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9 protocols using rabbit anti cd133

1

Immunocytochemical Characterization of CD133 and CD34

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Immunocytochemical procedures were performed as described previously50 (link). Briefly, cells were collected by pipetting in PBS, plated on coverslips coated with poly-L-lysine (Sigma-Aldrich) and fixed. Cells were concurrently incubated with primary antibodies (rabbit anti-CD133, Abcam; goat anti-rat CD34, R&D Systems) at 4 °C overnight. The nuclei of cells were counterstained with DAPI (Sigma).
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2

Immunohistochemical Analysis of EBF1 and CD133

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MMNK1 (60,000 cells/well), ox-MMNK1-L (60,000 cells/well), CCA cell lines (30,000 cells/well) were placed on 48-well plates for overnight. The cells were fixed with 4% paraformaldehyde-containing PBS for 30 min at room temperature. After washing, 0.2% (v/v) Triton-X100 solution was added. The cells were washed with PBS and incubated for 30 min with PBS containing 0.3% (v/v) hydrogen peroxide for endogenous hydrogen peroxide activity blocking and non-specific binding was blocked by 3% (w/v) BSA in PBS for 30 min. Cells were incubated with 10 µg/ml of rabbit anti-EBF1 polyclonal antibody (Abcam, MA, USA) or 9 µg/ml of rabbit anti-CD133 (Abcam, MA, USA) at room temperature for overnight followed by peroxidase-conjugated Envision™ secondary antibody (DAKO, Glostrup, Denmark). The color was developed with DAB substrate kit (Vector Laboratories, Inc., CA, USA) and washed with distilled water. The stained cells were dehydrated with stepwise (5 min/step) increasing concentrations of ethanol (70%→80%→90%→100%) and air dried overnight. The stained cells were examined under an inverted microscope.
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Immunohistochemical Characterization of Cardiac Cells

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Immunohistochemical assessments were carried out on frozen cardiac tissue. Briefly, sections were fixed in 4.2 % paraformaldehyde (BD Biosciences, San Jose CA) for 15 mins, followed by permeabilization and blocking with normal goat serum for 30 minutes at room temperature. Slides were incubated with primary antibodies (Abcam, Cambridge, MA): rabbit anti-CD133 (Catalog # ab19898; used at 1:25), rat anti-CD45 (Catalog # ab30446; used at 1:25), and mouse anti-SSEA-4 (Catalog # ab16287; used at 1:20). The sections were then washed with PBS-Tween, and then incubated with all three secondary antibodies (Abcam, Cambridge, MA) at room temperature for 30 minutes: goat anti-rabbit IgG (Alexa Fluor 488; Catalog # ab150081; used at 1:200), goat anti-rat IgG (Alexa Fluor 647; Catalog # ab150167; used at 1:200), goat anti-mouse IgG (Alexa Fluor 555; Catalog # ab150118; used at 1:200). The sections were finally incubated with 0.1% Sudan Black B (Sigma Aldrich, St. Louis, MO) for 30 minutes. ~20 adjacent areas were imaged at 40x magnification using Nikon Confocal Microscope A1 (Nikon, Tokyo, Japan) in the University of Kentucky Confocal Microscopy facility. Cell numbers were expressed as cells/high power field (HPF). Cell numbers are expressed as cells/HPF.
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4

Investigating Cancer Stem Cell Markers

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The following antibodies were used in the experiments: allophycocyanin (APC)-conjugated mouse anti-CD44 from BD Biosciences, phycoerythrin (PE)-conjugated mouse anti-CD133 from Miltenyi Biotec, rabbit anti-CD44, rabbit anti-CD133, and mouse anti-OGT from Abcam, Alexa 647-conjugated rabbit anti-mouse from Invitrogen; rabbit anti-β-tubulin from Cell Signaling Technology (Danvers, MA, USA); Alexa 488-conjugated goat anti-rabbit from Molecular Probes, Inc., (Eugene, OR, USA), mouse anti-O-GlcNAc (RL2) from Thermo Fisher Scientific; mouse anti-GAPDH from Santa Cruz Biotechnoloigy Inc (Sta. Cruz, CA, USA).
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5

Immunofluorescence staining of cancer stem cell markers

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For immunofluorescence staining on tissue sections, CCSCs, mCCSCs and cCCSCs cells antibodies/antisera used were: mouse anti-Human Nuclei (1:100, Millipore-Merk KGaA, Darmstadt, Germany), mouse anti-BMI1 (1:100, Merk Millipore), rabbit anti-EpCAM (1:50, Cell Signaling, Beverly, MA, USA), rabbit anti-ALDHA1 (1:50, Cell Signaling), rabbit anti-bCatenin (1:50, Cell Signaling), rabbit anti-CD133 (1:100, AbCam, Cambridge, UK), rabbit anti-OLFM4 (1:200, AbCam), rabbit anti-CDX2 (1:100, AbCam), rabbit anti-CK20 (1:100, Abcam), rabbit anti-Lgr5 (1:50, Merk SigmaAldrich), rabbit anti-Laminin (1:400, Merk SigmaAldrich), mouse anti-Vimentin (1:100, Agilent, Santa Clara, CA, USA), mouse anti-HLA-ABC (1:100, Agilent), goat anti-EphA2 (1:50, R&D System, Minneapolis, MN, USA), mouse anti-CXCR4 (1:100, R&D System), rabbit anti-KI67 (1:200, Leica Microsystem, Wetzlar, Germany), mouse anti-CD44 (1:50, BD Biosciences, San Jose, CA, USA), rabbit anti-Wnt5a (1:50, LS Biosciences, Seattle WA, USA), mouse anti-MUC2 (1:50, Novusbio, Littleton, CO, USA). Goat anti mouse AlexaFluor488/546 (1:1000, Thermo Fisher Scientific, Waltham, MA, USA), goat anti rabbit AlexaFluor488 (1:1000, Thermo Fisher Scientific) and donkey anti goat AlexaFluor488 (1:1000, Thermo Fisher Scientific) secondary antibodies were used to visualize the primary antibody staining.
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6

Characterization of Schwann Cell Markers

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Monolayer-cultured rBM-NCPs were fixed with 4% (wt/vol) paraformaldehyde, blocked, and then incubated with primary antibodies, including rabbit-anti-CD133 (1:200, Abcam), rabbit-anti-p75 (1:1000, Cell Signaling), rabbit-anti-nestin (1:50, Sigma), mouse-anti-vimentin (1:25, Sigma), mouse-anti-CD29 (1:100, Sigma), and rabbit-anti-Ki67 (1:200, Sigma), overnight at 4 °C, followed by reaction with FITC-anti-rabbit-IgM (Sigma), Cy3-anti-rabbit-IgM (Santa Cruz), TRITC-anti-mouse-IgM (Santa Cruz) or FITC-anti-mouse-IgM (Sigma), and Hoechst 33342 (Sigma) counterstaining. The cell samples were observed under a confocal laser scanning microscope (TCS SP2, Leica Microsystems, Germany).
Induced Schwann cells were subjected to immunofluorescent staining with mouse anti-S100β (1:250, Sigma), rabbit-anti-glial fibrillary acidic protein (anti-GFAP, 1:200, DakoCytomation), and rabbit-anti-p75 (1:1000, Cell Signaling Technology) respectively, followed by the same reaction with the second antibody and Hoechst 33342 counterstaining.
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7

Histological and Immunofluorescence Analysis of Kidney Samples

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Samples were prepared for histological and immunofluorescence analyses by following standard protocols for paraffin embedding. For histological analysis, mounted kidney sections were stained by hematoxylin and eosin.
For immunofluorescence staining, the sections were blocked with 5% normal bovine serum in PBS for 30 min. Sections were then incubated with primary antibodies overnight at 4°C. The primary antibodies used were as follows: mouse anti-VEGFR2 (1:200; Abcam, UK), rabbitanti-CD133 (1:200; Abcam), goat anti-fibronectin (1:200; Abcam) and rabbit anti-CD31 (1:200; Abcam). After being washed in PBS, sections were then incubated in 488- or 594-conjugated species-specific secondary antibody (1:100; Chemicon, USA) for 2 hours. Slides were observed with an Olympus fluorescent microscope and images were captured using Olympus soft image viewer. The intensity of immunoreactivity was quantified using the Image-Pro Plus 6.0 software (Media Cybernetics, USA).
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8

Immunofluorescence Staining of Stem Cell Markers

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The cultured DP cells were fixed using 4% (w/v) paraformaldehyde fixation for 10 min. The cells were permeabilized for 5 min using PBS with 0.3% Triton X-100 (T8787, Sigma). Blocking was performed for 30 min using 3% (w/v) bovine serum albumin in PBS. The primary antibodies including rabbit anti-CD133 (1:500; Abcam, Cambridge, MA, USA), mouse anti-SOX2 (1:200; SantaCruz, Santa Cruz, CA, USA) and rabbit anti-Versican (1:500; Bioss) left overnight at 4 °C. The next day, the primary antibodies were washed off using three consecutive PBS washes. The secondary antibody, Alexafluor 594 goat anti-rabbit (1:1000; Thermo, Agawam, MA, USA)/Alexafluor 488 rabbit anti-mouse (1:1000; Thermo) was applied for 1 h at room temperature. The nuclei of cells were counterstained with DAPI (C1005, Beyotime) for 5 min at room temperature after removing the secondary antibody using three consecutive PBS washes. The coverslips were mounted using anti-fade reagent and the cells were visualized on a Zeiss Exciter fluorescent microscope. The specific information on all the antibodies used is listed in Supplementary Table S1.
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9

Immunostaining of Neural Stem Cell Markers

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Cells were xed 4% paraformaldehyde in 0.2M phosphate-buffered saline (PBS) for 20 min, were permeabilized in 0.3% Triton X-100 in PBS for 5 min and blocked with 10% normal goat serum for 10 min at room temperature, respectively. Then, cells were incubated with the appropriate antibody overnight at 4°C. The primary antibodies were rabbit anti-nestin (1:250; Abcam), rabbit anti-CD133 (1:500; Abcam), rabbit anti-GFAP (1:300, Abcam), rabbit anti-MAP2 (1:300, Abcam), rabbit anti-OLIG2 (1:300, Abcam). Following washing with PBS, the cells were incubated with secondary FITC-conjugated goat anti rabbit antibody (1:1000; Abcam) and FITC-conjugated goat anti mouse antibody (1:1000; Abcam) for 2 h at room temperature. Nuclei were stained with DAPI (blue). Finally, immunopositive cells were observed using inverted uorescence microscopy.
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