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1

Western Blot Analysis of Signaling Proteins

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Cells were harvested and lysed in SDS lysis buffer (PMSF, Protease, and Phosphatase Inhibitor Cocktail added) for 30 min at 4°C. Total protein was extracted from tissues with T-PER Tissue Protein Extraction Reagent (Pierce, Rockford, IL, USA) according to the manufacturer's protocol. The proteins were dissociated and separated by SDS/PAGE and then transferred to PVDF membranes, which were incubated with primary antibodies. The primary antibodies used for western blotting and their sources were as follows: anti-SEMA3C (Proteintech, 19242-1-AP), anti-GAPDH (Proteintech, 60004-1-Ig), anti-p-ERK1/2 (Cell Signal Technology, #4370), anti-ERK1/2 (Cell Signal Technology, #4695), anti-p-EGFR (Cell Signal Technology, #3777), anti-EGFR (Proteintech, 18986-1-AP), anti-p-Her2 (Cell Signal Technology, #2244), anti-Her2 (Cell Signal Technology, #2244), anti-Her2 (Proteintech, 18299-1-AP), anti-p-MET (Cell Signal Technology, #3077), anti-MET (Proteintech, 25869-1-AP), anti-p-SRC (Cell Signal Technology, #6943), and anti-SRC (Proteintech, 11097-1-AP). Antigen-antibody complexes were detected using horseradish peroxidase-conjugated secondary antibodies (Cell Signaling Technology #7074; #7076) with enhanced chemiluminescence (ECL) western blot detection reagent (Merck Millipore) according to the manufacturer's protocol.
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2

Comprehensive Antibody Panel for Cellular Signaling

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The following antibodies were used: anti-B7-H3 (Proteintech #66 481–1-Ig); antiphospho-p38 MAPK (Thr180/Tyr182) (CST #4511); anti-p38 (CST #9212); antiphospho-eIF4E (S209) (HUABIO #ET1608-66); anti-eIF4E (Proteintech #66 655–1-Ig); anti-HER2 (Proteintech #18 299–1-AP); anti-α-tubulin (Beyotime Biotechnology #AF5012); anti-β-actin (Proteintech #6009–1-Ig); anti-PDL1 (CSB-MA878942A1 m); anti-EGFR (ZENBIO# 201012); HRP conjugated goat antirabbit IgG goat polyclonal antibody (HUABIO #HA1001); and HRP-conjugated goat antimouse IgG goat polyclonal antibody. Antibodies for flow cytometry, including PerCP-Cy5.5-antimouse CD45, FITC-antimouse CD11B, APC-antimouse B7-H3, APC-Cy7-antimouse CD3, FITC-antimouse CD4, BV510-antimouse CD8, APC-antimouse F4-80, BV421-antimouse CD86, PE-antimouse CD206, and PE-antihuman B7-H3, were all purchased from Biolegend.
Cells were treated with the following reagents: SB203580 (Beyotime Biotechnology# S1863); recombinant human TNF-alpha protein (Sinobiological# 10602-HNAE); and lipopolysaccharide (LPS) (Biosharp#BS904).
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3

Apoptosis and Necroptosis Pathway Regulation

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DHQ3 and 17-DR were obtained as described previously. They were dissolved in dimethyl sulfoxide (DMSO, Biosharp, Hefei, China) and stored at −20 °C. MG132, Nec-1, DAPI (4,6-diamidino-2-phenylindole), and 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were purchased from Sigma-Aldrich (St. Louis, MO, USA). PI assay kits were purchased from Beyotime Institute of Biotechnology (Wuhan, China) and the Annexin V FITC/PI apoptosis detection kit was purchased from Nanjin KeyGen Biotech (Nanjing, China). The ATP Assay kit was purchased from Merck KGaA (Darmstadt, Germany). Lipofectamine 2000 was purchased from Invitrogen (USA). The following antibodies were used: anti-Mcl-1, anti-PARP, anti-RIP1, anti-RIP3 (Santa Cruz Biotechnology, Santa Cruz, CA, USA); anti-Bcl-2, anti-Bax, anti-HIF1a, anti-CDK4, anti-Her2, anti-EGFR (Proteintech, Chicago, IL, USA); anti-Hsp70, anti-Hsp90, anti-Akt (Cell Signaling Technology, Beverly, Massachusetts, USA); anti-caspase 3 and anti-caspase 8 (ENZO, Switzerland); anti-C-Raf (Abcam, Cambridge, MA, USA); and anti-β-actin (BioSharp, Hefei, China).
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