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7 protocols using ficoll plaque premium

1

Isolation and Enumeration of PBMCs

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The collected whole blood (1.5 mL) samples were diluted in 2.5 mL of Hank’s balanced salt solution (HBSS) and carefully layered into 15 mL SepMateTM tubes (StemCell Technologies, Vancouver, BC, Canada) containing 3.5 mL Ficoll Plaque Premium (GE Healthcare, Chicago, IL, USA). The tubes were centrifuged for 15 min (min) at 1200× g, 20 °C. The upper layer consisting of PBMCs was decanted into a 15 mL falcon tube containing 7 mL of HBSS. Following mixing, the tubes were centrifuged at 400× g (18 °C) for 15 min. Following centrifugation, the supernatant was discarded, and the pellet was resuspended in 7 mL of HBSS. The resuspended cells were centrifuged again under the same conditions. Then, the supernatant was discarded, and the pellet was resuspended in Roswell Park Memorial Institute medium (RPMI; Gibco, Carlsbad, CA, USA) containing 1% l-glutamine, 1% of antibiotic (100 U/mL penicillin and 100 µg/mL streptomycin) and 10% fetal bovine serum (FBS, Gibco, Carlsbad, CA, USA). The PBMCs in each sample were counted using LUNATM Cell Counting Slides (Logos Biosystems, Annandale, VA, USA) with the LunaTM Automated Cell Counter (Logos Biosystems, Annandale, VA, USA).
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2

PBMC Isolation and Mixed Lymphocyte Reaction

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Human peripheral blood mononuclear cells (PBMCs) were isolated from leucocyte cones of healthy donors by standard gradient centrifugation using Ficoll Plaque Premium (GE healthcare). PBMCs were then harvested from the interface, washed with PBS at 400g for 10 min and twice at 200g for 20 min. PBMCs were maintained at 37°C in a 5% CO2 atmosphere in RPMI 1640 medium, supplemented with 10% FCS, 100 U ml−1 penicillin and 100 µg ml−1 streptomycin, 2 mM L-glutamine, 1 mM sodium pyruvate and 1% MEM non-essential amino acids and 25 µM of the thiol-oxidoreductase inhibitor PX-12 when indicated. In a MLR, PBMCs isolated from two donors were mixed at a 1 : 1 ratio to a final concentration of 1–2 × 106 cells ml−1.
2B4 Saito hybridoma T cells [16 (link)] were maintained at 37°C in a 10% CO2 atmosphere in DMEM medium, supplemented with 10% FCS and 100 U ml penicillin and 100 µg ml−1 streptomycin.
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3

Dendritic Cell Vaccination for Cancer Treatment

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DC vaccination therapy at the Shinshu University Hospital was approved by the Ethics Committee of Shinshu University School of Medicine (approval number 1123 and 1199). The Act on the Safety of Regenerative Medicine in Japan was enforced since November 25, 2014. Class III technologies use somatic cells with accumulated clinical experiences and are regarded as low risk technologies. The DC vaccination therapy (Class III technology) at the Shinshu University was approved on November 25, 2015 (approval number: PC3150643 and PC3150645). Human peripheral blood mononuclear cell (PBMC)-rich fraction was collected from blood samples of patients via leukapheresis with a COM.TEC cell separator (Fresenius Kabi Japan K.K., Tokyo, Japan). PBMCs were subsequently isolated using a Ficoll-Plaque Premium (GE Healthcare, Piscataway, NJ, USA) density gradient. The collection and use of blood complied with relevant guidelines and institutional practices from Ethics Committees of Shinshu University School of Medicine (approval number 2107). Written informed consent was obtained from all patients. All methods in this study were performed in accordance with the Ethical Guidelines for Medical and Health Research involving Human Subjects proposed by Ministry of Health, Labour and Welfare in Japan60 .
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4

Isolation of MSCs from OA Patients

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Bone marrow derived MSCs isolated from the iliac crest of healthy donors were purchased from Lonza and were expanded in mesenchymal stem cell basal media (MSCBM; Lonza) containing 5 ng/ml human FGF2 (R&D Systems).
Bone marrow derived MSCs were extracted from the femoral head of OA patients following the protocol outlined by Neagu and colleagues [17 ]. Bone fragments from the marrow cavity of the femoral head were extracted into 10 ml of phosphate-buffered saline (PBS; Sigma) and layered on to 10 ml of Ficoll-Plaque Premium (GE Healthcare) and centrifuged at 800 x g for 40 minutes. The mononuclear cell layer was extracted from the cell suspension and washed in PBS containing 0.2% bovine serum albumin (BSA; Sigma) and 5 mM EDTA (Sigma) and centrifuged at 240 x g for 10 minutes. The cell pellet was resuspended in DMEM (Sigma) containing 10% FBS (Sigma), 2 mM GlutaMAX (Life Technologies), 100 U/ml penicillin and 100 μg/ml streptomycin (Sigma) and seeded in a T-25 cell culture flask. The medium was replaced after 24 hours and then every 3 days until the cells reached 80% confluence. The cells were passaged and cultured in MSCBM supplemented with 5 ng/ml FGF2.
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5

Isolation and Purification of CD4+CD25+ Regulatory T Cells

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For each subject, 30 mL of blood (supplemented with EDTA) were split in two falcon of 15 mL and spin for 12 minutes at 1000xg. Plasma was discarded and the interface between plasma and red blood cells, enriched in leukocytes and platelets (buffy coat), was carefully collected, diluted with cold PBS and stratified on 3 mL of Ficoll-Plaque™ PREMIUM (GE-Healthcare, Cat#17-5442-03). After centrifugation of 35 minutes at 250xg, PBMC layer was carefully collected and was 3 times with 10 mL of cold PBS at 180xg for 12 minutes to get rid of platelets. PBMC were counted and use for CD4+CD25+ Treg purification with CD4+CD25+ Regulatory T cell isolation kit, human (Miltenyi Biotec., Cat#130-09-301) according to manufacturer instructions. Purified CD4+CD25+ Treg or CD4+CD25- Tconv cell were counted with a hemocytometer and used for migration and suppression assay.
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6

Phagocytosis and Killing of S. aureus by Neutrophils

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Phagocytosis and killing of S. aureus by human neutrophils in presence of selected compounds was determined as described before47 (link). Polymorphonuclear cells (PMNs) were isolated from healthy human heparinized-defibrinated blood (Seralab Logistics) using Ficoll-Plaque PREMIUM (GE-Healthcare) according to manufacturer’s protocol and resuspended at a final concentration of 1 × 107 PMNs ml−1 in HBSS supplemented with human serum. S. aureus strains were cultured to the early stationary phase and 10 ml of culture were centrifuged, washed twice with sterile PBS and resuspended in Hank’s Balanced Salt Solution (HBSS) supplemented with human serum at a final concentration of 4 × 105 bacteria ml−1. Finally, 0.2 ml of PMNs solution was mixed with 0.2 ml of S. aureus solution and 600 μl of HBSS supplemented with human serum. Compounds were added at a final concentration of 5 μM. After incubation at 37 °C for 30 min, each sample was treated with gentamicin 100 mg ml−1 and then 100 μl of each mixture were added to 1 ml of pH 11 solution. Finally, serial dilutions were plated on TSA to determine the number of colony-forming units (CFU) in presence of the different compounds. All data were referred to initial CFU number.
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7

Generating M1 Macrophages from Mononuclear Cells

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THP-1 monocytic leukemia cells were grown in suspension in RPMI1640 medium containing 10% heat-inactivated fetal bovine serum (FBS), streptomycin and penicillin. Mononuclear cells were isolated from heparinized human blood (with informed consent of donors and approval of the Research Ethics Committees, REC10/MRE09/28) on Ficoll-Plaque PREMIUM (GE Healthcare), washed in PBS, and cultured for 7 days as THP-1 cells but with addition of 20 ng/ml human GM-CSF (Preprotech) to derive M1 macrophages. HEK293 flp-in cells (Invitrogen) were cultured in Dulbecco's modified Eagle's medium (DMEM) containing 10% FBS, the above antibiotics and 100 µg/ml zeocin (Invitrogen). Experiments were conducted without antibiotics.
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