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2 protocols using hexamethoxyphosphazine

1

ESI-MS Analysis of Proteins

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LC-MS grade solvents (acetonitrile and water) and ammonium acetate were purchased from Fisher Scientific. Trimethylamine N-oxide (TMAO) was purchased from Sigma-Aldrich. The low concentration ESI tune mix solution containing betaine, trifluoroacetic acid ammonium salt, hexamethoxyphosphazine, hexakis(2,2-difluoroethoxy) phosphazine, hexakis(1H,1H,3H-tetrafluoropropoxy) phosphazine, hexakis(1H,1H,5H-octafluoropentoxy) phosphazine, hexakis(1H,1H,7H-dodecafluoroheptoxy) phosphazine, hexakis(1H,1H,9H-perfluorononyloxy)phosphazine, hexakis(1H,1H,4H-hexafluorobutyloxy)phosphazine, hexakis(1H,1H,6H-decafluorohexyloxy)phosphazine, hexakis(1 H , 1 H , 8 H-tetradecafluorooctyloxy)phosphazine, tris(trifluoromethyl)-1,3,5-triazine, and tris(heptafluoropropyl)-1,3,5-triazine was purchased from Agilent Technologies. The original tune mix solution was 10-fold diluted with acetonitrile and water. Samples of the proteins ubiquitin, streptavidin, concanavalin A (ConA), and aldolase were purchased from Sigma-Aldrich. Solid protein samples were dissolved in water and further buffer exchanged into 200 mM ammonium acetate buffer with a final concentration of 1–10 μM before it was subjected to mass spectrometry analysis.
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2

Analytical Reagents and Standards

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Ultrapure water was obtained by purifying demineralized water in a Direct-Q 3 UV-R system (Merck, Millipore, Darmstadt, Germany). LC-MS-grade acetonitrile, methanol, ammonium formate, and HPLC-grade chloroform were purchased from Carl Roth GmbH and Co. KG (Karlsruhe, Germany). LC-MS-grade isopropanol was from Merck KgaA (Darmstadt, Germany). LC-MS tuning mix and hexamethoxyphosphazine, used as tuning standards, as well as hexakis(1H,1H,3H-tetrafluoropropoxy)phosphazine, and purine, used as lock masses, were purchased from Agilent Technologies (City of Santa Clara, CA, USA). Acetic acid, ethanol, sodium carbonate, disodium hydrogen phosphate, sodium chloride, potassium chloride, and potassium dihydrogen phosphate (all analytical-grade) were from Carl Roth GmbH and Co. KG (Karlsruhe, Germany). 2,2’-Azino-bis-(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), fluorescein, and trolox (all analytical-grade) were from Sigma-Aldrich Chemie GmbH (Deisenhofen, Germany). 2,2’-Azobis(2-methylpropionamidine) dihydrochloride (AAPH), potassium peroxodisulphate, and gallic acid (both of analytical-grade) were purchased from Fisher Scientific GmbH (Schwerte, Germany). Folin-Ciocalteu phenol reagent (analytical-grade) was obtained from Merck KgaA (Darmstadt, Germany). Acetone (analytical-grade) was obtained from VWR International LLC (Fontenay-sous-Bois, France).
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