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Sirt1 sirna

Manufactured by Santa Cruz Biotechnology
Sourced in United States

SIRT1 siRNA is a small interfering RNA designed to target and silence the expression of the SIRT1 gene. SIRT1 is a protein deacetylase enzyme involved in various cellular processes, including metabolism, stress response, and longevity. The SIRT1 siRNA can be used to study the function and regulation of SIRT1 in research applications.

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34 protocols using sirt1 sirna

1

Inhibition of miR-217 and SIRT1 in ARPE-19 Cells

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ARPE-19 cells were plated into 6-well plates and incubated for 24 h before transfection. Cells were transfected with 100 nM inhibitor control (5′-GCCUCCGGCUUCGCACCUCU-3′; Shanghai GenePharma Co., Ltd., Shanghai, China), 100 nM miR-217 inhibitor (antagomir; 5′-UACUGCAUCAGGAACUGAUUGGA-3′; Shanghai GenePharma Co., Ltd.), 0.2 µM control-small interfering (si)RNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.), 0.2 µM SIRT1-siRNA (cat. no. sc-40986; Santa Cruz Biotechnology, Inc.), or 100 nM miR-217 inhibitor + 0.2 µM SIRT1-siRNA using Lipofectamine 2000 reagent for 24 h. Then, we performed RT-qPCR assay to detect the transfection efficiency.
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2

Modulation of miR-217 and SIRT1 in THP-1 Macrophages

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miR-217 inhibitor (5′-UACUGCAUCAGGAACUGAUUGGA-3′; Shanghai GenePharma Co., Ltd.), inhibitor control (5′-GCCUCCGGCUUCGCACCUCU-3′; Shanghai GenePharma Co., Ltd.), control-siRNA (cat. no. sc-36869; Santa Cruz Biotechnology, Inc.), SIRT1-siRNA (cat. no. sc-40986; Santa Cruz Biotechnology, Inc.) or miR-217 inhibitor + SIRT1-siRNA was transfected into THP-1 macrophages (ox-LDL untreated) using Lipofectamine® 2000 reagent (Invitrogen; Thermo Fisher Scientific, Inc.) following the manufacturer's protocol at 37°C for 48 h. Transfection efficiency was measured at 48 h post-transfection using reverse transcription-quantitative PCR (RT-qPCR).
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3

Silencing Sirt1 and Sirt3 in HUVECs

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The siRNA technique was used to silence specific genes in HUVECs. The cells at 40%-50% confluence were transfected with specific siRNA duplexes (60 nM, Santa Cruz Biotechnology) using Lipofectamine RNAiMAX Reagent (Thermo Fisher Scientific) following the manufacturer’s instruction. After 48 h transfection of control siRNA, Sirt1 siRNA or Sirt3 siRNA (Santa Cruz Biotechnology), the cells were incubated with 5.5 mM or 33 mM glucose culture medium in the absence or presence of 3 μM acacetin for 5 days, then collected for western blot analysis. The silencing efficiency of Sirt1 and Sirt3 proteins was significant, which is shown in Supplementary Figure S1.
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4

Knockdown of Sirt1 and Atf5 in Cells

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Cells were transfected with control siRNA (sc-37007), Sirt1 siRNA (sc-40987), or Atf5 siRNA (sc-60222) purchased from Santa Cruz Biotechnology, in combination with Lipofectamine RNAiMAX Reagent (13778150, Invitrogen) following the manufacturer's protocol 50 (link).
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5

SIRT1 and Nrf2 Expression Vectors Transfection

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The SIRT1 expression vector pcDNA3.1-SIRT1 and Nrf2 expression vector pcDNA3.1-Nrf2 were purchased from GenePharma (Shanghai, China). The SIRT1 siRNA was purchased from Santa Cruz Biotechnology (sc-40986, Dallas, TX, USA). Cells were seeded in 96-well plates (1 × 104 cells/well) or 6-well plates (1 × 105 cells/well) and transfected with empty or expression vector (1 μg/mL) or siRNA (50 nM) using Lipofectamine 2000 reagent (Invitrogen, Carlsbad, CA, USA) at 37 °C according to the manufacturer’s instruction. Forty-eight hours later, Western blot analysis was performed to examine the efficiency of transfection. Then, after transfection for 48 h, cells could be used for the subsequent experiments.
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6

Inhibition of miR-181a-5p in Macrophages

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miR-181a-5p inhibitor (5′-ACUCACCGACAGCGUUGAAUGUU-3′) and inhibitor control (5′-UCACAACCUCCUA-GAAAGAGUAGA-3′) were purchased from GenePharma (Shanghai, China). Before transfection, the cells were substituted in an antibiotic-free medium for 24 h, then inhibitor control, miR-181a-5p inhibitor, control-siRNA (cat no. sc-36869; Santa Cruz Biotechnology, Inc., USA), SIRT1-siRNA (cat no. sc-40986; Santa Cruz Biotechnology, Inc.) or miR-181a-5p inhibitor+SIRT1-siRNA were transfected into RAW 264.7 macrophages using Lipofectamin™ 2000 reagent (Invitrogen, USA) following the manufacturer’s instructions. qRT-PCR and western blot analysis were used to measure the efficiency of cell transfection.
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7

Sirtuin-1 Knockdown in H9c2 Cells

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H9c2 cells were seeded at 6 wells plate. Then transfections were carried out using scramble small interfere RNA or sirtuin-1 small interfere RNA (SIRT-1 siRNA, Santa Cruz Biotechnology) and transfection reagent (Inventrigen, Thermo Fisher Scientific) according to the manufacturer's instructions. The transfection solution (volume 400 µl) was prepared in serum-and antibiotic-free DMEM (low glucose) D r a f t medium containing 0.5μg/well siRNA-SIRT-1 or scrambled siRNA and transfection reagent. The mixture was incubated for 20 min at room temperature and then diluted with 600 μl of DMEM medium and then added to the cells for 6 h. This was followed by the addition of 1 ml DMEM containing 20% FBS to the cells and incubation for another 10 h. Then cells were incubated with 35μM high glucose plus or minus EDA for 24h.
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8

Sirt1 siRNA Transfection Protocol

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Sirt1 siRNA and control siRNA obtained from Santa Cruz were transfected using the Lipofectamine reagent, and the experiments were performed as previously described [24 (link)].
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9

SIRT1 Silencing and Oxidative Stress

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Fibroblasts from healthy subjects were cultured in complete medium without antibiotics for 2 days. Cells were seeded into a six-well plate. Then, 8 μl of LipofectamineTM LTX and 3 μL PLUSTM Reagent (Life Technologies, Carlsbad, CA, USA) were diluted in 90 μL of culture medium. Subsequently, 12 μL SIRT1 siRNA (siRNA for SIRT1-sc-40986- from Santa Cruz Biotechnology) was mixed with the medium containing Lipofectamine together with PLUS reagent and incubated for 30 min at RT for complex formation. Finally, cells were incubated with a final SIRT1 siRNA concentration of 100 nM. After 48 h, SIRT1 protein expression was determined by Western blot. To study the possible role of SIRT1 in the oxidative-mediated cell injury, untreated and SIRT1 RNAi-treated fibroblasts obtained from healthy subjects were challenged for 3 h with 500 μM H2O2. ROS production, lipid peroxidation, caspase-3 activity and mitochondrial membrane polarization were evaluated by confocal microscope analysis.
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10

Quantifying Plasma Triglyceride Levels

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Control siRNA and SIRT1 siRNA were purchased from Santa Cruz (Dallas, TX, USA). PX-478 and SRT1720 were purchased from Apexbio (Houston, TX, USA), tunicamycin from Tocris (Bristol, UK) and EX-527 from RayBiotech (Peachtree Corners, GA, USA). Plasma triglyceride levels were analyzed using a commercial kit (Spinreact SA, St. Esteve d’en Bas, Spain).
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