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4 protocols using immobilon membranes

1

Western Blot Analysis of Protein Markers

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Proteins were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis on 4%-20% gels using the Mini-Protean system (BioRad). Gels were transferred to Immobilon membranes (Thermofisher Cat # 88518). The membranes were then probed with antibodies to RANK (Orb6560, diluted 1:1000), CD9 (MM2/57, diluted 1:1000), or CD81 (SN206-01, diluted 1:1000) and a horseradish peroxidase-conjugated secondary antibody (ThermoFisher Cat # 65-6120, diluted 1:10,000) was used to detect rabbit primary antibodies and a horseradish peroxidase-conjugated secondary antibody (ThermoFisher Cat # A16066, diluted 1:5000) were used to detect mouse primary antibodies. These were incubated in a chemiluminescent substrate (ThermoFisher, Super Signal West Pico, Cat # 34577), and blots were detected using a BioRad ChemiDoc MP (BioRad). The raw photographs and chemiluminescent data were minimally processed using brightness and contrast controllers equally over the whole blot in Adobe Photoshop for final figures.
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2

Western Blot Analysis of Protein Markers

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Proteins were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis on 4%-20% gels using the Mini-Protean system (BioRad). Gels were transferred to Immobilon membranes (Thermofisher Cat # 88518). The membranes were then probed with antibodies to RANK (Orb6560, diluted 1:1000), CD9 (MM2/57, diluted 1:1000), or CD81 (SN206-01, diluted 1:1000) and a horseradish peroxidase-conjugated secondary antibody (ThermoFisher Cat # 65-6120, diluted 1:10,000) was used to detect rabbit primary antibodies and a horseradish peroxidase-conjugated secondary antibody (ThermoFisher Cat # A16066, diluted 1:5000) were used to detect mouse primary antibodies. These were incubated in a chemiluminescent substrate (ThermoFisher, Super Signal West Pico, Cat # 34577), and blots were detected using a BioRad ChemiDoc MP (BioRad). The raw photographs and chemiluminescent data were minimally processed using brightness and contrast controllers equally over the whole blot in Adobe Photoshop for final figures.
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3

Western Blot Analysis of Immune Signaling

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Protein extracts from the BMDMs and BMDCs were run on 10% SDS-polyacrylamide gels and transferred to polyvinylidene difluoride (PVDF) Immobilon membranes (Thermo). Rabbit anti-STING, anti-cGAS, anti-phospho-IRF3 (Ser 396), anti-IRF3, anti-TBK1, anti-phospho-TBK1 (Ser 172), and horseradish peroxidase (HRP)-conjugated anti-rabbit antibodies, all from Cell Signaling Technology; mouse monoclonal anti-DDX41 (Santa Cruz Biotechnology); and HRP-conjugated anti-mouse antibody (Sigma-Aldrich) were used for detection, using either ECL Western blot detection reagent or ECL prime Western blot detection reagent (GE Healthcare Life Sciences).
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4

Quantifying Protein Expression Efficiency In Vitro

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To determine the efficiency of protein expression in vitro, 4 μl of expression reaction were analyzed by Western blotting. The produced proteins were separated on SDS-polyacrylamide gels and then transferred onto Immobilon membranes (Thermo Fisher Scientific) using the mini-protein tetra cell system (Bio-Rad). After transfer, the membranes were blocked overnight at 4 °C with 5% (w/v) fat-free dry milk in PBS. The membranes were incubated for 1 to 3 h with the primary antibody (anti-GST or anti-Halo) at a 1:10,000 dilution in PBS containing 5% (w/v) fat-free milk and 0.05% (v/v) Tween 20. After washing (three times, 10 min each) with PBS containing 0.05% (v/v) Tween 20 to remove unbound primary antibody, the membranes were kept for 1 h at room temperature with the secondary antibody (mouse anti-goat IgG or anti-rabbit IgG fused to HRP at a 1:15,000 dilution in PBS containing 5% (w/v) fat-free milk with 0.05% (v/v) Tween 20. Excess of secondary antibody was removed by several washes (5–8 times, 15 min each) with PBS containing 0.05% (v/v) Tween 20. The presence of the fusion protein was detected using SuperSignal West Femto Maximum Sensitivity Substrate (Thermo Fisher Scientific) and exposure to X-ray film (Research Products International Corp) according to the manufacturer’s recommendation. In some experiments, the detection of the bands was performed using ChemDoc MP (Bio-Rad).
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