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2 protocols using irdye 800cw donkey anti goat igg secondary antibody

1

Western Blot Analysis of BLM Protein

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Total protein was extracted from the cells or tissues using lysis buffer containing protease inhibitors. Proteins (30 µg) from each sample were loaded on 10% SDS-polyacrylamide gels for electrophoresis. Following electrophoresis, the proteins were transferred onto polyvinylidene difluoride membranes (GE Healthcare, Chalfont, UK), which were then blocked with 10% non-fat milk in Tween/Tris-buffered salt solution (TTBS; 20 mm Tris-Cl, pH 7.5, 0.15 M NaCl and 0.05% Tween-20) for 1 h. Following incubation with the anti-BLM antibody (Santa Cruz Biotechnology, Inc., Dallas, TX, USA) at 4°C overnight, the membrane was washed and incubated with IRDye® 800CW donkey anti-goat IgG secondary antibody at room temperature for 2 h followed by LI-COR Odyssey gel imaging scanner detection (LI-COR Biosciences, Lincoln, NE, USA). To verify equal loading of protein, the blots were reprobed with primary monoclonal antibody against β-actin (ProteinTech Group, Inc., Chicago, IL, USA).
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2

Western Blot Analysis of FAN1 Protein

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Cells were washed once in DPBS and lysed with RIPA buffer (Sigma-Aldrich) containing cOmplete, EDTA-free Protease Inhibitor Cocktail Tablets (Merck). Protein samples were denatured at 70 °C for 10 minutes in 4× NuPAGE LDS Sample Buffer (Life Technologies). Next, 40 µg of cell protein extract per sample was separated on NuPAGE 4–12% Bis-Tris gradient gels (Life Technologies) alongside PageRuler Plus Prestained Protein Ladder (Thermo Fisher Scientific) using MOPS SDS NuPAGE Running Buffer (Invitrogen) at 200 V for 50 minutes. Where purified proteins were run, 30 ng of protein per lane was loaded. Gels were then transferred to methanol-activated Immobilon-P PVDF membranes (Sigma-Aldrich) using NuPAGE Transfer Buffer (Invitrogen) at 120 V for 45 minutes. The membrane was blocked in 5% milk in PBS-T and incubated overnight at 4 °C with anti-FAN1 (CHDI, sheep polyclonal, 1:1,000) and anti-β-tubulin (UpState, 05-661, mouse monoclonal, 1:10,000). Donkey anti-mouse IgG Alexa Fluor 680 (Invitrogen, A32788, 1:10,000) and IRDye 800CW donkey anti-goat IgG secondary antibody (LI-COR Biosciences, 926-32214, 1:15,000) were used as secondary antibodies. Immunoblots were visualized with the Odyssey CLx Imaging System using β-tubulin as a loading control.
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