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513 protocols using m165 fc

1

High-resolution cardiac imaging techniques

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Following isolation, all hearts were examined and photographed using a fluorescent stereo microscope (Leica M165 FC) to confirm plasmid expression. Plated cells were imaged using an Olympus FluoView FV1000 laser scanning confocal microscope. High-magnification in vivo imaging was performed by embedding cardiac tissue in 2% low melting temp agarose as described previously26 (link). Hearts were then imaged on a Zeiss 800 laser scanning confocal microscope. Calcium imaging using GCamp6F was conducted using a Hamamatsu ORCA-Flash4.0 CMOS camera at a rate of 100 fps at room temperature. The camera was mounted either on a Lecia M165 FC stereo microscope (Whole heart) or a Zeiss Axiovert S100TV inverted microscope using a 100× (NA 1.4) oil objective.
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2

Mouse Intervertebral Disc Cell Isolation

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Lumbar spines from 2‐month‐old mice were dissected, followed by microdissection of NP and AF tissues using a fluorescent stereo microscope (Leica M165 FC). Isolated tissues were immediately fixed for RNA extractions. For primary cell culture (overview in Figure 1A), intact IVDs were dissected from 2‐month‐old mice (cervical to caudal) and the AF tissues were microdissected (Leica M165 FC). Isolated AF tissues were transferred to a sterile 3 mm culture dish with 2 mL of type II collagenase (3 mg/mL; Worthington, NJ) in Dulbecco's modified Eagle's medium/Ham's F‐12 medium (DMEM/F12) and incubated for 20 minutes at 37°C. AF tissues were then minced and further digested for 1 hour at 37°C. Digested tissues were triturated and filtered using a 70 μm cell strainer and cells were pelleted by centrifugation (1100 rpm for 5 minutes). Cells were plated at an initial density of ~400  000 cells/cm2 and cultured in DMEM/F12 supplemented with 10% fetal bovine serum (FBS) and 1% penicillin and streptomycin (Thermo Fisher Scientific, MA) at 37°C in a humidified atmosphere of 5% CO2. Media was changed every 2 days until cells reached 80% confluency. AF cells isolated from IVD tissues of two mice were pooled together and used for each experimental replicate.
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3

Collagen Gel Contractility Assay

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Collagen gels were prepared in 96-well plates from a collagen solution (1.85 mg/mL, Cell Biolabs, Beijing, China) by following the manufacturer’s instructions. Briefly, HTM (4 × 106 cells/mL medium) was added onto the collagen gel and incubated for 1 h at 37 °C with 5% CO2. After collagen polymerization, the culture medium was added to each collagen gel lattice. Following a 48-h incubation, the edge of the gel was gently detached using a pipette tip. The gel area was then imaged using a Fluorescent Stereomicroscope (M165 FC, Leica) every hour for 15 h to determine the time required for cessation of the “natural contraction” of the gel by HTM cells. Drugs (NAC (3 mM) or VX-765 (100 μM)) were added to the medium, and images were captured at 6, 24, and 48 h. The gel area was calculated using the Fluorescent Stereomicroscope (M165 FC, Leica, China).
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4

Overexpression of GhBZR3 in Arabidopsis

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The CDS of GhBZR3 was cloned into pBI121 via the SmaI and KpnI restriction sites. After that, this vector was transferred into Agrobacterium tumefaciens using electroporation. The floral‐dip method was (Clough & Bent, 1998 (link)) used for the overexpression of GhBZR3 in Arabidopsis. A stereoscope (M165 FC; Leica Microsystems) was used for the observation of Arabidopsis hypocotyls, roots and root hairs. The transgenic hypocotyls of Arabidopsis were measured using the PI method for 1 h and were observed on a fluorescence microscope (M165 FC; Leica Microsystems).
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5

Isolation and Purification of FeSP Neurons

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The procedure for the isolation and purification of FeSP neurons has been described elsewhere (14 (link)). Briefly, the PMm/PMg region containing GFP-labeled FeSP neurons was dissected from the brain of sham-operated, ovariectomized, ovariectomized plus E2-treated, and ovariectomized plus KT-treated npba-GFP females under a fluorescence stereomicroscope (M165FC; Leica Microsystems, Wetzlar, Germany). Dissected brain tissue was dissociated by papain treatment, triturated through Pasteur pipettes, and suspended in Leibovitz's L-15 medium containing 5% fetal bovine serum. Individual GFP-labeled FeSP neurons were handpicked with a glass pipette mounted on a micromanipulator (Narishige, Tokyo, Japan) under a fluorescence stereomicroscope (M 165FC; Leica Microsystems).
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6

Visualizing BTPDM1 Distribution in Kidneys

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Kidneys were placed on a stereoscopic microscope (Leica M165 FC, Leica Microsystems, Heerbrugg, Switzerland) just after being resected and halved to observe the distribution of BTPDM1. Fluorescence was observed using an excitation filter of 470/20 and an emission filter of 510LP.
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7

Screening Bacterial Colonies for Fluorescence Shifts

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Bacterial colonies on agar plates were screened for bathochromic fluorescence shift on a modified fluorescence stereo microscope (Leica M165 FC, Leica Microsystems) with a coupled mercury metal halide light source (Leica EL6000, Leica Microsystems). Illumination and emitted light was initially split by the microscope dichroic (GFP-LP, Leica) followed by a custom filter cube (ET510/20m, ET537/29m, T525LPXR; Chroma) to produce two narrow-band channels for emission ratiometry. These images were detected by CMOS cameras (Blackfly S Mono 5.0 MP, GigE Vision). A custom MATLAB script displayed the two channels overlaid in false color at a user defined ratio, allowing the user to rapidly visualize subtle spectral variations. Colonies that appeared red-shifted were picked for further analysis.
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8

Immunofluorescence Imaging of F-Actin and Nuclei

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The cells cultured on Ti membrane were fixed with 2% (w/v) paraformaldehyde (Nacalai Tesque) for 15 min, incubated with PBS containing 0.25% Triton X-100 (Sigma-Aldrich®/Merck KGaA, Darmstadt, Germany) (PBS-T) for 10 min to permeabilize cells, and incubated in PBS-T containing 1% (w/v) bovine serum albumin (Sigma-Aldrich®/Merck KGaA) for 30 min to block non-specific binding. The cells were incubated with a 1:20 dilution of Alexa Fluor® 488-conjugated phalloidin (Cell Signaling Technology, Danvers, MA, USA) for 1 h. After incubating with DAPI (InvitrogenTM/Thermo Fisher Scientific) for 1 min to identify the nuclei, the staining of F-actin was evaluated by immunofluorescence microscopy (Leica M165FC) (Leica Microsystems, Nussloch, Germany). All procedures were performed at room temperature. The images were converted to binary using GIMP 2.8.10. The stained areas of nuclei were quantified.
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9

One-incubation ATPS Assay Optimization

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A fluorescent stereo microscope (Leica M165 FC, Leica Microsystems) was
used for all bright field and fluorescence imaging (λex: 490
nm, λem: 520 nm). Investigation of conditions for
one-incubation assay: selection of ATPS system (i.e. ATPS
condition) and blocking buffer were carried out by using custom-fabricated
96-well injection molded black microwell plates with 1.7 mm diameter microbasins
(9 per well) (PHASIQ, Ann Arbor, Michigan), see image of the plate in Electronic
Supplementary Information
(ESI 1)
, Fig.
S2
. Details conditions are given below.
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10

Screening Bacterial Colonies for Fluorescence Shifts

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Bacterial colonies on agar plates were screened for bathochromic fluorescence shift on a modified fluorescence stereo microscope (Leica M165 FC, Leica Microsystems) with a coupled mercury metal halide light source (Leica EL6000, Leica Microsystems). Illumination and emitted light was initially split by the microscope dichroic (GFP-LP, Leica) followed by a custom filter cube (ET510/20m, ET537/29m, T525LPXR; Chroma) to produce two narrow-band channels for emission ratiometry. These images were detected by CMOS cameras (Blackfly S Mono 5.0 MP, GigE Vision). A custom MATLAB script displayed the two channels overlaid in false color at a user defined ratio, allowing the user to rapidly visualize subtle spectral variations. Colonies that appeared red-shifted were picked for further analysis.
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