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20 protocols using polyoxymethylene

1

Apoptotic Podocyte Immunofluorescence Staining

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The immunofluorescence staining of apoptotic podocytes with the indicated treatments (LG, HG, HS) at the indicated time points (24 and 48 h) was conducted with the Hoechst staining kit (Haoxin Bio-tech, China) according to the manufacturer’s instructions. In detail, the podocytes were treated with 70% (v/v) ethanol for 5 min and washed with 1× PBS 3 times. After that, the cells were fixed with 4% polyoxymethylene (Sigma-Aldrich, USA) and stained with the dyeing working fluid for 10 min. Finally, the morphology of the podocytes was observed and recorded under a fluorescence microscope (Laite, USA).
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2

Aptamer-Based Imaging of Cells and Tissues

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After 2 × 105 mEND-HEK293 and HEK293 cells were seeded in a dish for 12 h, cells were incubated with 250 nM of Cy5.5-labeled aptamer YQ26 (Cy5.5-YQ26) or Cy5.5-labeled library sequence (Cy5.5-Lib) in binding buffer (1 mL) for 30 min on ice. After washing twice, the cells were immersed in polyoxymethylene (Sigma, USA) for 10 min, and then stained with DAPI (Life Co., USA) for 5 min. After washing twice, the cells were imaged by fluorescence microscopy (Nikon, Japan).
Frozen tumor tissue sections of 6 μm thickness were incubated with 250 nM of Cy5.5-YQ26 or Cy5.5-Lib for 30 min. Subsequently, tumor sections were stained with CD31 as described by using rat anti-mouse CD31 antibody (BD Biosciences, USA) and FITC-labeled donkey anti-rat IgG secondary antibody (Life Technologies, USA). After staining the nuclei with DAPI for 5 min, the cells were visually inspected by fluorescence microscopy.
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3

Transwell-based Cell Migration and Invasion Assay

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The Transwell chambers (Nanjing KeyGen Biotech Co., Ltd.) were used to detect cell migration and invasion. For the invasion assay, the Transwell chamber was precoated with Matrigel for 6 h at 37°C. The H1299 and A549 cells were digested and counted. A total of 1×106 cells were mixed with 100 µl DMEM without FBS and plated in the upper chamber. A total of 500 µl medium with 10% FBS were used to cover the bottom chamber as a chemoattractant. Following 24 h incubation in a humidified incubator, the migrated and invaded cells on the reverse side of the chamber inserts were fixed with 4% polyoxymethylene (Sigma-Aldrich; Merck KGaA) for 30 min and stained with 0.1% crystal violet (Sigma-Aldrich; Merck KGaA) for 15 min at room temperature. Cells were counted by imaging five random fields under a light microscope (BX53; Olympus Corporation) at ×400 magnification and the images were recorded.
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4

Fluorescence Microscopy of Cell Binding

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CCRF-CEM and Ramos cells were cultured for 12 h in six-well dishes at a density of 3 × 105 cells per well. Cells were washed three times with PBS and incubated with Sgc8-FSNPs, FSNPs, or FITC-Sgc8, respectively, in binding buffer on ice for 30 min in the dark. Cells were washed three times with PBS, fixed with 4 % polyoxymethylene (Sigma-Aldrich) for 20 min, and stained with 4′, 6-diamidino-2-phenylindole dihydrochloride (DAPI; Life Co., USA) for 5 min in the dark. Finally, cells were washed three times with PBS and examined by fluorescence microscopy (Nikon DS-Ri1, Japan).
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5

Matrigel Invasion and Migration Assays

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Biocoat matrigel invasion chambers (BD Biosciences, Bedford, MA, United States) were used to compare the effect of SLPI knockdown on in vitro invasion of AsPC-1, BxPC-3 and PANC-1 cells as previously described [20 (link),21 (link)]. Briefly, for the invasion assay, Costar Tran-swell 8 μm inserts were coated with 50 μg reduced serum Matrigel (BD Biosciences, Bedford, MA, United States). Invasion Chambers (BD China, Shanghai, China) were coated with Matrigel, and 1 × 106 cells were added per chamber. Medium supplemented with 10% FBS was used in the lower chamber. Following incubation cells that had invaded through the membrane were fixed and stained before the membrane was removed and mounted on a slide for microscopic assessment. Invasive cells were visualized at x40 magnification and the number of cells in five random fields was counted and an average calculated.
For migration assays, the same procedure was used excluding the Matrigel. After 12 h, non-invading cells and media were removed, and cells on the lower surface of the membrane were fixed with polyoxymethylene (Sigma) and stained with 0.1% crystal violet (Sigma) for 0.5 h. Stained cells were counted under a microscope in five randomly selected fields, and the average was used to indicate cell migration and invasion. All experiments were performed in triplicate [21 (link)].
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6

Osteogenesis Regulation by E3330

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DPCs were grown in osteogenic medium containing 10 μM E3330. At days 3 and 5, ALP activity of E3330 treated and untreated DPCs was determined according to the manufacturer’s recommendations with an ALP kit (Jiancheng, Nanjing, China) and normalized on the basis of equivalent protein concentrations. The absorbance of each well was determined using a microplate reader at 520 nm. Calcium deposition in the extracellular matrix was determined by Alizarin Red S staining after 14 days of osteogenic differentiation. Cells were fixed in 4% polyoxymethylene (Sigma-Aldrich, USA) and then incubated in 0.1% Alizarin Red S solution (pH = 4.3; Sigma-Aldrich, USA). Calcium deposition was observed and visualized under a light microscope, and the picture of 6-wells plate was captured by camera.
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7

Osteoblast Induction from Bone Marrow MSCs

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To induce BM-MSCs into osteoblasts, cells were cultured in osteogenic differentiation medium (DMEM (low glucose) supplemented with 10% FBS, 100 U/mL penicillin, 100 μg/mL streptomycin, 2 × 10−4 M L-ascorbic acid, 10−7 M dexamethasone, and 10−2 M β-glycerophosphate disodium salt hydrate (Sigma-Aldrich)) for 14 days [17 (link), 18 (link)]. The differentiation medium was changed every 3 days.
Calcium deposition in the extracellular matrix was determined by Alizarin Red S staining after 7 and 14 days of osteogenic differentiation. Cells were fixed in 4% polyoxymethylene (Sigma-Aldrich) and then incubated in 1% Alizarin Red S solution (pH = 4.3; Sigma-Aldrich). Images of calcium deposition were captured with an Olympus IX51 microscope. To quantify the calcium deposition, 200 μL/well of 1% hydrochloric acid (Sigma-Aldrich) was added and absorbance was measured at 420 nm using a microplate spectrophotometer (BioTek).
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8

Transwell Invasion Assay Protocol

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Transwell invasion test was performed adopting a transwell chamber (Keygen, Nanjing, China) involving matrix gel with 8 μm pore size. The cells are digested and counted. Placing of 1 × 106 cells was in the upper chamber with 100 μL FBS free medium, and the lower chamber was covered with 500 μL medium containing 10% FBS as a chemical attractant. After incubation in a wet incubator for 24 h, removal of non-migrating cells was on the upper membrane surface, fixation of the cells on the lower membrane surface was with 4% polyoxymethylene (Sigma, MO, USA), and staining was with 0.1% crystal violet (Sigma, MO, USA). The cells were counted and the images were recorded via shooting five random fields at 400 × magnification under a microscope (BX53, Olympus, Tokyo, Japan).
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9

Oil Red O Staining of Fixed Cells

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Cells were fixed with 10% polyoxymethylene (Sigma‐Aldrich) for 2 h. Cells were subsequently stained with Oil Red O (Solarbio, Beijing, China) for 30 min and then washed with 60% isopropanol and phosphate‐buffered saline. Cell imaging was carried out using an inverted microscope (Olympus, Southborough, MA, USA).
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10

Characterization of Functionalized Nanoparticles

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Zoledronic acid (zoledronate or Zol) monohydrate, alendronic acid (alendronate or Ale) and disodium clodronic acid (clodronate or Clo) tetrahydrate were from TCI America (Portland, OR). Alexa Fluor 647 (AF647)-labeled Zol was from BioVinc LLC (Los Angeles, CA). Sodium hydrate, calcium chloride, zinc chloride, sodium dihydrogen phosphate, sodium hydrogen phosphate, uranyl acetate (UA) dihydrate, formic acid, formalin, collagenase IV, paraformaldehyde, polyoxymethylene, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), polyoxyethylene (5) nonylphenylether (NP-5) and polyoxyethylene (10) octylphenyl ether (OEP-10) were from Sigma-Aldrich (St. Louis, MO). DOPA monosodium salt and 1, 2-distearoyl-sn-glycero-3-phosphoethanolamine-N-[methoxy (polyethylene glycol)-2000] (DSPE-PEG2K) were from Avanti Polar Lipid, Inc. (Alabaster, AL). Cyclohexane, dimethyl sulfoxide, hexanol, chloroform and ethanol were from Thermo Fisher Scientific Co. (Pittsburgh, PA). APC-labeled anti-mouse CD206 (MMR) antibody was from BioLegend Co. (San Diego, CA). All reagents were used without further purification.
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