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7 protocols using chondroitin sulfate sodium salt from shark cartilage

1

Quantifying DNA and GAG in Chondrogenesis

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Pellets were digested at day 21 of chondrogenic differentiation using 1 mg/mL Proteinase K, 1 mM iodoacetamide, 10 μg/mL Pepstatin A in 50 mM Tris, and 1 mM EDTA buffer (pH 7.6; all Sigma-Aldrich) for 16 h at 56°C, followed by Proteinase K inactivation at 100°C for 10 min. Afterward, to determine the amount of DNA, cell lysates were treated with 0.415 IU heparin and 1.25 µg RNase for 30 min at 37°C, followed by the addition of 30 μL CYQUANT GR solution (Invitrogen). The samples were analyzed using a SpectraMax Gemini plate reader with an excitation of 480 nm and an emission of 520 nm. As a standard, DNA sodium salt from calf thymus (Sigma-Aldrich) was used. To determine the amount of GAG, cell lysates were incubated with 1, 9-dimethylmethylene blue (DMB), as previously described by Farndale et al. (1986 (link)), and analyzed with an excitation of 590 nm and 530 nm. The 530:590 nm ratio was used to determine the GAG concentration. As a standard, chondroitin sulfate sodium salt from shark cartilage (Sigma-Aldrich) was used.
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2

Gelatin Extraction from Greenland Halibut

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Fish gelatin was extracted from the skin of Greenland Halibut (Reinhardtius hippoglossoides), a by-product of industrial fish processing for food, as described below. Standard commercial gelatin type A and B, chondroitin sulfate sodium salt from shark cartilage, hyaluronic acid sodium salt from Streptococcus equi, methacrylic anhydride and 2-Hydroxy-4′-(2-hydroxyethoxy)-2-methylpropiophenone were purchased from Sigma Aldrich, St. Louis, MO, USA and used as received.
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3

Quantification of Glycosaminoglycan Content

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GAG content was quantified by the DMMB assay as described [23] (link). Briefly, samples (n = 10) were freeze-dried to a constant weight, and samples (10 mg) were digested in papain buffer (125 mg/ml papain, 5 mM cysteine–HCl, 5 mM disodium EDTA in PBS) at 60°C for 24 h. Then, 50 µl of each sample was mixed with 250 µl 1, 9-dimethyl-methylene blue (Sigma) in a 96-well microtiter plate and the absorbance was measured at 530 nm. The amount of GAG content was calculated by reference to a standard curve prepared using different concentrations of chondroitin sulfate sodium salt from shark cartilage (Sigma).
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4

Quantification of Chondrocyte GAG Content

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GAG content was detected using 1,9-dimethylmethylene blue (DMB, Sigma-Aldrich) reagent as reported [20 (link)-22 (link)]. Absorbance at 570 nm was measured using a UV-1601 spectrophotometer (Shimadzu, Kyoto, Japan). A standard curve constructed with chondroitin sulfate sodium salt from shark cartilage (Sigma-Aldrich) was used to quantify GAG content in the chondrocyte cultures. Then, total GAG was determined as GAG content versus protein content of the same culture. Meanwhile, chondrocytes were cultured on coverslips, fixed in 10% (w/v) neutral formalin for 15 minutes, stained with 0.5% (w/v) Alcian blue dye and photographed using an AZ100 Microscopes (Nikon, Tokyo, Japan). Relative GAG content was determined as mean absorbance of each positively stained chondrocyte.
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5

Quantitative Sulfated Glycosaminoglycan Assay

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Each individual pellet was digested overnight with 0.1% (w/v) papain (Sigma-Aldrich) in 100 µL papain digestion buffer (200 mM NaPO 4 , 100 mM NaOAc, 10 mM cysteine-HCl, 50 mM EDTA; pH 6.0) at 60 °C in a 0.5 mL Eppendorf tube. Samples were diluted in ultrapure water depending on amount of sGAG content (1:4 or 1:6) to measure sulfated GAG content using the Farndale assay 29 . Hereby, 200 µL of dimethylmethylene blue (DMB) solution (0.05 mM DMB, 41 mM NaCl, 45 mM glycine; pH 3.0) was added to 40 µL papaindigested sample. The absorbance was measured at λ=595 nm using a spectrophotometer (iMark Reader; Bio-Rad). Chondroitin sulfate sodium salt from shark cartilage (Sigma-Aldrich) was used for generation of a standard curve.
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6

MALDI Validation of Chondroitin Sulfate

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A dilution series of digested CS standards were spotted onto a MALDI plate for CS peak validation. Standard used was chondroitin sulfate sodium salt from shark cartilage (Sigma Aldrich, St. Louis, MO, USA). Dilution shown was 5 μM of CS. Samples were brought up in 60 mM ammonium Acetate pH 8 and digested with 4 μg of Chondroitinase ABC. Samples were incubated overnight, shaking at 38°C. Samples were spotted with 0.5 μl of digest solution onto a MALDI plate and sprayed with CHCA as previously described.
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7

Glycosaminoglycan Quantification in Tissue

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Tissues were digested overnight in papain at 60 °C (1.6 U/mL papain, 10 mM L-cysteine; both Sigma-Aldrich). GAG in the digested tissues and in medium samples was quantified utilising the 1,9-dimethylmethylene blue (DMMB, Sigma-Aldrich) assay10 (link). A standard curve was generated using chondroitin sulfate sodium salt from shark cartilage (Sigma-Aldrich). A Quant-iT PicoGreen dsDNA assay kit (ThermoFisher) was used to estimate DNA content in micropellets.
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