Crosslinked cells were resuspended in 500 µL lysis buffer (150 mM NaCl; 5 mM EDTA; 0.5% [v/v] NP40; 500 mM Tris-HCl, pH 7.5; 1 mM PMSF; 1 tablet/50 mL protease inhibitor cocktail [Roche]; 1 mM DTT) and an equal volume of acid-washed glass beads (425–600 μm, Sigma) was added. The cells were lysed using a FastPrep−24 benchtop homogeniser (M.P. Biomedicals) at 4°C for 3 × 60 s at 6.5 m/s with a 5 min rest between cycles, until >90% of the cells were lysed as confirmed microscopically. The insoluble fraction was pelleted by centrifugation at 13,200 rpm for 10 min and the supernatant isolated and analysed by western blot.
Fastprep 24 benchtop homogeniser
The FastPrep−24 benchtop homogeniser is a laboratory instrument designed to efficiently homogenise and disrupt a wide range of sample types. It utilises high-speed reciprocating motion to agitate samples with beads, effectively breaking down the material for further analysis or processing.
2 protocols using fastprep 24 benchtop homogeniser
Cross-linking and Cell Lysis Protocol
Crosslinked cells were resuspended in 500 µL lysis buffer (150 mM NaCl; 5 mM EDTA; 0.5% [v/v] NP40; 500 mM Tris-HCl, pH 7.5; 1 mM PMSF; 1 tablet/50 mL protease inhibitor cocktail [Roche]; 1 mM DTT) and an equal volume of acid-washed glass beads (425–600 μm, Sigma) was added. The cells were lysed using a FastPrep−24 benchtop homogeniser (M.P. Biomedicals) at 4°C for 3 × 60 s at 6.5 m/s with a 5 min rest between cycles, until >90% of the cells were lysed as confirmed microscopically. The insoluble fraction was pelleted by centrifugation at 13,200 rpm for 10 min and the supernatant isolated and analysed by western blot.
Optimized DNA Extraction from Faeces
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