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30 protocols using matrigel

1

Transwell Invasion Assay for Bladder Cancer

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In total, 24 Transwell chambers (8 μm in pore size) were pre-coated with 20 µL Matrigel (Clontech, Mountain View, CA, USA) and incubated for 20 min (37°C, 5% CO2), followed by a further coating step with 20 µL Matrigel for 1 h. For VMCUB-1 and UMUC-3, 3 × 104 cells in 100 μL Opti-MEM® Reduced-Serum medium were added to the upper chamber. For BFTC905, 5 × 104 cells were seeded, and 500 μL of conditioned media was added into the lower chamber. Then, 20 h (VMCUB-1 and UMUC-3) to 24 h (BFTC905) later, non-adherent cells were cautiously removed using a cotton swab. BFTC905 were additionally preincubated with CM media (PCM) for 6 days before the experimental setup. The cells in the chambers were washed with PBS (4°C) and fixed for 10 min with ice-cold methanol and then stained with crystal violet for 25 min. After a further washing step and 20 min of drying time, the membrane was removed with a scalpel and embedded in xylol. The membrane was positioned on a microscope slide and coated with DePeX (Serva, Heidelberg, Germany). Three representative images of each membrane were taken with a Zeiss Axiovert 200. The area covered with invaded cells was analyzed using ImageJ, and an average value was calculated. For each cell line, nine differently conditioned media were analyzed, with each of them representing a pool of six donors.
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2

Transwell Assays for Cell Invasion and Migration

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The effects of miR-340 on A549 cell invasion and migration were analyzed using Transwell assays (Costar, Aiyan Biotechnology Co. Ltd.) with or without Matrigel (Clontech, Laboratories, Inc.), respectively. The A549 cells transfected for 24 h were resuspended in the upper 24-well chambers at a density of 1×105 cells/well. Serum-free DMEM and 10% FBS-DMEM were added to the upper and lower chambers, respectively. After 24 h, cells on the upper membrane were collected using cotton swabs, while cells in the lower chamber were fixed with 100% methanol for 15 min and stained with 0.05% crystal violet (Beyotime Biotechnology Company) for 20 min at 37°C. Invasive and migrated cells were observed under a inverted Fluorescence Microscope IX53 (Olympus). Each assay was conducted in triplicate.
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3

Angiogenic Potential of HUVEC Cells

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Matrigel (10 mg protein/ml, Clontech, MA, USA; 40 μl) was pipetted into a 96-well culture plate and polymerized for 1 h at 37 °C. HUVECs were harvested after trypsin-EDTA treatment, re-suspended in M199 and then plated onto a layer of Matrigel at a density of 2 × 104 cells/well, followed by the addition of 10uM SPC in the absence or presence of 2.5uM KRO-105714. After the Matrigel cultures were incubated at 37 °C for 24 h, the cultures were photographed (X40).
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4

Transwell Cell Migration and Invasion Assay

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The upper chamber of transwell inserts (Corning, Corning, NY) was added with transfected cell samples in serum-free medium for cell migration assay, and the lower chamber was filled with complete culture medium, which contained 10% FBS. Matrigel (Clontech, Madison, WI) was applied to pre-coat the upper chamber for cell invasion assay. After 24 h of cultivation, cells migrated or invaded to the bottom were fixed with methanol, and treated with 0.1% crystal violet. Finally, cells were observed in five random fields with a light microscope.
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5

Transwell-based Cell Migration Assay

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Cell migration assay was conducted using 8-mm pore size Transwell chambers (Corning, Shanghai, China). The lower chamber was filled with DMEM containing 10% FBS. Cells were suspended in serum-free DMEM and plated into the upper chamber. Then, the chambers were cultivated in 5% CO2 at 37°Cfor 2 days. After that, the cells in the upper chamber were removed with cotton swabs and the bottom surface of the polycarbonate membranes was counted visually using 0.1% Crystal violet dye and a light microscope. The invasion assay was same except that matrigel (Clontech, Mountain View, California) was used in the Transwell chambers (Corning, Shanghai, China).
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6

Transwell Migration and Invasion Assays for HCC Cells

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Transwell chambers with 8 µm pores (Corning, Cambridge, MA) were used for the migration and invasion assays. To analyze the invasion abilities of the HCC cells, 2 mg/ml Matrigel (Clontech, Mountain View, CA) was added into the chambers. For migration and invasion assays, 80,000 and 120,000 Hep3B cells/well were seeded, respectively. For Huh7 cells, 60,000 and 80,000 cells/well were used for migration and invasion assays, respectively. The detailed procedure was described in a previous study 32 (link).
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7

Transwell Assay for Cell Migration and Invasion

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The capacity of cell migration and invasion were measured with Transwell assay. The Transwell chambers with or without Matrigel (Clontech Laboratories, Inc., Mountainview, CA, USA) were put into a 24-well plate, thus forming upper and lower chambers. Cell suspension (200 µl) with density of 1×105/ml was plated in the upper chamber and the medium of the suspended cells was free of FBS. The lower chamber was added with 400 µl RPMI-1640 supplemented with 20% FBS. After incubation for 24 h at 37°C, the cells which moved to the lower surface were stained with 0.5% crystal violet for 30 min and the cells on the upper chamber were removed. The cells in the lower chamber were observed with a microscope (BX51 Olympus; Olympus Corp., Tokyo, Japan) and counted at five random fields.
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8

Investigating Tumor Cell Migration

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QGY-7703 cells were transfected with pri-miR-1228, ASO-miR-1228, or the corresponding controls. A 24-well Boyden chamber with an 8 nm pore size polycarbonate membrane (Millicell, Millipore, Merck KGaA, Darmstadt, Germany) was used to analyse the migration and invasion of the tumour cells. For the invasion assay, the membrane was coated with Matrigel (Clontech). Details can be found in the Supplementary Material.
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9

Transwell Invasion Assay for Cancer Cells

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Tanswell chambers (Corning Costar, Beijing, China) with 8 µm pore size membranes were employed to assess invasive ability. Transwell chamber in 24-plate well with Matrigel (Clontech Laboratories, Inc., Mountainview, CA, USA) was coated. T24 or J82 cells with a density of 5×104 were added in the upper chamber in 200 µl medium without FBS. Whereas, 500 µl normal medium with 15% FBS was added in the lower chamber for use as a chemoattractant. The cells were incubated for 24 h, and the unattached cells were removed using cotton swab. The invaded cells were fixed with methanol and then stained using 1% crystal violet; and cell counting was carried out under the microscope BX51 Olympus (Shenzhen, China).
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10

Transwell Assay for Glioma Cell Invasion

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Transwell assay was employed to perform invasive activity with Matrigel (Clontech, Mountain View, CA, USA) added in the Transwell chamber (8.0 µm pore size; Corning Incorporated, Corning, NY, USA). Before test, we suspended glioma cells (1×105) using RPMI-1640 medium, and placed the Transwell chamber into 24-well plate. Cells (200 µl) were then suspensded in the upper chamber, followed by the addition of 500 µl medium containing 15% FBS in the lower chamber and incubation at 37°C for 24 h. The cells that adhered to the lower surface were stained for about 30 min at 37°C using 0.5% crystal violet. The invasive cells were captured using a microscope (BX51 Olympus; Olympus Corporation, Tokyo, Japan) and counted at five random fields.
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