., Hercules, CA, USA). GAPDH was applied as the internal control. Densitometric analysis was performed with Image Lab software version 3.1.1 (Bio-Rad Laboratories, Inc.).
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10

Western Blotting Analysis of Hippocampal Proteins

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After the behavioral experiment, three mice were randomly selected from each group for Western blotting. The brain tissue of the mice was quickly removed and the hippocampus tissue was separated at low temperature. The treated brain tissue requires extraction of histones at low temperature, followed by grinding and centrifugation of the sample. The protein concentration of the sample is determined from the standard curve and then heated to denature the proteins of the sample. Electrophoresis and membrane transfer are then performed. We use the first antibody to react with the PVDF membrane overnight, put down the second antibody the next day and finally rinse with PBS solution. The gels were then scanned using an automated gel imaging system and analysed for calculation using ImageJ software. Main antibodies and dilution ratio: Anti-Akt (ab81283, Abcam, 1:1000); Anti-beta Amyoid 1-42 (ab201060, Abcam, 1:1000); Anti-IL-1beta (ab9722, Abcam, 1:800); Anti-IL-10 (ab9969, Abcam, 1:800); Anti-PI3K (ab191606, Abcam, 1:1000); Anti-GFAP (BA0056, BOSTER, 1:800); Anti-IBA-1 (PB0517, BOSTER, 1:800); Anti-Beclin1 (ab207612, Abcam, 1:1000); Anti-LC3 (ab192890, Abcam, 1:1000); Anti-p-Akt (ab8805, Abcam, 1:1000); Anti-β-actin (GB12001, Servicebio, 1:2000).
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