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Spectramax plus 384

Manufactured by Molecular Devices
Sourced in United States, United Kingdom, Germany, China, Japan

The SpectraMax Plus 384 is a high-performance microplate reader that provides precise and reliable absorbance, fluorescence, and luminescence measurements. It features a 384-well microplate format, enabling efficient and high-throughput assays. The instrument offers a wide range of wavelengths, making it suitable for a variety of applications in life science research and drug discovery.

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759 protocols using spectramax plus 384

1

Quantifying Tissue Lipid Content

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Oil-Red-O (ORO, O0625, Sigma-Aldrich, USA) was used to measure the amount of lipid droplets in a tissue, as we previously reported [11 (link)]. Samples were immersed in ORO (2 mM in 100% isopropanol, 10 µl/mg) and incubated at room temperature for 2 h. ORO-stained tissues were washed in 1% SDS overnight and lipids were extracted by soaking in 100% isopropanol for 4 h, then the extracted fluorescence was measured with a Micro plate reader (SpectraMax Plus384, Molecular Devices, Sunnyvale, CA, USA) at 500 nm.
DiI (468495, Sigma-Aldrich, USA) was used to measure the amount of phospholipids in a tissue. The tissue was immersed in 100% dimethyl sulfoxide (DMSO) for 24 h to allow homogenous loading of DiI deep into the tissue, after which it was again immersed in 0.2 mM DiI in DMSO overnight. Then, the tissue was washed with 1% SDS overnight, followed by the extraction of lipids by soaking in 100% isopropanol for 4 h. The extracted fluorescence was measured using a Micro plate reader (SpectraMax Plus384, Molecular Devices, Sunnyvale, CA, USA) at 550 nm.
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2

Cell Proliferation Assays for ASK120067 and Ibrutinib

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Cell proliferation was determined using the 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay or Cell Counting Kit-8 (CCK-8) assay (Vazyme Biotech). First, cells were seeded in 96-well plates (1.2 × 104 cells/well) for 2 h and exposed to various concentrations of ASK120067 or ibrutinib for 72 h.
We added 20 μl of MTT (5 mg/ml) to each well. Four-hours later, we added sodium dodecyl sulfate lysis buffer (100 μl). The absorbance of each well was recorded at 570 nm using a multi-well spectrophotometer (SPECTRAmax™ PLUS 384; Molecular Devices, Silicon Valley, CA, United States).
Each well was labeled with CCK-8 solution and the absorbance was measured using a multi-well spectrophotometer (SPECTRAmax PLUS 384) at 450 nm. The anti-proliferative activity of ASK120067 and ibrutinib was calculated as [1−(Absorbancetreated/Absorbancecontrol)] × 100%. Each experiment was repeated at least twice.
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3

Saliva Oxidative Stress Evaluation

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Saliva samples were collected at the final minute of the baseline, intervention and recovery periods and used for oxidative stress analysis. Initially, the total protein concentration was determined using a protein assay kit (Pierce BCA Protein Assay Kit -ThermoFisher), for this, 10 μL of saliva were mixed with 200 μL of standard BCA reagent diluted in phosphate-saline buffer (PBS) into 96 wellsplates and incubated for 30 minutes for later reading of the absorbance (562 nm, with SpectraMax Plus 384, Molecular Devices). Then, the samples were diluted until achieving 800 μM, concentration used in the oxidative stress test. The 2'7'-dichlorofluorescein diacetate probe (DCFH-DA, Sigma, EUA) was used for quantifying ROS in saliva samples.
Triplicates of saliva samples (50 μL) were added with the same volume of DCFH-DA 40 μM in 96 wells-plates and incubated for 20 minutes at 37℃, for later fluorescence analysis using excitation λ = 488 nm and emission = 525 nm (SpectraMax Plus 384, Molecular Devices). Values are expressed in units of fluorescence (UF).
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4

Cytotoxicity Evaluation of Xanthine and Uric Acid

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MDCK cells were seeded at a density of 1.47x103 cells/cm2 in 96-well plates. Cellular viability and cytotoxicity were evaluated at 48 and 96 hours after xanthine or uric acid treatments. MTT was given to cells at the final concentration of 0.5 mg/ml. After 4 hours of incubation at 37°C, cell medium was removed and the salt crystals formed inside the cells were solubilized with dimethyl sulfoxide (DMSO). Absorbance was then read at 570 nm using a spectrophotometer (Spectra Max Plus 384, Molecular Devices, Sunnyvale, CA, USA). Cellular cytotoxicity was evaluated by Lactate Dehydrogenase (LDH) assay (Bio Vision Inc., Milpitas, CA). MDCK cells were seeded as in MTT assay protocol and, at the end of the appropriate treatment, 100 μl of cellular supernatant were transferred to corresponding wells in an optical clear 96-well plate. 100 μl of reaction solution, consisting of catalyst solution and dye solution in a ratio 1:45, were then added to each well and incubated for 30 minutes at room temperature, protecting the plate from light. Absorbance was finally measured at 500 nm using a spectrophotometer (Spectra Max Plus 384, Molecular Devices). As positive control, Triton X-100 (1% final concentration) treated cells were considered, whereas free medium was used as negative control.
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5

Enzyme Inhibition Assay for MurC Ligase

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The enzyme inhibition assay was performed by using 6.2 nM E. coli MurC (UDP-N-acetylmuramic acid:L-alanine ligase) and 196 AM ATP, 75 AM UNAM, and 120 AM L-alanine. For IC50 determinations, Compound 4e was dissolved and serially diluted in dimethyl sulfoxide (DMSO) and 2 μl added to each reaction to span a concentration range from 200 to 0.4 μM. AMP-PCP was dissolved in water and added to each reaction to span a concentration range of 2 mM to 4 μM. Reactions were incubated for 20 min at room temperature and then quenched by addition of 150 μl Malachite green phosphate detection reagent [24 ]. After 5 min, microtiter plates were read for absorbance at 650 nm using a Spectramax 384 Plus reader (Molecular Devices). IC50 values were calculated by fitting to the two-parameter equation for inhibition in GraFit 4.0 [25 ].
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6

Absorbance Spectrum of Palythine

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The absorbance spectrum of palythine was measured between 280 and 400 nm using a Spectra Max 384 Plus (Molecular Devices, Sunnyvale, CA, U.S.A.) spectrophotometer.
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7

Lipoprotein Lipase Activity Assay Protocol

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LPL activity assays were performed as previously described [16 (link)]. Briefly, Intralipid (160 µg TG per well) served as the substrate in a reaction volume of 50 µl in phosphate-buffered saline (pH 7.4), containing 0.1% (w/v) fatty acid free bovine serum albumin, and the generation of FFAs after 1 h at room temperature was used as a measure of LPL activity [22 (link)]. A total of 0.2 units of LPL purified from bovine milk (Sigma-Aldrich, St. Louis, MO) was added as well. FFAs generated during the reaction were quantified in the same plate, using commercially available enzymatic reagents (Wako Chemicals, USA). Samples were read at A550 in a SpectraMax 384 Plus plate reader (Molecular Devices, Sunnyvale, CA).
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8

Kinetic Measurements of Organophosphate Hydrolysis

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All kinetic measurements were conducted using a Molecular Devices SpectraMax 384 Plus 96-well plate reader at 30 °C in 250 μL assay mixtures. Combination buffer was used for the experiments at pH 10 for compounds 1–11 and 13-21. Hydrolysis of compound 12 was followed in the same buffer at pH 9.0. Compounds with diethyl phosphorus centers (1-18) included a final concentration of 5% methanol as a cosolvent while the dibutyl series (19-27) used 5% DMSO. For the hydrolysis of 1.0 mM paraoxon by Sb-PTE, the inclusion of 5% methanol in the assay reduces the rate of hydrolysis by approximately 30%, while the inclusion of 5% DMSO reduces the rate of hydrolysis by approximately 10%. Hydrolysis of compound 22 was measured by monitoring the release of 1-butanethiol by the inclusion of 0.3 mM DTNB at pH 8.0 (ΔE412= 14 150 M−1 cm−1). Hydrolyses of compounds 23-27 were monitored using a pH-sensitive colorimetric assay.16 (link) The reactions were conducted in 2.5 mM BICINE buffer, pH 8.3, containing 0.2 M NaCl, 10% DMSO, and 0.1 mM of the pH indicator cresol purple to monitor proton release from the hydrolysis reaction. The effective extinction coefficient (ΔOD/M of H+) was found to be ΔE577 = 1.68 × 103 M−1 cm−1 by titration with acetic acid at pH 8.3, 30 °C.
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9

Cell Viability Assessment of Keratinocytes and Melanocytes

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Human keratinocyte cells and HEM cells (2 × 103 per well) were collected and seeded in triplicate 96-well plates in 100 μl of growth medium. Different seeding densities were optimized at the beginning of the experiments. 24 h after irradiation or SM treatment, Cell Count Kit-8 assay (Dojindo Laboratories, Kumamoto, Japan) was used to assess the cell viability of the HaCaT cells and HEM cells according to the manufacturer’s instructions. Next, the absorbance of each well was measured at an absorbance of 475 nm with the Spectra Max 384 PLUS microplate reader (Molecular Devices, Sunnyvale, CA, United States).
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10

Quantifying NETosis by ELISA

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To quantify NETosis, release of myeloperoxidase-DNA (MPO-DNA) complexes and elastase was measured by ELISA, as they are established markers for NETs.11 (link),12 (link) Briefly, following published protocols,13 (link) MPO-DNA complexes were measured by coating microtiter plates with mouse anti-human MPO antibody (BioRad, Hercules, CA) overnight at 4°C. After blocking with 1% BSA overnight at 4°C, samples were added at 1:50 along with the MPO-DNA immunoreagent provided in the Cell Death Detection Kit from Roche (Basel, Switzerland). After incubation for 2 hours, anti-DNA-POD detection antibody from the Cell Death Detection Kit was added, and the plate was incubated for 2 hours at room temperature. After addition of ABTS reagents, color development was measured at 405 nm using the Spectramax 384 PLUS (Molecular Devices, Sunnyvale, CA) and analyzed using SoftMax PRO software (Molecular Devices). Elastase was measured using a commercial human neutrophil ELISA kit (R&D Systems).
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