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29 protocols using apc anti mouse f4 80

1

Flow Cytometry Analysis of M1-like Macrophages

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To analyze M1-like macrophages, BMDMs were stained with PerCP/Cyanine5.5 anti-mouse/human CD11b (101228; BioLegend), APC anti-mouse F4/80 (123116; BioLegend), and Alexa Fluor 488® anti-mouse CD86 (105017; BioLegend). For intracellular iNOS staining, BMDMs after Fc-blocking were stained with PerCP/Cyanine5.5 anti-mouse/human CD11b (101228; BioLegend) and APC anti-mouse F4/80 (123116; BioLegend) at 4°C for 30 min, fixed and permeabilized with BD Cytofix/Cytoperm Kit (554714; BD Biosciences) at 4°C for 20 min. After washing with Perm/Wash buffer (BD Biosciences), the cells were stained with Alexa Fluor 488 anti-iNOS (53-5920-80; Invitrogen) at 4°C for 30 min. The stained cells were resuspended in 2% paraformaldehyde and analyzed using the NovoCyte 2060 R (ACEA Biosciences, USA), using FlowJo software ver 10.7.2 (BD Biosciences)
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2

Macrophage-mediated Phagocytosis of Tumor Cells

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We used mouse J774 cells, non-obese diabetic, severe combined immunodeficient, common gamma chain knockout mouse (NOD-SCID-Gamma, or NSG) macrophages, and human macrophages for our experiments. J774 macrophages were activated 24 hours before phagocytosis assays using 100 ng/ml recombinant mIFNγ (eBioscience). Cancer cells were either GFP+ or labelled with carboxyfluorescein succinimidyl ester (CFSE) (Thermo Fisher Scientific, Waltham, Massachusetts, USA) and were incubated with 10 μg/ml of CD47 blocking reagents, isotype controls, or tumour-targeting antibodies for 30 minutes. Macrophages were then co-cultured in non-adherent plates with cancer cells at a 1:1 (J774) or 1:2 (NSG, human macrophages) ratio. Phagocytosis was analysed by flow cytometry after 2 hours. Mouse macrophages were identified with PE/Cy7- or allophycocyanin (APC)-anti-mouse F4/80 (Biolegend), and human macrophages were identified with APC-anti-human CD206 (Biolegend). Phagocytosis was quantified as the percentage of F4/80+ or CD206+ cells that engulfed CFSE+/GFP+ tumour cells per total F4/80+ or CD206+ population. For soluble factor assays, Raji cells and J774 macrophages were suspended in supernatant harvested from cultured M14 melanoma cells titrated with new IMDM medium for the duration of the assay.
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3

Macrophage phenotype analysis by flow cytometry

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RAW264.7 cells were incubated in RPMI 1640 medium with 10 μg/ml SCAT-EXOs, 10 μg/ml PVAT-EXOs or equal amounts of PBS for 24 h, and then 50 ng/ml lipopolysaccharide (LPS, Sigma-Aldrich) was added for another 24 h. After being washed twice with cold PBS, the cells were harvested and incubated for 30 min at 4°C in the dark with antibodies including APC-anti-mouse F4/80 (Biolegend, CA, USA), PE-anti-mouse CD80 (Biolegend) and FITC-anti-mouse CD206 (Biolegend). The cells were analysed by flow cytometry (BD Pharmingen, NJ, USA) and FlowJo 7.5 (FlowJo, OR, USA).
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4

Comprehensive Tumor Immune Profiling

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Whole tumors were explanted, stored at 4°C for 24 h in MACS tissue storage solution (Miltenyi) and dissociated with Tumor dissociation Kit from Miltenyi biotechnology. After a first step of mechanical smashing with Gentle Macs Dissociation Kit, tumors were enzymatically digested for 30 min at 37°C as indicated in the protocol of dissociation kit. Flow cytometry analyses were performed using Symphony (BD Biosciences). Immune staining was performed using the following antibodies purchased by BD Biosciences: PE-Cy7 Rat anti-mouse CD45 (30-F11), BB700 anti-mouse CD3e (145-2C11), BV786 Rat anti-mouse CD4 (RM4-5), APC anti-mouse CD8a (53-6.7), BB515 Rat anti-human/mouse CD11b (M1/70), APCR-700 Rat anti-mouse CD25 (PC61), BV421 Hamster anti-mouse γδ T-Cell Receptor(GL3), PE-CF594 anti mouse FOXP3 (MF23), BV480 hamster anti-mouse CD49b (HMα2), BV605 Rat anti-mouse CD19 (1D3), APC-H7 LIVE/DEAD Fixable Viability Stain 780. APC anti-mouse F4/80 was purchased by Biolegend. BD Pharmingen Purified Rat Anti-Mouse CD16/CD32 (Mouse BD Fc Block), BD Pharmingen Transcription Factor Buffer Set, BD Horizon Brilliant Stain Buffer were used during the staining procedure as indicated in the protocols. Analyses were performed using FlowJo software.
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5

Cell Death Assay Protocol for Various Cell Lines

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For cell death assay, RAW264.7s, THP-1s, LLCs, A549s was seeded into 6-well plates and treated with PP VII or different CMs for 24 h followed by harvested for staining. Apoptosis Detection Kit (556547, BD Biosciences) was performed as manufacturer’s recommendation. Cells were incubated with FITC-Annexin V in a buffer containing propidium iodide (PI) then processed by FACSVerse (BD Biosciences). For RAW264.7s staining, single-cell suspensions were prepared and stained according to standard protocol with Brilliant Violet 421 anti-mouse CD86 (105031, Biolegend) and APC anti-mouse F4/80 (123116, Biolegend). The data were acquired on a Fortessa Platform (BD Biosciences) and analyzed with FlowJo software (Version V10.0.7, Tree Star).
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6

Hepatic Macrophage Immunophenotyping by FACS

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THP-1 cells and hepatic macrophages in each group were harvested and stained with APC/CY7 anti-mouse CD45 (103116; BioLegend, USA), PE anti-mouse CD11b (101208; BioLegend), APC anti-mouse F480 (123116; BioLegend), PC7 anti-mouse CD206 (141720; BioLegend), PC7 anti-human CD206 (T7-782-T100, EXBIO) and PC5.5 anti-mouse MHC-II (107626; BioLegend) antibodies at 4 °C for 30 min. Hepatic macrophages were detected in the mice by grinding the liver tissues gently, filtering the homogenate through a 80-μm nylon mesh filter, and isolating hepatic mononuclear cells with 40% and 80% Percoll (17-0891-01; GE Healthcare, UK). The isolated cells were stained with the above surface markers after being blocked with anti-mouse CD16/32 (TruStain FcX PLUS; BioLegend) following red blood cell lysis (420301; BioLegend, USA). After staining, the cells were washed three times with PBS and resuspended with 200 μl of 10% BSA diluted with PBS, and analyzed by FACS with a BD FACS Aria II (BD Science, USA). The data were analyzed using FlowJo v10 (TreeStar, Ashland, USA).
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7

Tumor-Infiltrating Immune Cell Profiling

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Tumors were digested to single cell suspension with Type IV collagenase (Sigma-Aldrich). Mouse Tumor-infiltrating lymphocyte Isolation Kit (Solarbio) was used to remove cancer cells and enrich leukocytes. Peridinin-chlorophyll-protein anti-mouse CD45 antibody (Biolegend) was used to mark the leukocytes. APC anti-mouse F4/80 (Biolegend) and fluorescein isothiocyanate anti-mouse/human CD11b (Biolegend) antibodies were used to mark macrophages. Phycoerythrin anti-mouse CD274 antibody (Biolegend) was used to detect the expression of PD-L1. Stained cells were analyzed by BD FACSCelesta (BD Biosciences). Data were processed by FlowJo.
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8

Fc Receptor Blocking Antibody Purification

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The CRL-2024 anti-IFN-γ receptor, F3 anti-IFN-γ, 34-3C anti-red blood cells (RBCs), IgG2a mAbs, and 2.4G2 anti-FcγR IIb/III IgG2b mAb (gamma block) were purified on protein G sepharose beads from hybridoma cultures. PE anti-mouse CD64 mAb (FcγR I), PE isotype control, PE anti-mouse F4/80, APC anti-mouse F4/80, PerCP anti-mouse CD11b mAbs, and Alexa 647 anti-mouse FcγR IV mAbs were purchased from Biolegend (San Diego, CA, USA). PE anti-mouse CD16 (FcγR III) was purchased from R&D Systems (Minneapolis, MN, USA). Normal hamster IgG (eBioscience, San Diego, CA, USA) was used as a control isotype. Cobra Venom Factor (CVF; Quidel Corporation, San Diego, CA, USA) was used at a rate of 4 U/mouse.
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9

Comprehensive Antibody Panel for Cellular Signaling

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The following antibodies were used: anti-B7-H3 (Proteintech #66 481–1-Ig); antiphospho-p38 MAPK (Thr180/Tyr182) (CST #4511); anti-p38 (CST #9212); antiphospho-eIF4E (S209) (HUABIO #ET1608-66); anti-eIF4E (Proteintech #66 655–1-Ig); anti-HER2 (Proteintech #18 299–1-AP); anti-α-tubulin (Beyotime Biotechnology #AF5012); anti-β-actin (Proteintech #6009–1-Ig); anti-PDL1 (CSB-MA878942A1 m); anti-EGFR (ZENBIO# 201012); HRP conjugated goat antirabbit IgG goat polyclonal antibody (HUABIO #HA1001); and HRP-conjugated goat antimouse IgG goat polyclonal antibody. Antibodies for flow cytometry, including PerCP-Cy5.5-antimouse CD45, FITC-antimouse CD11B, APC-antimouse B7-H3, APC-Cy7-antimouse CD3, FITC-antimouse CD4, BV510-antimouse CD8, APC-antimouse F4-80, BV421-antimouse CD86, PE-antimouse CD206, and PE-antihuman B7-H3, were all purchased from Biolegend.
Cells were treated with the following reagents: SB203580 (Beyotime Biotechnology# S1863); recombinant human TNF-alpha protein (Sinobiological# 10602-HNAE); and lipopolysaccharide (LPS) (Biosharp#BS904).
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10

Antibody Panel for Immunofluorescence and Flow Cytometry

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Antibodies for immunofluorescence were purchased from the following sources: F4/80 (0.2 μg/ml, BM8, OriGene, Rockville, MD, USA), TNF-α (2.5 μg/ml, MP6-XT3, eBioscience, San Diego, CA, USA), IL-10 (2.5 μg/ml, JES5-2A5, eBioscience), fibronectin (0.7 μg/ml, Polyclonal, invitrogen, Carlsbad, CA, USA), and collagen IV (2.5 μg/ml, Polyclonal, Invitrogen). Secondary antibody were goat anti-rat IgG Alexa Fluor® 488 (2 μg/ml, BioLegend, San Diego, CA, USA), streptavidin Alexa Fluor® 594 (0.5 μg/ml, BioLegend), goat anti-rabbit IgG Alexa Fluor® 488 (2 μg/ml, Invitrogen).
The following antibodies (BioLegend) were used for flow cytometry: APC anti-mouse F4/80 (2.5 μg/ml, BM8), PE/Cy7 anti-mouse CD86 (1.25 μg/ml, GL-1), PE anti-mouse CD206 (1.25 μg/ml, C068C2), PE/Cy7 anti-mouse TNF-α (5 μg/ml, MP6-XT2), and Alexa Fluor® 488 anti-mouse IL-10 (12.5 μg/ml, JES5-16E3).
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