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4 protocols using cd3 apc cy7 clone sk7

1

Flow Cytometric Immune Cell Profiling

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After 72 h of co-culture, non-adherent cells were transferred to a new plate and 5 μg/mL of Brefeldin A was added. Four-hours later, plates were centrifuged for 3 min at 500 × g and supernatants were removed. Cells were prepared for labeling with cell surface marker monoclonal antibodies (mAb) or conjugated intracellular cytokine mAb as recommended by BD Biosciences. The following mAb conjugates were used: CD3-APCCy7 (clone SK7, BD Biosciences), CD4-PE Texas red (clone S3.5, Caltag/Invitrogen), CD8-PerCPCy5.5 (clone SK1, BD Biosciences), IFNγ-FITC (clone 25723.11, BD Biosciences), MIP-1β-PE (clone D21-1351, BD Biosciences), CD107a-APC (clone H4A3, BD Biosciences), TNF-Brilliant violet 421 (clone MAb11, BioLegend), IL17A-Alexa F700 (clone N49-653, BD Biosciences). Aqua Viability Dye (Molecular Probes/Invitrogen) was added to distinguish live and dead cells. Cells were acquired using an LSRII flow cytometer (BD Biosciences) with FACSDiva software (BD Biosciences). Results were analyzed using FlowJo software (Tree Star).
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2

Leukocyte Uptake of Polymersomes

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Isolated
leukocytes (5 × 105, 100 μL) were plated per
well of a sterile 96-well round-bottom plate (Falcon, Corning) and
mixed with 5 μL of BODIPY-labeled polymersomes in a cell:particle
ratio of 1:5 or 1:50. A polymer amount of 0.385 mg was estimated to
correspond to 5 × 109 polymersomes. To block particle
uptake, leukocytes were incubated with Cytochalasin D (Sigma) at a
final concentration of 10 mM for 15 min at 37 °C, prior to adding
polymersomes. The cells were incubated with polymersomes for 30 or
60 min at 37 °C, 250 rpm. Subsequently, the cells were stained
with LIVE/DEAD Fixable Dead Cell Stain Kit-Far Red (Invitrogen) according
to manufacturer’s recommendations and followed by fluorescent
labeling of cell markers: CD45-BV510 (clone HI30, BD Biosciences),
CD14-PE-Cy7 (clone HCD14, Biolegend), CD66b-BV421 (clone G10F5, BD
Biosciences), CD56-PE (clone C5.9, Cytognos, Spain), and CD3-APC-Cy7
(clone SK7, BD Biosciences). Flow cytometry data were collected on
a BD LSR II (BD Biosciences) and analyzed using FlowJo 10.2 Software
(Figure S1). Dead cells and CD45 negative
events were excluded from the data analysis.
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3

Comprehensive Immune Cell Profiling

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According to the manufacturer’s instructions, the freshly isolated target cells were stained with the following monoclonal antibodies: CD45-BV605 (clone HI30, BD Biosciences), CD3-APC-Cy7 (clone SK7, BD Biosciences), CD8-APC-R700 (clone RPA-T8, BD Biosciences), CD4-BV510 (clone SK3, Biolegend), CD25-BB515 (clone 2A3, BD Biosciences), Foxp3-BB700 (clone 236A/E7, BD Biosciences), PD-1-PE-Cy7 (clone EH12.1, BD Biosciences), Tim-3-BV421 (clone F38-2E2, Biolegend), VISTA-PE (clone B7H5DS8, eBioscience), and TIGIT-AF647 (clone A15153G, Biolegend). Nonreactive isotype-matched antibodies were used as controls. At least 30,000 CD45+CD3+ cells per sample were acquired for analysis with a BD Canto flow cytometer (BD Biosciences), and data were analyzed using the Flowjo software (Flowjo LLC).
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4

Multiparameter flow cytometry immune cell sorting

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Following phosphate-buffered saline (PBS) washing, single cell suspension from tumor tissue was washed and resuspended in 100 µL of flow cytometry staining buffer (PBS with 1% fetal calf serum (FCS) and 0.1% sodium azide). Fc receptor (FcR) Blocking Reagent, human (Miltenyi Biotec, Bergisch Gladbach, Germany) was used to block FcR. Cells were stained with cell surface antibodies against CD3-APC-Cy7 (clone SK7, BD Pharmingen, San Jose, USA), CD4-PE (clone RPA-T4, BD Pharmingen), CD8-FITC (clone RPA-T8; BD Pharmingen), CD33-APC (clone WM53, BD Pharmingen) and 7-AAD viability dye (eBioscience, San Diego, USA) to exclude dead cells and gate on live cells.
Cells were washed with flow cytometry staining buffer then re-suspended in Pre-Sort buffer (BD Biosciences). BD FACSAria III SORP cell sorter on BD FACSDiva software (BD Biosciences) was used for sorting pure CD8+ (7AADCD3+CD4CD8+CD33), CD4+ (7AADCD3+CD4+CD8CD33) and CD33+(7AADCD3CD4CD8CD33+) populations. The sorting strategy is shown in figure 1A. We used stringent gating strategy and applicable measures to ensure minimal sorter-induced cell stress. High purities of sorted immune cell populations were always checked and confirmed. FlowJo V.10 software (FlowJo, Ashland, USA) was used for data analyzes.
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