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13 protocols using esterase

1

Quantification of Airway ROS Levels

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Five healthy and five CF airway mucus samples were ultracentrifuged at 32,000 rpm at 4°C for 1 hour to separate sol phase and gel phase. The sol phase was collected and incubated with 10% (v/v) of the treatment [PBS for healthy and CF control, catalase (100 U/ml), 1 N HCl] at 37°C for 30 min. The samples were then incubated with 1 mM carboxy-H2DCFDA (Life Technologies) and esterase (10 U/ml) (Sigma-Aldrich) at 37°C for 15 min. Serial dilutions of 10 mM hydrogen peroxide (Sigma-Aldrich) in PBS were used as standards. The plate was read at 495-nm excitation/527-nm emission. A standard curve was plotted from the average relative fluorescence unit (RFU) representing the concentrations of the standards. The concentrations of ROS in samples were calculated against the standard curve. Stock solutions of hydrogen peroxide were calibrated by measuring the absorbance at 240 nm. Dividing this absorbance by 43.6 gives the stock concentration in molar units.
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2

Zirconium Carbide Powder Synthesis

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The bulk ZrC powder was purchased from a commercial supplier (Smart‐Elements, Austria) and stored in a dark argon glovebox. Isopropanol (IPA) and ethanol (99.5%, anhydrous) were purchased from Aladdin Reagents (Shanghai, China). PEG‐NH2 was purchased from Shanghai Yare Biotech, Inc. (China). Esterase was purchased from Sigma Aldrich. The AO/PI Assay Kit was obtained from Logos Biosystems (Korea). PBS (pH 7.4), FBS, RPMI‐1640 medium, trypsin‐EDTA, and penicillin/streptomycin were purchased from Gibco Life Technologies. All other chemicals used in this study were of analytical reagent grade and used without further purification. Ultrapure water (18.25 MΩ cm−1, 25 °C) was used to prepare all of the solutions.
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3

Cellular Antioxidant and Anti-Inflammatory Assays

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2,2′-Azobis (2-methylpropionamidine) dihydrochloride (AAPH), 2-methyl-1,4-naphthoquinone (menadione), iron (II) sulfate (FeSO4), hydrogen peroxide (H2O2), LPS (Escherichia coli serotype O111:B4), 5,5′-dithiobis-(2-nitrobenzoic acid) (DTNB), N-acetyl-L-cysteine (NAC), esterase, ConA, mitomycin C, dexamethasone, and BCA protein reagent were obtained from Sigma–Aldrich (St. Louis, MO, USA). The Griess reagent kit and 2’,7’-dichlorodihydrofluorescein diacetate (DCFH-DA) were purchased from Molecular Probes (Eugene, OR, USA). Dulbecco’s Modified Eagle’s medium (DMEM), Roswell Park Memorial Institute (RPMI) 1640 medium, fetal bovine serum (FBS), and streptomycin-penicillin were purchased from GIBCO (Thermo Fisher Scientific, Inc., Waltham, MA, USA). The ONE-Glo luciferase assay system and FuGENE® HD transfection reagent were purchased from Promega (Madison, WI, USA). Hispolon and primary antibodies against phospho-IκBα, IκBα, NF-κB p65, JAK1, phospho-JAK1, STAT3, and transcription factor (TF) IIB were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Primary antibodies against phospho-STAT3 and α-tubulin and anti-rabbit secondary antibodies were purchased from Cell Signaling Technology (Danvers, MA, USA).
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4

Oxidative Stress Assay Protocol

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All solvents used for chromatographic separations (ACS reagent, HPLC, and LC-MS grade) were purchased from Fisher Scientific (Fair Lawn, NJ). Bovine serum albumin (BSA), 2′,7′-dichlorodihydrofluorescin diacetate (H2DCF-DA), digitonin, DMSO, EDTA, esterase, FeSO4, flavin adenine dinucleotide phosphate (FAD), glucose-6-phosphate (G-6-P), glucose-6-phosphate dehydrogenase (G-6-P-D), H2O2, menadione, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), nicotinamide adenine dinucleotide phosphate (NADP), quercetin, L-sulforaphane, Trizma base, and Tween 20, were purchased from Sigma-Aldrich (St. Louis, MO). Cell culture media and supplements were obtained from Life Technologies, Inc. (Grand Island, NY). Deuterated NMR solvents were purchased from Cambridge Isotope Laboratories (Andover, MA).
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5

Nanomaterial Synthesis and Characterization

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Poly(styrene-alt-maleic acid)sodium salt, 13 wt. % solution in water (PSMA, Mw = 350000) (Sigma-Aldrich), poly(4-styrene sulfonic acid-co-maleic acid) sodium salt (Mw = 20000) (Aldrich), poly(maleic anhydrate-alt-1-octadence) (Mw = 30000–50000) (Aldrich), succinic acid (Sigma), maleic acid (99.5%) (Chem Service), quantum dot (Life), hydrogen tetrachloroaurate(III) trihydrate (HAuCl4, 99.99%) (Alfa Aesar), Silver nitrate (AgNO3) (Fisher), Copper(II) chloride dihydrate (CuCl2·2H2O) (Riedel-de Haen), Iron(II) chloride tetradhydrate (FeCl2·4H2O) (J. T. Baker), Hydrazine monohydrate (N2H4·H2O, 98%) (Alfa Aesar), titanium(IV) isopropoxide (97%) (Sigma-Aldrich), tetraethyl orthosilicate (TEOS, 98%) (Sigma-Aldrich), sodium hydroxide (NaOH, min 99%) (Fullin), methylene blue (MB, high purity) (Alfa Aesar), Chlorin e6 (Ce6) (Frontier), doxorubicin hydrochloride (DOX) (Sigma-Aldrich), esterase (Sigma), 3,3′,5,5′-Tetramethylbenzidine (TMB, ≥99%) (Sigma-Aldrich) were purchased for use without purification.
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6

Synthesis of Biocompatible Polymer Nanoparticles

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2-Hydroxyethyl 2′-methyl-2′-bromopro-pionate (HMB) was purchased from Changzhou Yipin Tang Chemical Co. LTD. Chloroauric acid (HAuCl4), Sn (Oct)2, ε-caprolactone (ε-CL) and 2-(2-methoxyethoxy) ethyl methacrylate (MEO2MA) were purchased from Aladdin reagent (Shanghai, China). Calcein-AM, propidium iodide (PI), esterase, methyl thiazolyl tetrazolium (MTT), copper bromide (CuBr) and N, N, N′, N′, N″-pentamethyldiethylenetriamine (PMDETA) were purchased from Sigma-Aldrich (St. Louis, Missouri).
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7

Disodium Cromoglycate Synthesis Protocol

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Disodium cromoglycate (5′DSCG) (98% purity) was obtained from TCI Chemicals (Philadelphia, PA). Tryptone, yeast extract, sodium chloride, Tris base, urea, lauryldimethylamine N-oxide and poly(ethylene) glycol (PEG8000) were purchased from Fisher Scientific (Fair Lawn, NJ) and were used to make Luria Bertani media and buffers. All aqueous solutions were dissolved in deionized water with resistivity greater than 18.2 MΩ cm or deuterium oxide (D2O, 99.9%, Cambridge Isotope Laboratories, Inc., Andover, MA). Casamino acids (Amresco, Solon, OH), peptone (Bio Basic, Amherst, NY) and casitone (BD Biosciences, MD) were also used. l-amino acids (l-glutamic acid, l-alanine, l-arginine), polyvinylpyrrolidone (PVP, MW ∼ 40 000), polyvinylalcohol (PVA, MW ∼ 9000–10 000), poly-acrylamide (PAAm, MW ∼ 9000–10 000), poly(ethylene) glycol (PEG4000), and proteins (lectin A, esterase, lipase, bovine serum albumin and trypsin) were purchased from Sigma Aldrich (St. Louis, MO). Pseudomonas aeruginosa strain PA1244N3 (pPAC46) was obtained from Dr Castric and Dr Horzempa.28,29 (link)
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8

Synthesis and Characterization of MTDZ Prodrugs

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Dextran (MW 70,000), dextranase (Penicillium sp.), esterase, 2,4-dinitrosalicylicacid (DNS), succinic anhydride, carbonyldiimidazole (CDI), and MTDZ were obtained from Sigma-Aldrich Chemical Co. (St Louis, MO, USA). Dimethyl sulfoxide (DMSO)-d6 was obtained from Cambridge Isotope Laboratories (Andover, MA, USA). All reagents and solvents for high-performance liquid chromatography (HPLC) were obtained from Merck (Darmstadt, Germany). All other chemicals used were reagent grade, commercially available products. Infrared (IR) spectra were recorded on a Fourier transform-infrared (FT-IR) spectrophotometer (Varian, Palo Alto, CA, USA). 1H-nuclear magnetic resonance (NMR) spectra were obtained using a Varian AS 500 spectrometer, and the chemical shifts were recorded in parts per million (ppm) downfield from tetramethylsilane. Small molecular colon-specific prodrugs of MTDZ, MTDZ sulfate, and NMG were synthesized as described in previous studies.8 (link),9 (link) Structures of the prodrugs are shown in Figure S1.
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9

Esterase-Mediated FTs Degradation

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The FTs solution was incubated with esterase (Sigma) and hydrogen peroxide for different lengths of time, the degradation of FTs was then monitored by measuring the metal-to-ligand charge transfer band (MLCT) using UV-Vis spectrophotometer (Agilent 8453).
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10

Comparative Evaluation of Lipase Preparations

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Commercially available lipases were used as follows: (i) Immobilized lipases:
Candida antarctica lipase type B immobilized on acrylic resin (CAL-B, 7,300.0 U/g), Thermomyces lanuginosus lipase immobilized on immobead-150 (TLL, 250.0 U/g), Rhizopus oryzae lipase immobilized on immobead-150 (ROL, 340.0 U/g), Pseudomonas fluorescens lipase immobilized on immobead-150 (PFL, ≥ 600 U/g), Pseudomonas fluorescens lipase immobilized in Sol-Gel (AK, ≥ 30 U/g), Pseudomonas fluorescens lipase immobilized in Sol-Gel on pumice (AK, ≥ 8.0 U/g) and Amano lipase PS from Burkholderia cepacia immobilized on diatomaceous earth (PS-IM, ≥ 500 U/g) were acquired from Sigma-Aldrich®, Rhizomucor miehei lipase immobilized in anionic resin (RML, 150.0 U/g) was purchased from Novozymes ® . (ii) Unsupported lipase preparations: Pseudomonas fluorescens lipase (AK, 22,100.0 U/g), Penicillium camemberti lipase (G, 50.0 U/g), lipase from Rhizopus niveus (RNL, ≥ 1.5 U/mg), Amano lipase from Mucor javanicus (MJL, ≥ 10,000 U/g) and lipase from Aspergillus niger (ANL, 200 U/g) were acquired from Sigma-Aldrich ® . Porcine pancreas lipase (PPL, 46.0 U/g solid), and Candida rugosa lipase (CRL, 1.4 U/g) were obtained from Sigma-Aldrich ® . (iii) Esterase, immobilized in Eupergit ® C from hog liver (~200 U/g) was obtained from Sigma-Aldrich ® .
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