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8 protocols using kato 3

1

Gastric Cancer Cell Line Cultures

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The gastric cancer cell lines (AGS, NCI-N87, SNU1, KATOIII and MKN28) and human gastric mucosa cell line (GES1) were obtained from Procell life science and Technology Co., Ltd (Wuhan, China). All the cell lines were cultured in RPMI-1640 medium (GIBCO, Los Angeles, CA, United States) with 10% fetal bovine serum (FBS, Gibco) and at 37°C in a 95% air, 5% CO2 humidified incubator.
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2

Evaluating RP11-789C1.1 in ATR-CHK1 Signaling

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Human GC cell lines (AGS, MKN-45, BGC-823, KATOIII, HGC-27, and SGC-7901) and normal gastric epithelial cells (GES-1) were obtained from Procell Life Science & Technology Co., Ltd., Wuhan, China and Zhong Qiao Xin Zhou Biotechnology Co., Ltd., Shanghai, China. All cell lines were verified by mycoplasma detection and short tandem repeat (STR) profiling. Cells were cultured in RMI-1640 supplemented with 10% fetal bovine serum (Gibco BRL, Grand Island, USA) and Dulbecco's Modified Eagle Medium (DMEM) (Gibco, Grand Island, USA) at 37°C in 5% CO2 atmosphere. To evaluate the effects of RP11-789C1.1 in ATR-CHK1 signaling pathway, the cells were treated with concentrations of AZD6738 (1 µmol/L, S7693, Sellleck, Texas, USA) for 12 hours.
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Gastric Cell Line Culture Protocol

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The gastric epithelial cell line GES-1 and GC cell lines (AGS, BGC-823, HGC-27, MKN-28 and KATO III) were provided by Procell Life Science & Technology Co., Ltd. (Wuhan, China). AGS cells were cultured in Ham’s F-12 (Procell, CN), KATO III cells were cultured in IMDM (Procell, CN), and other cells were cultured in RPMI-1640 (Procell, CN). All culture media were supplemented with 10% fetal bovine serum and 1% penicillin/streptomycin solution. All cells were cultured at 37 °C with 5% CO2.
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4

Quantifying miR-642b-3p in Gastric Cancer Cell Lines

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Five human GC cell lines, SNU-5, AGS, MKN-74, HGC-27, and KATO III and the normal gastric mucosal epithelial cell line GES-1 were purchased from Wuhan Procell Life Science & Technology (Wuhan, China). These cells were recovered and cultured in Roswell Park Memorial Institute (RPMI)-1640 medium (Gibco, Grand Island, NY) supplemented with 10% FBS, penicillin (100 U/mL), and streptomycin (100 mg/mL) under saturated humidity, 5% CO2, and 37°C. When cell confluence reached 90%, serial passaging was performed. The cells were detached with 0.25% trypsin until the cells become round and gaps appeared, which was subsequently terminated by addition of FBS culture solution. Next, the cells were pipetted into a single-cell suspension. Quantitative real-time polymerase-chain reaction (qRT-PCR) was then employed to determine miR-642b-3p expression in GC cell lines [22 (link)].
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5

Gastric Cancer Cell Culture Protocol

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GC cells (GES-1, AGS, HGC-27, KATO III, MKN-1, MKN-45) were purchased from Procell Life Science & Technology (Wuhan, China), and the cells were cultured according to the manufacturer’s instructions. The cell lines were cultured in RPMI-1640 medium (Gibco, USA) and were supplemented with 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin/streptomycin (Gibco).
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6

Gastric Cancer Tissue Collection and Cell Culture

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The Ethics Committee of Hubei University of Medicine (Shiyan, China) approved all research. Archived GC tissue specimens were collected from patients undergoing surgery in Taihe Hospital without radio- or chemotherapy after obtaining written informed consent. The samples were divided into two parts, one was fixed in formalin and another was stored at -80 °C. GC cell lines (KATO-III, BGC-823, MGC-803, SGC-7901, MKN-74, HGC-27) and gastric mucosal epithelial cell line (GES-1) were purchased from Procell (Wuhan, China). Cells were cultured in RPMI-1640 or Hams F12 medium (Gibco, USA) containing 10% fetal bovine serum (FBS; Gibco).
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7

Culturing Human Gastric Cell Lines

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The GES-1 human gastric mucosal epithelial cells and the NCI-N87, KATO3, Hs-746T, HGC-27, and SNU-1 human GC cell lines were obtained from Procell Life Science and Technology Co., Ltd. (Wuhan, China). The SNU-1, KATO3, and HGC-27 cell lines were cultured in Roswell Park Memorial Institute (RPMI)-1640 medium (Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA) supplemented with 10% or 20% fetal bovine serum (FBS) (Gibco; Thermo Fisher Scientific, Inc.), and 1% penicillin-streptomycin solution. The GES-1, NCI-N87, and Hs-746T cell lines were cultured in Dulbecco’s Modified Eagle Medium (Gibco; Thermo Fisher Scientific, Inc.) supplemented with 10% FBS (Gibco; Thermo Fisher Scientific, Inc.), and 1% penicillin-streptomycin solution. All the cells were maintained at 37 ℃ in a 5% carbon dioxide humidified incubator.
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8

Modulation of Gastric Cancer Cell Proliferation

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Normal gastric mucosal epithelial cells (GES-1) and GCcells (AGS, HGC-27, KATO3, MKN-45) were purchased from Procell Life Science & Technology (Wuhan, China), and the cells were cultured according to the manual instructions. A lactate dehydrogenase A (LDHA) inhibitor (GSK2837808A, MCE) was used to treat HGC cell lines. The HGC cell lines were cultured in six-well plates, and plasmids were transfected using Lipofectamine 3000 according to the instructions. The target sequences of the short hairpin RNA (shRNA) were as follows: PLOD2-RNAi (8407-1), caGCAAGTGTCCTTAAGTCAA; PLOD2-RNAi (8408-1), ggAAATGGACCCACCAAGATT; PLOD2-RNAi (8409-1), ctTTGCCGAAATGCTAGAGAA.
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