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Agilent 7890b 7000d system

Manufactured by Agilent Technologies
Sourced in United States

The Agilent 7890B/7000D system is a gas chromatograph-mass spectrometer (GC-MS) instrument designed for analytical applications. It combines the separation capabilities of gas chromatography with the identification and quantification capabilities of mass spectrometry. The system enables the analysis of complex mixtures by separating the components and providing detailed information about their molecular structure and concentration.

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7 protocols using agilent 7890b 7000d system

1

Metabolic Profiling of Murine Sera and Muscle

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The composition of amino acids and organic acids in murine sera and gastrocnemius muscle and that of short‐chain fatty acids (SCFAs) in murine sera and faeces were determined using gas chromatography–mass spectrometry (GC/MS) performed on an Agilent 7890B/7000D system (Agilent Technologies, Santa Clara, CA, USA). Methods are described in detail in the supporting information.
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2

Quantification of Lipid Profiles

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The levels of palmitic acid in the serum, liver, and feces, as well as SCFAs in the serum and feces and MCFAs in the serum and liver, were determined by gas chromatography-mass spectrometry (GC/MS) using an Agilent 7890B/7000D system (Agilent Technologies, Santa Clara, CA, USA). Measurements were conducted according to the previously outlined procedure [23 (link)].
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3

Analyzing Murine Metabolome by GC/MS

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The short‐chain fatty acid (SCFA) composition of the murine rectal faeces and serum samples and the amino acid composition of the murine plantaris muscle were analysed using GC/MS performed on an Agilent 7890B/7000D System (Agilent Technologies). Methods are described in detail in the Supporting Information.
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4

Quantifying Fatty Acids in Murine Samples

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Collected samples were stored at 30°C until being used in experiments. Serum ( 25μL ) obtained via cardiac puncture during euthanasia, feces from the small intestine ( 15μg ), and liver tissue ( 15μg ) samples were used for measuring free fatty acids. A fatty acid methylation kit (Nacalai Tesque) was used to analyze the methylation of samples. Gas chromatography–mass spectrometry (GC-MS) was performed using an Agilent 7890B/7000D system (Agilent Technologies) to measure palmitic acid levels in murine sera, feces, and liver tissues ( n=10 ). The final product was loaded onto a Varian capillary column (DB-FATWAX UI; Agilent Technologies). The capillary column used for fatty acid separation was CP-Sil 88 for FAME [ 100m×0.25mm
(inner diameter)×0.20μm (membrane thickness); Agilent Technologies]. The column was maintained at 100°C for 4 min, and the temperature was then increased gradually by 3°C/min to 240°C and held for 7 min. The sample was injected in split mode with a split ratio of 5:1. Each fatty acid methyl ester was detected in the selected ion-monitoring mode. All the results were normalized to the peak height for the C17:0 internal standard.55 (link)
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5

Fecal Short-Chain Fatty Acid Analysis

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Fecal SCFA concentrations were measured by gas chromatography/mass spectrometry (GC/MS). Briefly, 0.1 g of feces were homogenized with 0.4 ml ddH2O and centrifuged at 4 °C and 5000 rpm for 5 min. Aliquots (0.2 ml) of the supernatants were collected, and then 0.05 ml of 50% H2SO4 and 0.25 ml of diethyl ether containing 50 μg/ml 2-methylpentanoic acid were added. After vortexing for 2 min, the mixture was centrifuged at 4 °C and 12000 rpm for another 10 min. After incubation at − 20 °C for 30 min, the supernatants were collected in a vial containing anhydrous sodium sulfate and then measured by GC on an Agilent7890B-7000D system (Agilent Technologies, CA, USA) equipped with flame ionization, thermal conductivity detectors, capillary columns, and GC ChemStation software. Acetate, propionate, and butyrate were quantified using pure standards diluted in diethyl ether.
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6

SCFA Composition Analysis of Murine Samples

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The SCFA compositions of the murine feces of the rectum, serum, soleus muscle and white adipose tissue (eWAT) samples were analyzed using gas chromatography–mass spectrometry (GC/MS) on an Agilent 7890B/7000D System (Agilent Technologies, Santa Clara, CA), same as previously.(26 (link)) Methods are described in detail in the Supporting Information.
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7

Fecal SCFA Quantification by GC/MS

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Fecal SCFA concentrations were measured by gas chromatography/mass spectrometry. 20 mg of fecal samples were placed in a 2 mL microcentrifuge tube. Phosphoric acid (1 mL,0.5% v/v) and a small steel ball were added to the tube. After grinding three times for 10s each, the mixture was vortexed for 10 min and ultrasonicated for 5 min. The mixture was centrifuged at 12,000 rpm for 10 min at 4℃ and 0.1 mL of the supernatant was added to a 1.5 mL centrifuge tube. 0.5 mL methyl tert-butyl ether (MTBE) solution was added to the centrifuge tube. The mixture was vortexed for 3 min and ultrasonicated for 5 min, then centrifuged at 12,000 rpm for 10 min at 4℃, and measured by gas chromatography/mass spectrometry (GC/MS) using an Agilent7890B-7000D system (Agilent Technologies, CA, USA). Acetate, propionate, and butyrate were quantified using pure standards diluted in diethyl ether.
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