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Geneticin g418

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Geneticin (G418) is a broad-spectrum antibiotic used as a selectable marker in eukaryotic cell culture. It inhibits protein synthesis, allowing for the selection of cells that have been successfully transfected with a resistance gene.

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323 protocols using geneticin g418

1

SH-SY5Y Neuroblastoma Cells Expressing Human α-Synuclein

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SH-SY5Y neuroblastoma cells stably expressing human full-length α-syn (SH-SY5Y-α-syn), were provided by Dr Rohan de Silva, University College London (UCL), UK and were generated by transfection with a pCDNA3.1 vector (Life Technologies, UK) containing wild-type human SNCA cDNA under the control of a CMV promoter, as described [38 (link)]. Transfection was carried out with TransFast (Promega) followed by selection of clones in culture medium containing 0.3 mg/ml G418 (Geneticin, Life Technologies). Stable clones were further maintained in culture containing G418. SH-SY5Y-α-syn cells were routinely maintained in 42% vol/vol Ham’s F12 nutrient mixture (F12) (Sigma, UK), 42% vol/vol Eagle’s minimum essential medium (MEM) (Sigma, UK), 15% vol/vol foetal calf serum (FCS) (Sigma, UK), 2 mM l-glutamine (Sigma, UK), 1% vol/vol non-essential amino acids (NEAA) solution (Sigma, UK), 20 units/mL penicillin/20 mg/mL streptomycin (Sigma, UK) and 250 ng/mL amphotericin B (Life Technologies, UK) at 37°C in 5% CO2, 21% O2. SH-SY5Y-α-syn cells were maintained under constant selection pressure by use of 0.3 mg/ml G418 (Geneticin, Life Technologies).
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2

Transfection of E. histolytica Trophozoites

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HM1:IMSS strain E. histolytica trophozoites were transfected as previously described using the lipofection technique [32 (link)], but with the following changes: 30 μg plasmid DNA (>1 μg/μl solution, or a dried pellet) was suspended in supplemented M199 medium in 200 μl volume in 2 ml sterile microcentrifuge tubes, and 30 μl Attractene transfection reagent (Qiagen, Valencia, CA, USA) was added per tube. After overnight incubation at 37°C, 6 μg/ml G418 (geneticin) (Gibco/Life Technologies, Grand Island, NY, USA) was added for selection [33 (link)]. Transfectant stocks were maintained with 6 μg/ml G418 (geneticin) (Gibco/Life Technologies, Grand Island, NY, USA).
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3

Cell Culture Conditions for MDCK Cells

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MDCK-II cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Gibco) supplemented with 10% fetal bovine serum (FBS) (Biowest) and 1% penicillin/streptomycin (Gibco) at 37°C and 5% CO2. WT-GFP MDCK-II cells were maintained with 500 μ g/ml of G418 (Geneticin) (Gibco). MDCK cells were cultured in DMEM (Wako) supplemented with 10% FBS (Sigma-Aldrich), 1% penicillin/streptomycin (Life Technologies), and 1% GlutaMax (Life Technologies) at 37°C and 5% CO2. MDCK-GCaMP6s cells and MDCK-pTRE3G Myc-RasV12 cells were maintained with 80 μ g/ml of G418 (Geneticin) (Gibco) and 0.5 μ g/ml blasticidin (Invitrogen), respectively [55 , 56 ]. Mycoplasma contamination was regularly tested in all cell lines using a MycoAlert Mycoplasma Detection Kit (Lonza).
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4

Fission Yeast Stress Response Protocol

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Rich media consisted of YES media (Forsburg and Rhind 2006 (link)). Minimal media consisted of PMG media supplemented with all amino acids (Forsburg and Rhind 2006 (link)). When indicated, vitamin B1 (Sigma) was added to a final concentration of 10 µM to repress the promoter nmt1, 5-fluoroorotic acid (5-FOA; US Biologicals) to a final concentration of 1 mg/mL, and antibiotic Geneticin (G418; Gibco by Life Technologies) to a final concentration of 500 µg/mL.
All S. pombe strains were grown at 32°C. The exposure to stress was carried out by supplementing the media as indicated: PMG liquid media were supplemented with CoCl2 hexahydrate (Sigma) to a final concentration of 0.2 mM or 1.2 mM; PMG 2% agar Petri dishes were supplemented with CoCl2 to a final concentration of 0.2 mM or 8 mM; caffeine (Sigma) 10 mM; ZnCl2 (Sigma) 7.5 mM; or 50 mM potassium phthalate.
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5

Overexpression of Human SNAIL in B16F1 Melanoma Cells

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B16F1 melanoma cells were transfected with the plasmids containing human SNAIL. The pcDNA 3.1-human SNAIL construct was obtained from Prof. Muh-Hwa Yang (Taipei Veterans General Hospital, Taiwan). B16F1 melanoma cells were grown up to 85% confluence in 1 g/L glucose DMEM Biosera LTD (Courtaboeuf CEDEX, France) in presence of 0.1% penicillin/streptomycin and 10% FCS at 37 °C with 5% CO2. The Amaxa Nucleofector X Unit (Lonza, Basel, Switzerland) was used for the transfection of cells with 5 μg DNA/106 cells, according to the manufacturer’s instructions. Cells were cultured in medium with additional 200 μg/mL of Geneticin/G418 (Gibco/LifeTechnologies, Waltham, MA, USA). After two weeks of cell culture and refreshing selection media every two days, the colonies, which were well-separated, were selected. The culture of clones was scaled-up and SNAIL expression was verified by RT-PCR and Western blot analysis. Mock-B16F1 cells, transfected with an empty plasmid, cultured with media supplemented with G418 (200 μg/mL), were used as controls.
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6

Establishing Primary Thyrocyte Cultures

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Normal thyroid samples were obtained from patients undergoing surgery at IRCCS Istituto Nazionale dei Tumori (Milan, Italy). All patients gave their written informed consent, and the study was approved by the Independent Ethical Committee of Fondazione IRCCS Istituto Nazionale dei Tumori. Primary thyrocyte cultures were established and maintained in nutrient mixture Ham's F12 medium (custom made by Invitrogen, Carlsbad, CA, USA) containing 5% calf serum and bovine hypothalamus and pituitary extracts, as previously described [40 (link)].
4-hydroxytamoxifen (4OHT) (Sigma Aldrich, St Louis, Mo, USA) was used at 200 nM to activate RAS oncogene. Geneticin (G418, GIBCO, Carlsbad, CA, USA) and puromycin (Invitrogen, Carlsbad, CA, USA) were used for cell selection at 400 μg/ml and 2 μg/ml, respectively.
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7

Culturing and Infecting Leishmania Parasites

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LmSd (MHOM/SN/74/SD) and LmFn (MHOM/IL/80/Friedlin) were maintained as follows: promastigotes were grown at 26°C in medium 199 (M199) supplemented with 20% heat-inactivated FCS (Gemini Bio-Products), 100 U/ml penicillin, 100 µg/ml streptomycin, 2 mM l-glutamine, 40 mM Hepes, 0.1 mM adenine (in 50 mM Hepes), 5 mg/ml hemin (in 50% triethanolamine), and 1 mg/ml 6-biotin (M199/S). Parasites expressing an RFP (LmFn-RFP and LmSd-RFP) were grown using the identical culture medium supplemented with 50 µg/ml Geneticin (G418; GIBCO BRL). Infective-stage metacyclic promastigotes were isolated from stationary cultures (5–6 d) by density gradient centrifugation as described previously (Späth and Beverley, 2001 (link)). Mice were then inoculated with 1,000 or 200,000 metacyclic promastigotes in the ear dermis by intradermal injection in a volume of 10 µl. Lesion development was monitored weekly by measuring the diameter of the ear nodule with a direct-reading Vernier caliper (Thomas Scientific).
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8

Characterization of WNV IS-98-ST1 Strain

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Human epithelial cell HEK-293T (ATCC® CRL-3216™), simian epithelial cell Vero E6 (ATCC® CRL-1586™), human astrocytoma cell U-87MG (ATCC® HTB-14™), and human neuroblastoma cell SH-SY5Y (ATCC® CRL-2266™) were provided by CelluloNet (SFR-Biosciences, Lyon, France). HEK-293T, Vero E6, and U-87MG cells were grown in Dulbecco’s modified Eagle’s medium (DMEM; GlutaMAX, high glucose, Gibco™, Thermo Fisher Scientific, Carlsbad, CA, USA) supplemented with 10% heat-inactivated fetal bovine serum (FBS; Gibco™). SH-SY5Y cells were grown in DMEM/nutrient mixture F-12 (DMEM/F-12, Ham 1:1, GlutaMAX, Gibco™) supplemented with 2% heat-inactivated FBS. Cell cultures were maintained at 37 °C and 5% CO2. For the production of recombinant sNS1 protein, geneticin™-G418 (500 μg/mL, Gibco™) was added to the culture medium of HEK-293T cells 3 days before seeding them for transfection.
The IS-98-ST1 strain of WNV (provided by Dr. S. Lecollinet; ANSES-ENVA, Maisons-Alfort, France) is a highly virulent strain isolated from a stork with severe neurological symptoms during the 1998 epidemic in Israel [62 (link)]. Working stocks of WNV IS-98-ST1 were generated by a single round of amplification in Vero E6 cells. Titers of virus stocks were determined by a standard serial dilution plaque assay in Vero E6 cells, and results expressed as PFU/mL [1 (link),63 (link)].
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9

Lentiviral Expression of LMNA R321X

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Lentiviral construct coding for LMNA R321X mCherry-tagged protein was produced by Stratagene's Quik Change II XL site-directed mutagenesis kit (Agilent Technologies), using the the lentiviral plasmid encoding for mCherry-tagged Lamin WT mCherry-tagged (pLV[Exp]-Neo-CMV > mCherry(ns):hLMNA[NM_170707.4], Vector Builder). Mutagenic primers were designed using Quik Change Primer Design Program as previously shown [17 (link)]. The mutation was verified by sequencing.
Viral particles were produced in HEK-293T cells by simultaneously co-transfection (Invitrogen™ Lipofectamine™ 2000 Transfection Reagent) of the plasmid carrying the gene for protein of interest (mCherry-tagged-Lamin WT or mCherry-tagged-LMNA R321X), the envelope plasmid encoding VSV-G and the packaging plasmid encoding Gag/Pol and Rev, as previously reported [13 (link)].
For lentiviral transduction, HL-1 cells were plated in a 6-well plate at 30–50% of confluency, and after adhesion, they were incubated with 500 µL of virus-containing medium at 37 °C in a humidified 5% CO2 incubator for 18 h. After viral particles removal, cells were then incubated with 400 μg/mL Geneticin (G418, Gibco, Life Technologies) for 1 week to select stable clones. Pure clones were selected by fluorescence microscopy.
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10

Immortalized Human Astrocytes with IDH1 Mutants

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Cultures of immortalized primary human astrocytes81 (link) constitutively expressing wildtype IDH1 or mutant IDH1 (R132H), and corresponding parental cells were obtained from Dr. T.A. Chan (Cleveland Clinic) and prepared as previously described.13 (link) Stable expression of wildtype or mutant IDH1 was achieved via transduction with retroviral vector pLNCX2 and selection with G418 at 600 μg/mL (Gibco).13 (link) Parental cells were grown in Dulbecco’s Modified Eagle Medium (MT-10-090-CV, Gibco) supplemented with 10% fetal bovine serum (Sigma) and 5% Pen-strep (Corning); IDH wildtype and mutant cells were cultured with Geneticin (G418) at 600 μg/mL (Gibco) as the expression of mutant IDH1 presented as negative selection.
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