The largest database of trusted experimental protocols

19 protocols using rpmi 1640

1

Culture and Maintenance of THP-1 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The human monocytic THP-1 cells (ATCC, Manassas, VA, USA) were grown in RPMI-1640 (Welgene Inc., Gyongsan, Korea) supplemented with 10% heat-inactivated fetal bovine serum (FBS, Invitrogen, Gibco BRL, MD, USA), 1% antibiotic-antimycotic (Invitrogen), 10 mM HEPES buffer (Invitrogen), and β-mercaptoethanol (Sigma-Aldrich, St. Louis, MO, USA) at 37°C in a 5% CO2 humidified incubator. To cultivate THP1-XBlue cells (InvivoGen, San Diego, CA, USA), RPMI-1640 medium containing 10% heat-inactivated FBS, 1% antibiotic-antimycotic, and 200 μg/ml Zeocin (InvivoGen) was used.
+ Open protocol
+ Expand
2

Detailed Cell Culture Conditions for Various Cell Lines

Check if the same lab product or an alternative is used in the 5 most similar protocols
For the culture of T2, Jurkat and NA8-Mel cells, RPMI1640 (Sigma) was supplemented with 10% heat-inactivated (56 °C 30 min) fetal calf serum (PAN Biotech), 100 ng/ml penicillin/streptomycin (Sigma), 2 mM L-Glutamine (Sigma), 1 mM Sodium Pyruvate (Sigma),1% MEM non-essential amino acids (Sigma), 50 nmol/l beta-mercaptoethanol (Thermo Fisher) and 10 mM HEPES (Sigma). In later experiments T2, Jurkats, Raji and NA8-Mel cells were cultured in the media described above but replacing the 10% FCS with 2% FCS and 10% of Panexin Basic FCS Replacement (PAN Biotech) which results in identical growth kinetics.
For the culture of human T cells, RPMI1640 was supplemented as described above, but FCS was replaced with 8% heat-inactivated AB+ male donor serum and 50 μM normocin (Invivogen) was added. Recombinant human IL-2 (Peprotech or Proleukin) was always added freshly at the indicated doses.
For the culture of HEK293T cells, DMEM (Sigma) was supplemented with 5% heat-inactivated (56 °C 30 min) fetal bovine serum (FBS, PAN Biotech), 100 ng/ml penicillin/streptomycin (Sigma), 2 mM L-Glutamine (Sigma), 1 mM Sodium Pyruvate (Sigma) and 1% MEM non-essential amino acids (Sigma) and 10 mM HEPES (Sigma).
+ Open protocol
+ Expand
3

Investigating NOD2 Downstream Effects

Check if the same lab product or an alternative is used in the 5 most similar protocols
To identify the role of rs1981760 in NOD2 downstream effects, we stimulated 5–10 × 106 freshly isolated neutrophils resuspended at 2 × 106 cells per ml in RPMI1640 supplemented with 10% foetal calf serum and L-glutamine with 1 μg ml−1 muramyl dipeptide (n-acetyl) and 1 μg/ml Pam3CSK4, (both from Invivogen, UK) for two hours. Primer sequences for quantitative PCR are reported in Supplementary Data 13.
+ Open protocol
+ Expand
4

CMFDA Labeling and CpG Stimulation of Lymphocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Before stimulation, peripheral blood lymphocytes were labeled with CMFDA at a final concentration of 0.1 mg/mL (CellTrackerCMFDA; Molecular Probes, Eugene, OR, USA). The cells were cultured at 5 × 105 cells per well in 96-well plates (Becton Dickinson, San Jose, CA, USA) in complete RPMI 1640 (InvivoGen, San Diego, CA, USA), supplemented with 10% FBS (Hyclone Laboratories, Logan, UT, USA), 2% l-glutamine (Gibco BRL), 5 × 10–5 M 2-beta-mercaptoethanol (Sigma-Aldrich, St. Louis, MO, USA), and 20 mg/mL gentamycin (Gibco BRL). CpG ODN (Hycult Biotechnology, The Netherlands) was added at the concentration of 2.5 mg/mL [45 (link)].
Cell proliferation and phenotype were measured on day 7 by flow cytometry. For ELISPOT cells were used at day 5 of CpG stimulation.
+ Open protocol
+ Expand
5

Investigating ERK1/2 Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-ERK1/2 (Ab-202/204) and Anti-ERK1/2 (Phospho-Thr202/Tyr204) and
anti-β-actin were purchased from Santa Cruz Biotechnology, Santa Cruz, CA, USA.
Clusterin (A-9) (sc-166907, 1:200) was purchased from Santa Cruz (Shanghai,
China). Horseradish peroxidase-conjugated goat anti-mouse and donkey anti-rabbit
antibodies were obtained from Amersham Biosciences. DMEM/F12, RPMI 1640, FBS, and
Normocin antibiotic were all purchased from InvivoGen. PD98059, a specific
inhibitor of ERK kinase was purchased from Biovision, Beijing, China. Mitogen
activated kinase 1 human recombinant (MEK1), the ERK activator kinase 1/2(ERK1/2),
was from Shanghai, China. Cisplatin (DDP) was purchased from Zibo.co, Shandong,
China.
+ Open protocol
+ Expand
6

ROS Production in Fish Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Production of ROS was determined by a real-time luminol-based luminescence assay, as previously described [32 ], with minor modifications. Briefly, HKLs were seeded in RPMI-1640 (Gibco) supplemented with 100 IU p/s at a density of 1 × 106 per well and incubated for 60 min at 27 °C (Nile tilapia) or at 19 °C (rainbow trout) in white 96-well plates (CLS3912; Corning). Subsequently, cells were stimulated with one of the following: RPMI-1640 cell culture medium (negative control), zymosan (positive control; tlrl-zyd, 50 µg mL−1, InvivoGen) or one of the MSP-rich extracts (Table 1) at concentrations of 250, 500, 750, 1000 and 1500 µg mL−1. Per independent experiment, all stimuli were performed on HKLs isolated from the same animal. For each independent experiment, each condition was tested in triplicate. For ROS analysis, n = 4 independent experiments (n = 4 fish) per species was performed. Chemiluminescence emission was measured in real time (every 2 min for 120 min) with a FilterMax F5 Multi-Mode Microplate Reader at 27°C (Nile tilapia) or at 19 °C (rainbow trout), and expressed as fold changes based on areas under the curve [33 (link)]. Fold changes were based on data from stimulated relative to unstimulated HKLs (treated with RPMI).
+ Open protocol
+ Expand
7

Leishmania panamensis Antigen Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
pLAg was prepared by suspending promastigotes of the L. panamensis strain MHOM/COL/81/L13 at a concentration of 1 × 107 parasites/mL, freezing in liquid nitrogen and thawing at 37°C four times. Cells were suspended in RMPI 1640 (Sigma-Aldrich) with 10% FBS (Gibco, Carlsbad, CA), 2 mM L-glutamine, penicillin (100 U/mL) and streptomycin (100 mg/mL) and distributed in 96 well plates in 200 μL per well. For PBMC cultures, 4 × 105 PBMCs and for B cell/CD4 T cell co-cultures, 2 × 105 B cells or 2 × 105 T cells or both cell types were plated per well. Then 8 μL of pLAg were added to the appropriate wells to reach a parasite:cell ratio of 0.2:1. The cells were incubated for 5 days at 37°C with 5% CO2. Cells and supernatants were harvested for evaluation of cell surface markers and cytokine secretion, respectively.
Ramos cells were cultured in RPMI 1640 with 10% heat-inactivated FBS at a concentration of 106 cells/mL with pLAg (107 parasites/mL final concentration), 5 μM CpG ODN 2006 (InvivoGen, San Diego, CA) or no stimulus for 48 hours. Cells were harvested for evaluation of cell surface markers or BCR-mediated endocytosis.
+ Open protocol
+ Expand
8

Measuring Monocyte Bioenergetics

Check if the same lab product or an alternative is used in the 5 most similar protocols
Glycolytic and mitochondrial activity of monocytes was measured using a Seahorse extracellular flux 96 analyzer (Seahorse Bioscience). Monocytes were seeded at a density of 4 × 105 cells/100 µl RPMI1640 (#61870, Gibco, Thermo Fisher) without FCS and adhered for 30 min at cell culture conditions. After two washing steps, 180 µl RPMI 1640 (R1383, Sigma-Aldrich) containing 5% FCS, 2 mM glutamine, and 5 mM glucose or without glucose was added. The injection ports were filled with RPMI 1640 without FCS plus the indicated stimuli or inhibitor (LPS-EB ultrapure from E. coli 0111:B4 strain 100 ng/ml, Invivogen; apocynin 1 mM, Sigma-Aldrich; 2-deoxyglucose (2-DG) 5 mM, Sigma-Aldrich; etomoxir 250 µM, Sigma-Aldrich; BPTES 30 µM, Sigma-Aldrich; dorsomorphin/compound C 10 µM, Abcam). Extracellular acidification rate (ECAR) and oxygen consumption rate (OCR) were determined at 37°C. The parameters of oxidative phosphorylation were analyzed following the injection of the inhibitors oligomycin (1 µM; Cayman Chemicals), FCCP (2 µM; Cayman Chemicals), Rotenone (1 µM; Sigma-Aldrich), and antimycin A (1 µM; Sigma-Aldrich).
+ Open protocol
+ Expand
9

ArtinM Modulates Cytokine Production

Check if the same lab product or an alternative is used in the 5 most similar protocols
Adherent spleen cells or peritoneal macrophages from C57BL/6 (WT) or TLR2 knockout (KO) mice were used to assess IL-12p40 and IL-10 production in response to stimulation with ArtinM. Spleen cells (1×107/mL) were distributed in a 24-well microplate and cultured at 37°Cfor 2 h in a humidified atmosphere with 5% CO2. Cells were washed with RPMI 1640 and incubated with ArtinM (156 nM) or Pam3CSK4 (P3C4, 1 µg/mL) (Invivogen) for 24 h. Peritoneal macrophages (2×106/mL) from WT and TLR2-KO mice were also assayed. Cells were plated in a 96-well microplate and cultivated for 12 h under conditions similar to those adopted for adherent spleen cells. Peritoneal macrophages were incubated for 48 h with ArtinM (39 nM) or P3C4 (1 µg/mL). The amount of IL-12 p40 and IL-10 in the culture supernatants was measured by ELISA, using specific antibody pairs purchased from Pharmingen (San Diego, CA) in accordance with the manufacture's protocol. Murine recombinant cytokines were used to create standard curves. IL-12 p40 and IL-10 cytokine concentrations were determined with reference to the standard curves.
+ Open protocol
+ Expand
10

Eosinophil and Neutrophil Migration Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Eosinophils and neutrophils were collected from whole blood using MACSxpress Neutrophil Isolation Kit, human and Eosinophil Isolation Kit, human, (Miltenyi Biotec) according to the manufacturer’s instructions. Remaining erythrocytes were lysed. Cells were diluted in Complete Medium (CM) consisting of RPMI 1640 (Invivogen, San Diego, CA, USA) with 10% autologous plasma, penicillin 100 U/mL and streptomycin 100 μg/mL (Invitrogen, Carlsband, CA, USA), to a concentration of 1 × 105 cells/ml. Migration set up was conducted with transwell plates (3.0 μm PTFE Collagen Coated Membrane, Corning, NY, USA). Cells were added (5 × 105 neutrophils in the bottom well and 2.5 × 105 eosinophils in the insert) and incubated for 3 h at 37 °C in a humidified 5% CO2 air atmosphere. Inserts were removed and cell suspension in the wells were analysed with flow cytometry using CountBright TM Absolute Counting Beads (Life Technologies, Eugene, OR, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!