The largest database of trusted experimental protocols

3 protocols using zen blue pro

1

Immunohistochemical Profiling of Aortic ECM

Check if the same lab product or an alternative is used in the 5 most similar protocols
Native and decellularised zinc fixed and paraffin embedded tissue sections (from n = 6 human aortas) were stained with monoclonal antibodies against collagen I (Millipore; IgG isotype, polyclonal, 1:500 dilution), collagen III (Millipore; IgG1 isotype, clone IE7-D7, 1:100 dilution), collagen IV (Dako; IgG1 isotype, clone PHM-12, 1:200 dilution), von Willebrand factor (Dako; IgG isotype, polyclonal, 1:400 dilution), fibronectin (Vector; IgG1 isotype, clone 568, 1:150 dilution) and laminin (Sigma; IgG1 isotype, clone LAM-89, 1:1000 dilution). Immunolabeling was carried out using an Ultravision detection system (Thermo Scientific). Antigen retrieval was employed using proteinase K (Dako; room temperature for 20 min—collagen III, von Willebrand factor, fibronectin and laminin), proteinase K followed by trypsin digestion (0.05% w/v trypsin 0.52 mM EDTA.4Na in HBSS with phenol red (Sigma) for 30 s) (collagen IV) and Vector antigen unmasking solution citric based (collagen I). Hydrogen peroxide (Sigma) was used to block endogenous peroxidase activity. Isotype control antibodies (IgG and IgG1; Dako; used at the same concentrations as the test antibody) and omission of the primary antibody served as negative controls. Sections were viewed using Kohler and all images were captured digitally using Zen Blue Pro (Zeiss).
+ Open protocol
+ Expand
2

Histological Characterization of Human Aortic Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Native and decellularised tissue samples from each of six different human aortas were fixed in zinc fixative solution (0.5% w/v zinc chloride (VWR Chemicals), 0.5% w/v zinc acetate (VWR Chemicals), in 0.1 M Tris buffer containing 0.05% w/v calcium acetate (Sigma) at pH 7.4) for 48 h, dehydrated, and embedded in paraffin wax using a Leica Tissue Processor (TP1020). Serial sections (6–8 µm) were stained with haematoxylin and eosin (H&E), picrosirius red/Millers elastin (to visualize collagen and elastin) and alcian blue (glycosaminoglycans, GAGs) using standard histological methods. Cell nuclei were visualised using DAPI dye (Sigma Aldrich); briefly, sections of tissue were rehydrated in a graded alcohol series before they were incubated in the dark in 0.1 µg mL−1 DAPI dye in dye buffer (10 mM Tris, 1 mM EDTA, 1 mM sodium chloride in water) for 10 min. The sections were viewed using an upright Zeiss Imager M2 microscope under normal Kohler illumination or under fluorescent illumination using a DAPI filter (λex = 340–380 nm/λem = 435–485 nm) and images were captured digitally using Zen Blue Pro (Zeiss).
+ Open protocol
+ Expand
3

Quantitative Fluorescence Microscopy Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunostained cells were imaged with a widefield fluorescence microscope (Axioscope 5, Zeiss), using an LED excitation lamp (Colibri 7, Zeiss), a fluorescence camera device (Axiocam 503 mono, Zeiss), objectives with 10 x, 20 x, 40 x (air-based) and 63 x (oil-based) magnification (Zeiss) and Zen imaging software (Zen Blue pro, Zeiss). Exposure time and light intensity were adjusted to avoid excessive sample bleaching and to preclude saturation of fluorescent signal detection. For the analysis of protein expression levels, all images were taken with identical settings regarding laser intensity and exposure time to ensure statistical comparability. For documentation during cell cultivation, images were taken with a brightfield light microscope (DM IL LED, Leica) using objectives with 10x and 20 x (air-based) magnification (Leica) and Las X imaging software (Leica).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!