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2 protocols using t6793 monoclonal

1

Immunocytochemistry Protocol for Acetylated Tubulin

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The cells were fixed by applying 4% paraformaldehyde solution for 20 min and permeabilized with 2 mg/ml BSA (Serva, Heidelberg, Germany) diluted in 0.2% Triton X-100/PBS for 10 min on ice. Nonspecific binding was blocked by 3% BSA diluted in 0.02% Triton X-100/PBS (blocking solution) for 30 min. Primary and secondary antibodies were diluted in blocking solution. The following primary antibodies, dilutions. and incubation times were used: antiacetylated α-tubulin (1/5000, T6793 monoclonal; Sigma-Aldrich), antihistone H3 acetyl k9+k14 (1/1000, 9677L; Cell Signaling), and antineuronal class III β-tubulin (802001, 1/500, overnight; BioLegend, San Diego, CA, USA). The following secondary antibodies, corresponding dilutions, and incubation times were used: donkey antimouse IgG (Alexa fluorophore-conjugated, 1/5000, 1 h; Life Technologies, Carlsbad, CA, USA) or donkey anti-rabbit IgG (Alexa fluorophore-conjugated, 1/5000, 1 h; Life Technologies). After subsequent washing with 1.5% BSA in 0.02% Triton X-100/PBS, the cover slips were mounted with 4,6-diamidino-phenylindole-containing Vectashield (Vectorlabs, Burlingame, CA, USA) to visualize the nuclei. Fluorescent micrographs were taken using a Zeiss Axio Imager M1 microscope (Carl Zeiss, Oberkochen, Germany) equipped with an AxioCam MRm3 camera (Carl Zeiss).
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2

Histone Extraction and Western Blot Analysis

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Cells were washed with phosphate-buffered saline (PBS) and collected using the EpiQuik Total Histone Extraction Kit (EpiGentek). Protein concentrations were determined using the micro BCA kit (Thermo-Fisher Scientific) according to manufacturer’s protocol. Protein samples were supplemented with reducing sample buffer (Thermo Scientific) and denaturized by incubating at 95 °C for 5 min. The nonspecific binding was blocked by incubation of the PVDF membrane in 5% bovine serum albumin (BSA), diluted in Tris Buffered Saline Tween (TBST, 50 mM TRIS, 150 mM NaCl, 0.1% Tween-20 (Applichem) for 1 h at room, temperature followed by incubation with primary antibodies overnight. The antibodies, diluted in TBST, were directed against α-tubulin (1:5000, T6199, Sigma-Aldrich), acetylated α-tubulin (1:5000, T6793 monoclonal, Sigma-Aldrich), histone H3 acetyl k9+k14 (1:1000, 9677L, Cell Signaling), and histone 4 (1:1000, ab10158, Abcam). Secondary antibodies conjugated with horseradish peroxidase (Dako, 1:5000, 1 h, RT) where used prior to detection with ECL substrate (life technologies) with a LAS 4000 Image Analyzer (GE Healthcare). Luminescent signals were quantified with ImageQuant TL 7.0 software (GE Healthcare) and then graphed with GraphPad Prism software. A mild reblotting buffer (Merck Millipore Corp.) was applied to strip the blots.
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