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3 protocols using esc qualified matrigel

1

Standardized Stem Cell Culture Protocol

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Stem cell culture was achieved in line with the ISSCR guidelines (https://www.isscr.org/standards-document). HiPSC lines used in this study were maintained on ESC-qualified Matrigel (Corning), coated plates with mTeSR1 media (Stem cell technology). All cell lines were cultured at 37°C, under normoxic conditions (20% O2, 5% CO2) and culture media was daily replaced. HiPSC were passaged every 4 days at a 1:6 split ratio using passaging solution XF (Miltenyi) for 2 min, at room temperature for dissociation into cell clusters. Cells were grown for 10 passages maximum. A new vial of the cell bank was used when cell reach P30. The MycoAlert kit (LONZA) was employed to confirm the absence of mycoplasma in all cell lines.
The H1-ESC line was developed in the laboratory of Andras Nagy, of which the cells originated from the H1 embryonic stem cell line HA01 (Wi Cell, USA). The CFS were cultured in 6-well culture plates coated with Geltrex™ LDEV-Free, hESC-Qualified, Reduced Growth Factor Basement Membrane Matrix (Thermofisher Scientific). Cells were maintained in mTeSR™ Plus (Stemcell Technologies) that was refreshed daily (1.5mL) and passaged every 4-5 days using ReLeSr (Stemcell Technologies) as per manufacturers’ instructions.
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2

Endothelial Differentiation of iPSCs

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iPSCs were cultured in E8 medium (Thermo) on ESC-qualified Matrigel (Corning) until 80% confluency. The cells (1 to 24 dilution) were then plated onto a growth factor reduced Matrigel coated well in presence of 10 μM of Y-27632 (Selleckchem) in triplicate. 24 hours after plating, the medium was replaced with E8 medium (Thermo) for an additional day. The cells were then cultured for 3 days in DMEM/F12 supplemented with B27 and N2 (Thermo), 5μM CHIR-99021 (Selleckchem) and 25 ng/ml BMP-4 (Peprotech). For the final 2 days, the cells were grown in Stempro34 (Thermo) supplemented with 200ng/ml VEGF (Peprotech) and 5μM Forskolin (LC labs). Endothelial differentiation was performed in triplicates and calculated as CD31+/CD144+ cell percentage through flow cytometry. We differentiated 73 lines from 23 subjects and the cut-off for high versus low differentiation was set at 10% output of CD31+/CD144+ endothelial cells (range 0.99–35.34%)(Table S4)
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3

Cerebral Organoid Generation from hiPSCs

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UNOs were generated from the IMR90 hiPSC (WiCell®) using the Cerebral Organoid Generation and Maturation kit from STEMCELLTM Technologies, which is based on the protocol for UNO generation described by Lancaster et al.26 (link). In short, hiPSCs were detached into a single cell suspension using Gentle Cell Dissociation Reagent (STEMCELLTM Technologies) and seeded in an ultra-low attachment round bottom 96-well plate (Corning) with embryoid body (EB) Formation Medium to obtain EBs. Hereafter, induction of neuroectoderm was obtained using Induction Medium (STEMCELLTM Technologies) followed by expansion of neuroepithelia by embedding EBs in ESC-qualified Matrigel (Corning) and culturing in Expansion Medium (STEMCELLTM Technologies). On day 10 the organoids were placed on an orbital shaker (66 rpm) in Maturation Medium (STEMCELLTM Technologies) and the medium was refreshed every 3–4 days until infection at day 67.
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