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Sephacryl s 100 hr

Manufactured by GE Healthcare
Sourced in United States

Sephacryl S-100 HR is a size-exclusion chromatography medium used for the separation and purification of biomolecules, such as proteins, peptides, and nucleic acids, based on their molecular size. It is a highly cross-linked agarose-based resin that provides high resolution and desirable flow characteristics. The product is suitable for both analytical and preparative applications in laboratory settings.

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8 protocols using sephacryl s 100 hr

1

Purification and Characterization of Momordica charantia L. Seed Proteins

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Momordica charantia L. seeds were obtained from the Institute of Agricultural Science and Technique of Sichuan Province, China. Electrophoresis reagents were products of Sigma-Aldrich (St Louis, MO). Macro-Cap-SP, SP-Sepharose FF, Sephacryl S-100HR and ampholyte were purchased from GE Healthcare Bio-Sciences AB (Uppsala, SE). Dulbecco's Modified Eagle's Medium (DMEM) and fetal bovine serum (FBS) used in cell culture were from Gibco BRL (Grand Island, NE). The lung adenocarcinoma A549 cell line was obtained from American Type Culture Collection (ATCC CCL-185) (Manassas, VA). LMW Calibration Kit was supplied by SIBAS (Shanghai, China). pUC18 DNA used in detection of topological activity was obtained from TAKARA (Dalian, China). All other chemical reagents were standard commercial products of analytical grade.
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2

Purification and Bioassay of Antlion Extract

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Sephacryl-S100-HR (GE Healthcare) was packed into a column (16 mm × 60 mm), which was equilibrated with 2 column volumes of 50 mM Tris-HCl buffer (pH 7.4) containing 0.15 M NaCl at 1 mL/min. After concentration by ultrafiltration using a Microsep centrifugal device (3 kDa molecular weight cut-off, Pall Corporation), 1 mL of the proteinaceous antlion extract was loaded onto the top of the gel. The column was eluted with the equilibration buffer at 0.5 mL/min, and the eluent was collected into 2 mL aliquots. The antiproliferative activity of each fraction against MG-63 human osteosarcoma cells was measured using an 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) cell viability assay.
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3

Purification of Mutant Cytochrome c Peroxidase

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Mutations were made to an E. coli codon-optimized gene for cytochrome c peroxidase by site-directed mutagenesis via PCR with primers containing the desired mutant sequence. The gene was contained within a pET-17b plasmid bearing an ampicillin resistance cassette. Mutant proteins were transformed into BL21-DE3 high-efficiency chemically competent E. coli (New England Biolabs) and expressed and purified by a protocol previously described and modified by our lab.28 (link),72 (link),75 (link) Briefly, cells were cultured overnight in LB (rich) media, induced with 0.5 mM IPTG, and pelleted after 3–4 h of expression. Cell pellets were lysed by sonic disruption, and the clarified soluble supernatant was subjected to anion exchange chromatography (DEAE Sepharose Fast Flow anion exchange resin, GE Healthcare) in phosphate buffer (50 mM, 1 mM EDTA, pH 7.0) eluted on a linear gradient of potassium chloride (0–500 mM) followed by gel filtration chromatography (Sephacryl S-100 HR, GE Healthcare) in potassium phosphate buffer (100 mM, pH 7.0). The major peak fractions were pooled, assessed for purity by mass spectrometry (ESI-MS), and further purified as necessary by separation on Q Sepharose Fast Flow (GE Healthcare) strong anion exchange resin (eluted on a linear potassium chloride gradient) until the hemoprotein content was minimal.
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4

Characterization of Antrodia camphorata Mycelial Extracts

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The lyophilized powders of A. camphorata mycelium were obtained from Dr. Min Ye in the School of Pharmaceutical Sciences, Peking University, Beijing, China. Diethylaminoethyl (DEAE) sepharose Fast Flow and Sephacryl S-100HR were commercially purchased from GE Healthcare Life Science. T-series Dextrans were obtained from Amersham Pharmacia Biotech (Little Chalfont, Buckinghamshire, UK). Monosaccharide standards were all purchased from Fluka, Switzerland. Dimethyl sulfoxide (DMSO) was obtained from Merck (Darmstadt, Germany), whereas 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazoliumbromide (MTT) came from Sigma-Aldrich, St. Louis, MO, USA. Sodium borohydride (NaBH4), iodomethane (CH3I), and trifluoroacetic acid (TFA) were all from Sinopharm Chemical Reagent Co. Ltd. Other reagents were analytical grade unless otherwise stated.
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5

Recombinant RGD-hirudin Production in Pichia pastoris

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Accelrys Discovery Studio (DS, version 3.1) was used for homology modeling (MODELER) [16 (link)] and docking simulation (ZDOCK) [17 (link),18 (link)]. Pichia pastoris cells carrying the RGD-hirudin gene (Mut+) and pPIC9k-RGD-hirudin plasmid were stored in our lab. Briefly, the RGD-hirudin gene was synthesized in the Key Laboratory of Molecular Medicine at Fudan University. cDNA encoding RGD-hirudin was cloned into the plasmid pPIC9K, and this expression vector was transformed into Pichia pastoris GS115. Vector integration into the Pichia pastoris chromosome was confirmed by PCR [14 (link),19 ]. DNA primers were synthesized by Sangon Biotech (Shanghai) Co., Ltd. The Site-Directed Mutagenesis Kit was purchased from SBS Genetech Co., Ltd. Yeast nitrogen base was obtained from Sigma Aldrich Co., Ltd. Blood plasma was obtained from the Shanghai Blood Center. Sephacryl S-100 HR, Sephadex-G50, and Q-Sepharose-FF were purchased from GE Healthcare Co., Ltd. The Biacore T100 instrument and research grade CM5 chips were purchased from Biacore (GE Healthcare) Co., Ltd. Other reagents were of analytical purity.
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6

Enzymatic Assay for Alpha-Glucosidase Activity

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p-Nitrophenyl-α-d-glucopyranoside, α-glucosidase (EC 3.2.1.20, from Saccharomyces cerevisiae), 1-phenyl-3-methyl-5-pyrazolone and monosaccharide standards (d-mannose, l-rhamnose, d-glucose, d-glucuronic acid, d-galacturonic acid, N-acetyl-β-d-glucosamine, d-glucose, d-galactose, d-xylose, l-arabinose, and l-fucose) were obtained from Sigma–Aldrich (St. Louis, MO, USA). Pullulan standards (Mw: 5.9, 9.6, 21.1, 47.1, and 107 kDa) were obtained from Showa Denko K.K. (Tokyo, Japan). Q Sepharose Fast Flow and Sephacryl S-100/HR were obtained from GE Healthcare Life Sciences (Piscataway, NJ, USA). Bicinchoninic acid (BCA) protein assay kit and glucose assay kit with o-toluidine were obtained from Beyotime Biotechnology (Shanghai, China). STZ and rosiglitazone were obtained from Aladdin Chemical Co., Ltd. (Shanghai, China). Mouse insulin enzyme-linked immunosorbent assay (ELISA) kit was obtained from Solarbio Biotechnology (Beijing, China). The assay kits for TC, TG, HDL-C and LDL-C were obtained from Nanjing Jiancheng Bioengineering Institute (Nanjing, China).
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7

Purification of Transthyretin Protein

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The TEV cleavage was loaded on 5 ml HisTrap TM FF column (GE Healthcare) with a flow rate of 1 ml/min. The protein DSBC and TEV protease with 6His-tag were binding on the column. The TTR was recovered in the unrestrained fraction and dialyzed for 3h against buffer containing 100 mM Tris HCl pH 8, 150 mM NaCl using a Spectra/Por® Dialysis Membrane (MWCO: 3500). The last step was a purification of TTR on Size-exclusion chromatography (SEC) Sephacryl ® S-100 HR GE Healthcare in buffer 100 mM Tris HCl pH 8, 150 mM NaCl. TTR was concentrated to 5.38 mg/ml.
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8

Preparation and Characterization of Sulphated Polysaccharides

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GY785 DR was obtained by a free-radical depolymerization process, as previously described [43 ,44 (link)]. Briefly, 2.5 g of the native EPS were solubilized in water (350 mL) and an aqueous solution of hydrogen peroxide was added dropwise to depolymerize the EPS in the presence of copper (II) acetate used as catalyst. After overnight reduction using sodium borohydride and purification on Chelex® 20 resin, the solution containing EPS was ultrafiltrated on a 10 kDa cut-off membrane and freeze-dried. To obtain homogeneous fractions of GY785 DR with low polydispersity, a predominant population of polysaccharide chains was selected by a gel filtration chromatography on either Superdex® 30 (GY785 DR of ~20,000 g/mol) or Sephacryl S-100 HR (GY785 DR of ~200,000 g/mol) (GE Healthcare Life Sciences), using an AKTA FPLC system coupled with a refractometric detector (Gilson®). Samples eluted with water were pooled and freeze-dried.
Highly sulphated GY785 DRS was obtained by a chemical sulphation of GY785 DR of ~20,000 g/mol, as described earlier [43 ,44 (link)]. GY785 DR (50 mg) in its pyridinium salt form was firstly solubilized in anhydrous DMF (100 mL) for 2 h at 45 °C under continuous stirring and then sulphated for the next 2 h at 45 °C in the presence of SO3∙Py (250 mg). The final aqueous solution (pH 7) was dialyzed against water for 3 days before being freeze-dried.
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