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Mouse anti v5

Manufactured by Merck Group
Sourced in United States

The Mouse anti-V5 is a laboratory reagent used for the detection and purification of proteins tagged with the V5 epitope. It is a monoclonal antibody raised against the V5 peptide sequence, which is commonly used as a fusion tag for recombinant proteins. The antibody can be used in various immunochemical techniques, such as Western blotting, immunoprecipitation, and immunoaffinity chromatography, to identify and isolate V5-tagged proteins from cell lysates or other biological samples.

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15 protocols using mouse anti v5

1

Quantifying Viral Protein Encapsidation

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Immunoblotting was conducted to measure the A3 encapsidation in virions and steady state protein levels in cell lysates. Rabbit anti-HA (1:5000, Sigma) and Mouse anti-V5 (1:2000, Sigma) were used for detection of HA-tagged A3H Hap I and V5-tagged A3F 108A/231V, A3F 108S/231I, A3G, and A3C, respectively. Rabbit anti-α-tubulin (1:5000, Sigma) and Mouse anti-p24 (HIV-1 capsid protein) (1:1000, Cat#ARP-3537, NIH AIDS Reagent Program) were used as the loading controls for cell lysates and viral lysates, respectively. Secondary detection was performed using Licor IRDye antibodies produced in goat (IRDye 680 labeled anti-Rabbit, and IRDye 800 labeled anti-Mouse). Blots were scanned via LICOR CLx. For quantification, Image Studio was used to detect the pixel intensity of the experimental and loading control bands. Each sample was normalized to its own loading control before comparison to other lanes.
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2

Western Blot Protein Detection Protocol

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Western blots were performed as previously described (Moretto et al., 2018 (link)). Protein extracts were prepared using the trichloroacetic acid (TCA) extraction protocol. After SDS-polyacrylamide gel electrophoresis (4%–20% gradient), proteins were transferred onto PVDF membranes. The membranes were then incubated overnight primary antibodies in blocking buffer. Mouse anti-v5 (R96025, Sigma-Aldrich (MO, USA)) was used at a 1:2000 dilution and rabbit anti-hexokinase antibody (H2035, Stratech (Newmarket, UK)) at a 1:8000 dilution. Membranes were then washed in PBST buffer and incubated with IRDye 800CW goat anti-mouse and IRDye 680RD donkey anti-rabbit secondary antibodies (LI-COR (NE, USA)) at a 1:15000 dilution for LI-COR detection. Protein levels were detected on an Odyssey Imager for LI-COR detection.
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3

Comprehensive Viral Protein Immunodetection

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For plaques, immunostaining, and PLA, primary antibodies used were mouse anti-RSV N (Novus Biologics, Cat. No. NB100-64752 1:500 dilution), human anti-RSV F (Palivizumab, Medimmune, 1 μg/mL), mouse anti-RSV P (Abcam, Cat. No. ab94965, 1:1000 dilution), mouse anti-RSV M2-1 (Abcam, Cat, No. ab94805, 1:1000 dilution), goat anti-panRSV (Abcam, Cat. No. ab20745, 1:1000 dilution), rabbit anti-FLAG (Cell Signaling Technology, Cat. No. 14793S, 1:1000 dilution), mouse anti-V5 (Sigma Aldrich, Cat. No. V8012, 1:500 dilution), mouse anti-Myc (Cell Signaling Technology, Cat. No. 2276S, 1:1000 dilution), mouse anti-Myc-AF488 (Cell Signaling Technology, Cat. No. 2279S, 1:250 dilution), rabbit anti-HA (Santa Cruz, Cat. No. sc-805, 1:1000 dilution), and mouse anti-HA-AF488 (Novus Biologics, Cat. No. NBP2-50416AF488, 1:100 dilution). All respective secondary antibodies for immunostaining (Jackson Immunoresearch, Thermo Fisher) were used at 4 μg/ml. Secondary antibodies for PLA (Sigma Aldrich) were used according to manufacturer’s instructions.
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4

Denaturing Co-Immunoprecipitation Protocol

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Traditional co-IP was carried out as previously described [61 (link)]. For denaturing co-IP of crosslinked proteins, irradiated parasites were lysed in a 1% SDS/50 mM Tris, pH 8.0/150 mM NaCl buffer and boiled at 100°C for 10 minutes to completely denature protein complexes. The lysate was centrifuged, and the supernatant was diluted 10-fold to RIPA conditions prior to IP. Precipitated proteins are either eluted in sample buffer or by high pH with a 100 mM triethylamine solution and dried using a vacuum concentrator. Colloidal Coomassie staining was accomplished using GelCode Blue Stain (ThermoScientific). Gel slices were excised and processed for mass spectrometry. IPs were performed using rat anti-HA (Roche) or mouse anti-V5 (Sigma) agarose beads.
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5

Western Blot Protocol for Protein Detection

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Embryos were collected and dechorionated, then boiled in 2x Laemmli buffer and loaded on 4–12% gradient Bis-Tris gels (NuPAGE, Invitrogen). After SDS-PAGE according to Invitrogen’s protocol, proteins were transferred to a Nitrocellulose membrane (0.22 µm, Odyssey LI-COR) for 2 hr at 100V, blocked with 5% milk powder in blocking solution (PBS with 0.2% Tween) for 1 hr, overnight incubation with primary antibody in blocking solution at 4°C, 3x washed with washing solution (PBS with 0.1% Tween) and followed by 1 hr incubation with secondary antibody (1:15000, goat IRDye, LI-COR)in blocking solution. After three washes with washing solution, the membranes were air-dried, and fluorescent signal were detected with Odyssey CLx imaging system (Odyssey CLx LI-COR). Antibodies used were: mouse anti-V5 (1:1000, Sigma Aldrich, V8012), anti-alpha tubulin (1:10000, Sigma Aldrich, T6199).
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6

Immunostaining and Western Blotting Protocol

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Antibodies used for cell and embryo immunostaining were as follows: mouse anti-Dlg (1:50, Developmental Studies Hybridoma Bank), rabbit anti-GFP (1:500, Molecular Probes) and mouse anti-V5 (1:500, Sigma). For Western blotting, the following antibodies were used: rabbit anti-pan-arrestin (1:1000, Affinity Bioreagents) and mouse anti-SBP (1:200, Santa Cruz). Secondary antibodies were from Invitrogen (immunofluorescence) and LI-COR (Westerns). For immunofluorescence staining, embryos were collected on apple juice/agar plates with yeast paste at 25 °C and fixed in 4% formaldehyde in PBS/heptane, then devitellinized in methanol. Embryos were rehydrated in PBT (1 × PBS with 0.1% Tween-20, Sigma) and incubated for 2 hrs at room temperature in blocking buffer (1:1 of PBT and Roche blocking buffer, Sigma), then incubated with primary antibody diluted in blocking buffer overnight at 4 °C. Embryos were washed with PBT containing 0.1% IgG-free BSA, re-blocked with blocking buffer and incubated with fluorescent secondary antibodies (Invitrogen) diluted in blocking buffer for 1 hr at room temperature. After washes in PBT, embryos were mounted with Prolong Gold anti-fade mounting reagent with DAPI (Invitrogen), and images were acquired with Zeiss LSM 880 confocal microscope.
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7

Antibodies for Drosophila Neural Development

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Antibody used in this study were guinea pig anti-Dpn, 1:1000, [42 (link)]; rat anti-Ase, 1:500, [42 (link)]; chicken anti-GFP (Abcam); rabbit anti-Brat, 1:100, [9 (link)]; mouse anti-pH3 (Cell Signaling Technology); mouse anti-V5 (Sigma-Aldrich); mouse anti-Myc (9E10); mouse anti-Flag M2 (Sigma-Aldrich); mouse anti-Lamin ADL67.10 (DSHB); mouse anti-Bruchpilot nc82, 1:10 (DSHB); guinea pig anti-Mira, 1:250; rabbit anti-Hamlet, 1:50 (home-made, [42 (link)]); rabbit anti-Dichaete, 1:1000, [65 (link)]; mouse anti-Eyeless, 1:10 (DHSB), rat anti-Grainy head, 1:1000, [14 (link)].
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8

Antibody Characterization for Western Blot and Immunostaining

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The following primary antibodies were used for Western blot and immunostaining assays: Mouse anti-Flag (1:5000, Sigma-Aldrich, Cat#F1804); Rabbit anti-Myc (1:3000, Medical & Biological Laboratories, Cat#562); Mouse anti-dTrbd (1:1000), which was generated to an N-terminal fragment of dTrbd (amino acids 155-253) fused to His and purified from E. coli; Rabbit anti-dTak1 (1:1000, Abcam, Cat#239353); Mouse anti-β-Tubulin (1:3000, Cowin, Cat#CW0098M); Rabbit anti-HA (1:2500, Medical & Biological Laboratories, Cat#561); Mouse anti-GFP (1:2000, Sigma-Aldrich, Cat#G6539); Mouse anti-V5 (1:5000, Sigma-Aldrich, Cat#V8012).
The secondary antibodies for Western blot and immunostaining assays include Goat anti-Mouse IgG H&L (HRP); Goat anti-Rabbit IgG H&L (HRP); Goat anti-Mouse IgG H&L (Alexa Fluor 555) (1:1000, Abcam, Cat#ab150078).
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9

Protein Interactions by Pull-down and Co-IP

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For the pull-down assay, GST-tagged MIF or AIF proteins immobilized glutathione Sepharose beads were incubated with 500 μg of HeLa cell lysates, washed in the lysis buffer, and eluted in the protein loading buffer. For coimmunoprecipitation, 1 mg whole-cell lysates were incubated overnight with AIF antibody (1 μg/ml) in the presence of protein A/G Sepharose (Santa Cruz Biotechnology), followed by immunoblot analysis with mouse anti-Flag antibody (Clone M1, Sigma), mouse anti-V5 (V8012, Sigma) or Goat anti-MIF (ab36146, Abcam). The proteins were separated on denaturing SDS-PAGE and transferred to a nitrocellulose membrane. The membrane was blocked and incubated overnight with primary antibody (50 ng/ml; mouse anti-Flag; rabbit anti-AIF; or Goat anti-MIF) at 4°C, followed by horseradish peroxidase (HRP)–conjugated donkey anti-mouse, anti-rabbit or anti-goat for 1 hour at RT. After washing, the immune complexes were detected by the SuperSignalWest Pico Chemiluminescent Substrate (Pierce).
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10

Antibody Sourcing for Western Blot

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Antibodies were purchased from the following sources: Cell Signaling Technologies (Beverly, MA, USA): rabbit anti-HA (#3724); Thermo Fisher Scientific: mouse anti-V5 (#R960-25); Sigma: rabbit anti-β-actin (#A2066); Biolegend (San Diego, CA, USA): mouse anti-HA (#901513).
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