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6 protocols using anti rorγt pe

1

Multiparametric Flow Cytometry Analysis

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Cells were labelled with flow antibodies for 15 minutes in the dark in PBS containing 2% BSA. Labelled cells were washed twice and resuspended in PBS containing 2% BSA. The prepared samples were analyzed using an LSR-II flow cytometer (BD Bioscience) or sorted using an Aria II cell sorter (BD Bioscience). Anti-CD19-PeCy7 (561739), anti-CD3-PeCy7 (552774), anti-NK1.1-BV421 (562921), anti-NKp46-FITC (560756), anti-NKp46-AF647 (560755), anti-CD49b-PE (553858), anti-CD49a-PerCP-Cy5.5 (564862), anti-CD62L-APC (553152), anti-T-bet-APC (561264), anti-CD45.2-AF700 (560693), anti-CD45.2-FITC (553772), anti-Gata3-AF647 (560068), anti-RORγt-PE (562607), anti-CD127-V450 (561205), anti-CD117-PE (553869), anti-LPAM-1-APC (562376), anti-Flt3-BV421 (566292), anti-Ly-6A/E-APC (565355), and anti-CD122-PE (553362) were purchased from BD Bioscience. Anti-IFN-γ-AF-700 (505823) and anti-CD25-Pacific Blue (102022) were purchased from Biolegend. Anti-CD253-APC (17-5951-82), anti-Eomes-PE (12-4875-82), and anti-CD127-PerCP-Cy5.5 (45-1271-80) were purchased from eBioscience.
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2

Multiparameter Flow Cytometry Analysis

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Cell surface and intracellular phenotypes were determined by flow cytometry using the following reagents: anti‐CD4‐Alexa 488 (0.2 μg/mL, RM4‐5); anti‐ROR‐γT‐PE (2 μg/mL, Q31‐378); anti‐IL‐4‐PE ((2 μg/mL, BVD4‐1D11) BD Biosciences, UK); anti‐CD25‐eFluro450 (0.2 μg/mL, eBio3C7); anti‐IL‐17‐APC (0.2 μg/mL, eBio17B7), anti‐CD69‐PE (0.2 μg/mL, H1.2F3), and anti‐IFN‐γ‐PEcy7 ((0.2 μg/mL, XMG1.2) eBioscience, UK). For intracellular cytokine staining, cells were blocked with 200 μg/mL of rat serum (Sigma, UK) and fixed and permeabilized using Foxp3 staining kit (eBioscience) according to manufacturer's instructions. Data were acquired using FACS Canto‐II (BD) and analyzed by Flowjo software 8.7.1 (Treestar, USA). The following gating strategy was used (see also Supporting Information Fig. 1: (i) a ‘life’ gate was set on the FSC/SSC plot; (ii) a gate was set on CD4+ cells, based on an isotype‐matched control plot; (iii) marker of interest‐positive cells were gated on the basis of a fluorescence‐minus‐one plot – unstained and isotype‐matched control samples were used to exclude nonspecific binding of mAbs used.
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3

Multiparameter Flow Cytometry of Murine Immune Cells

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The murine spleen cells and lymph nodes cells were stimulated using PMA, ionomycin and protein transport inhibitor (BD GolgiStop) for 4 h. At the end of stimulation, the cells were permeabilized using IC fixation buffer and 1× permeabilization buffer (eBioscience, San Diego, CA, USA). The following antibodies were used for flow cytometry: anti‐IFN‐γ‐APC (177311, eBioscience, San Diego, CA, USA), anti‐IL‐17A‐PE (130103015, Miltenyi, Auburn, CA, USA), anti‐Tbet‐APC (644813, Biolegend, San Diego, CA, USA), anti‐Foxp3‐FITC (eBio7979; 115773, eBioscience, San Diego, CA, USA), anti‐RORγt‐PE (562607, BD Pharmingen, San Diego, CA, USA), anti‐CTLA4‐PE (121522, eBioscience, San Diego, CA, USA) and anti‐CD4‐VioBlue (130102456, Miltenyi, Auburn, CA, USA). Single‐cell suspensions were examined on a FACS Fortessa (BD Immunocytometry Systems, San Jose, CA, USA), and the data were analysed using FlowJo software. The numbers in the corners of the FACS dot plots represent the percentage of each cell population within that quadrant as a fraction of the total cell population.
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4

Regulatory T Cell Immunophenotyping

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Metformin (hydrochloride) and AMX were purchased from Sigma-Aldrich (Germany). The following monoclonal antibodies (mAbs) were used for flow cytometric analysis: anti-CD4 FITC, anti-Foxp3 PE, anti-CD25 PerCP, anti-RORγt PE, and Mouse Regulatory T cell Staining Kit, purchased from BD Biosciences (Germany). Enzyme-linked immunosorbent assay (ELISA) kits were purchased from Bioassay Technology Laboratory (China). The DNA extraction kit, viral RNA kit, and RNeasy mini kit were obtained from Qiagen (Germany). cDNA synthesis kit/reagents were purchased from Dena Zist Asia (Iran).
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5

Immunohistochemical and Flow Cytometry Analysis of Neuroinflammation

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Lipopolysaccharide (Escherichia coli 0111:B4) was obtained from InvivoGen. Recombinant mouse IL4 and IL4I1 were obtained from R&D Systems. The following antibodies were used for immunohistochemistry. Primary antibodies: rat anti-CD11b (1:100; AbD Serotec), rabbit anti-Ym1 (1:100; StemCell Technologies), mouse anti-iNOS (1:50; BD Pharmingen), rabbit anti-Olig2 (1:300; Millipore), mouse anti-CC1 (1:300; Millipore), mouse anti-Nkx2.2 (1:100; DSHB), mouse anti-GFAP (1:400; Sigma), rat anti-Tenascin-C (1:100, Abcam), rabbit anti-NF200 (1:100; Sigma), mouse anti-SMI-32 (1:1000; Calbiochem), mouse anti-IST-9 (1:200; Abcam). Secondary antibodies: Alexa Fluor® 488 Goat Anti-Rabbit IgG (1:1000), Alexa Fluor® 488 Goat Anti-Rat IgG (1:500), Alexa Fluor® 594 Goat Anti-Mouse IgG (1:1000), Alexa Fluor® 594 Chicken Anti-Goat IgG (1:500) and Alexa Fluor® 594 Goat Anti-Rat IgG (1:500). Flow cytometry primary antibodies: PE/Cy7 anti-CD4 (BioLegend), Brilliant Violet 711 anti-T-bet (Biolegend), PE anti-RORγt (BD Pharmingen) and PerCP/Cy5.5 anti-Gata3 (BioLegend), anti-NOS2 PE (Santa Cruz Biotechnology) and anti-CD11b APC/Cy7 (Biolegend). LIVE/DEAD® Fixable Yellow Dead Cell Stain Kit (Invitrogen) was used to monitor cell death.
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6

Flow Cytometry Analysis of Immune Cells

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Spleen, mesenteric lymph node (mLN), and ankle joints were processed for flow cytometry as we previously described [13 (link)]. The following antibodies were used for surface molecular staining: BV510-anti-CD45 (30F11), FITC-CD4 (JK1.5), FITC-Lineage (CD3/GR-1/CD11b/CD45R/TER-119), BV421-CD127 (A7R34), PerCP/Cy5.5-KLRG1 (2F1), PE-ST2 (RMST2-2), APC-ICOS (C398.4A), APC-NK1.1 (PK136), PerCP/Cy5.5-Ly6G(1A8), FITC-CD11b(M1/70), APC-F4/80 (BM8, all from BioLegend), and PE-SiglecF (1RNM44N, eBioscience). For intracellular staining, cells were fixed and permeabilized by the FoxP3/Transcription Factor Staining Buffer (eBioscience) and then stained with PE/Cy7-anti-T-bet (4B10), PE-anti-RORγt (AFKGS-9), PerCP/Cy5.5-IFN-γ (XMG1.2, BD Biosciences), APC-IL-4 (11B11, BioLegend), and AF647-IL-17A (TC11-18H10, BD Biosciences) at 4°C for 30 min. In some experiments, mLN cells and splenocytes were plated on a 12-well plate and incubated with cell activation cocktail (with Brefeldin A, BioLegend) at 37°C for 4 h before staining.
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