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7 protocols using anti mir control

1

Silencing SNHG15 through miR-141 in Osteosarcoma

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The siRNAs specifically targeting SNHG15 (si-SNHG15–1, si-SNHG15–2 and si-SNHG15–3), scrambled negative control (si-control), pcDNA-SNHG15, empty pcDNA vector (vector), miR-141 mimics (miR-141), mimics negative control (miR-control), anti-miR-141 and anti-miR-control were commercially synthesized by Genepharma (Shanghai, China). For transient transfection, U2OS and MG63 cells were plated into six-well plates (2 × 105/well) and routinely maintained for 24 h at 37 °C. Then the cells were transfected with siRNAs, pcDNA-SNHG15, vector, miR-141, miR-control, anti-miR-141, anti-miR-control, si-SNHG15 + anti-miR-141, si-SNHG15 + anti-miR-control, pcDNA-SNHG15 + miR-141, or pcDNA-SNHG15 + miR-control by Lipofectamine 2000 (Invitrogen) according to the manufacturer’s protocol. Subsequent experiments were performed at 48 h post transfection. The sequences of si-RNAs, anti-miR-141 are as follows: si-SNHG15–1 (Sense: 5′-CAG GTA GAC CGT GCA CGT AA-3′, Anti-sence:3′-CCT TGA TGC GTT GCC AGC AGA-5′), si-SNHG15–2 (Sense: 5′-CCG TGC GTA AAC GTT TGC CA-3′, Anti-sence: 3′-TGG CGG TAA CGT AAA TGC G-5′), si-SNHG15–3 (Sense: 5′-ACG GTG GCA ACG TGC GTG GCC A-3′, Anti-sence: 3′-GCC TGC AAC GGT GCA AAT GCG-5′), anti-miR-141 (CCA UCU UUA CCA GAC AGU GU UA).
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2

Culturing and Transfecting Human Coronary Artery Endothelial Cells

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Human coronary artery endothelial cells (hCAECs) were purchased from Lonza (Basel, Switzerland) and were cultured in endothelial cell growth medium consisting of endothelial basal media and EGM-2MV Bullet Kit (Lonza, Basel, Switzerland) at 37 °C in an atmosphere of 95% air and 5% CO2. Culture media were replaced every 2 days, and the cells were used between passages 6 and 8. When the cells reached 70–80% confluency, a final concentration of 100 nM of synthetic miR mimics (Catalog No. 4464066; Invitrogen, Carlsbad, CA, USA) or anti-miRs (Catalog No. 4464084; Invitrogen, Carlsbad, CA, USA) was transfected into the cells with lipofectamine RNAiMAX reagent (Invitrogen, Carlsbad, CA, USA). At 6 hours post-transfection, the media were replaced, and the cellular lysates were collected 24 hours later for total protein or RNA isolation. A random sequence anti-miR (anti-miR-control, Ambion, Austin, TX, USA) or random sequence pre-miR (pre-miR-control, Ambion, Austin, TX, USA) was used as negative controls, respectively.
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3

Silencing miR-92a in Podocytes

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MicroRNA-92a inhibition was achieved in vitro by transfecting primary culture podocytes with anti-miR-92a inhibitor using Hiperfect transfection reagent (Qiagen). Anti-miR-Control was used as a control (All from Ambion, 50 nM).
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4

Lung Cancer Cell Culture Assay

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Human lung cancer cells (A549 cells) and mouse lung cancer cells (LLC cells) were purchased from the China Cell Culture Center (Shanghai, China) and cultured in DMEM supplemented with 10% fetal bovine serum (GIBCO, Foster City, CA), all cells were incubated in a 5% CO2 at 37°C in a water-saturated atmosphere. Anti-EPB41L3 and anti-GAPDH antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). Synthetic oligonucleotides, including pre-miR-223, anti-miR-223, and scrambled negative control (pre-miR-control and anti-miR-control), were purchased from Ambion (Austin, TX).
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5

HuR and miR-21 Regulation in Oxidative Stress

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HeLa cells were maintained in standard conditions in Dulbecco's modified Eagle's medium (DMEM) supplemented with heat-inactivated 10% fetal calf serum, 2 mM L-glutamine, and 1% antibiotics (100 units/ml penicillin-streptomycin). The GST-HuR expression plasmid was described previously [38 (link)]. Transfections of siRNA, or miRVana microRNA mimics and inhibitors were performed using Lipofectamine RNAiMax (Life Technologies). Briefly, 2.5 × 104 HeLa cells were seeded in 12-well plates for 24 hours. Transfections were performed at a final concentration of 20 nM HuR siRNA (AAGUCUGUUCAGCAGCAUUGGUUdTdT, Dharmacon), nonsilencing control (Qiagen, Cat. # 1022076), miR-21 mimic (Ambion, Cat. # 4464066), miR negative Control mimic (Ambion, Cat. # 4464058), anti-miR-21 (Ambion, Cat. # 4464084), anti-miR control (Ambion, Cat. # 4464076). Cells were treated in the presence of 0.5 mM H2O2 for 4 hours. Cells were harvested for analysis after the indicated time points as described below.
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6

Pre-miR-93 Modulation in Cell Experiments

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Synthetic pre-miR-93, anti-miR-93 and scrambled negative control RNAs (pre-miR-control and anti-miR-control) were purchased from Ambion (Austin, TX, USA). The cells were seeded onto 6-well plates or 60-mm dishes and transfected using Lipofectamine 2000 (Invitrogen) on the following day when the cells were approximately 70% confluent. In each well, equal amounts of pre-miR-93, anti-miR-93 or scrambled negative control RNA were used. The cells were harvested at 24 h after transfection for quantitative RT-PCR analysis and Western blotting.
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7

Investigating miR-625-3p in Colorectal Cancer

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SW480 cells were transfected with miR-625-3p mimics (Invitrogen, Shanghai, China) or a miR-625-3p mimics control (negative control, NC) (Invitrogen) using the Lipofectamine 2000 reagent (Invitrogen) following the manufacturer’s protocol. SW620 cells were transfected with miR-625-3p inhibitor (anti-miR-625-3p, Invitrogen) or inhibitor NC (anti-miR-control, Invitrogen) using the Lipofectamine 2000 reagent. Forty-eight hours after transfection, cells were collected for further assays as described before [46 (link)].
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