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7 protocols using ab32103

1

Western Blot Analysis of Cell Signaling

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PBS at 4 °C was used to wash the cells twice. Thereafter, protease inhibitors in cold RIPA buffer were used to lyse the cells. Protein concentration was determined using BCA Protein Quantitation Assay (KeyGen Biotech, Nanjing, China). Total protein of the cells were denatured using 10% SDS-PAGE and then transferred onto a nitrocellulose membrane. 5% non-fat milk in Tris-buffered saline containing 0.1% Tween-20 (TBST) was used to block the membrane for 1 h at room temperature. The membranes were then incubated with the primary antibodies overnight at 4 °C (dilution ratio 1:2000). TBST was used to wash the membranes three times and they were subsequently incubated with secondary antibodies (anti-rabbit IgG or anti-mouse IgG) for 1 h at room temperature. TBST was once again used to wash the membranes three times. The targeted proteins were identified using the ECL (EMD Millipore, MA, USA) method. SKA3, CCNE2, CCNA2, CDK4, CDK2, P53, P53-pSer15, P53-pSer46 antibodies used for western blot in this research were purchased from Bioss (bs-7848R), Abcam (ab32147), Abcam (ab108357), Abcam (ab181591), Abcam (ab32103), Abcam (ab32389), CST #9284 and CST#2521.
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2

Western Blot Analysis of CARM1, CCNE2, and Histone Modifications

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PC9 and HCC827 cells were washed twice with ice-cold PBS and lysed with RIPA buffer (50 mM Tris, 1 mM EDTA, 150 mM NaCl, 1% Sodium deoxycholate, 0.1% SDS) (P0013B; Beyotime; China). The lysed samples were centrifuged for 15 min at a maximum speed (14000 rpm). The whole cell extracts were quantified by BCA Protein Assay kit (P0012S; Beyotime; China) and boiled for 5 min. Denatured proteins was separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to PVDF membranes (Millipore). Subsequently, PVDF membranes were blocked with 5% milk-powder in PBST (1×PBS containing 0.1% Tween-20) for 1 ~ 2 h and then incubated overnight with primary antibodies, including CARM1 (Abcam; ab245467), CCNE2 (Abcam; ab32103), H3R17me2a (Abcam; ab8284), H3R26me2a (Abcam; ab194679), Histone H3 (Abcam; ab1791) and GAPDH (Abcam; ab181602). After washing with PBST, the PVDF membranes were incubated with horseradish peroxidase-conjugated secondary antibody (Sigma). Protein expression was visualized by enhanced chemiluminescence detection kit (Thermo Scientific Pierce). GAPDH was used as a loading control.
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3

Protein Expression Analysis in Clinical Samples

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The RIPA lysis buffer (Beyotime, China) was used extract total proteins from clinical tissues and cell lines. The proteins were separated by 10% sodium sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and the targeted protein bands were transferred onto PVDF membrane (Sigma, USA). Subsequently, the PVDF membranes were probed with the primary antibodies including anti-β-actin (#ab8226, Abcam, USA), anti-SOD2 (#ab13534, Abcam, USA), anti-NLRP3 (#ab214185, Abcam, USA), anti-CyclinD1 (#ab16663, Abcam, USA), anti-Cyclin E2 (#ab32103, Abcam, USA), anti-CDK2 (#ab32147, Abcam, USA), anti-CDK4 (#ab108357, Abcam, USA), anti-CDK6 (#ab124821, Abcam, USA), anti-Caspase 3 (#ab13847, Abcam, USA), anti-Bax (#ab32503, Abcam, USA), anti-Bcl-2 (#ab185002, Abcam, USA), anti-Caspase 1 (#ab238979, Abcam, USA) and anti-IL-1β (#ab33774, Abcam, USA). After that, the membranes were incubated with anti-Rabbit IgG antibody at 4°C for 24h, and the enhanced chemiluminescent (ECL) system was employed to detect the protein bands. Finally, all the protein bands were quantified by Image J software. The primers sequences of the target genes were listed in Table 1.
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4

Enriched Spermatocyte and Spermatid Isolation

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Preparation of enriched populations of pachytene spermatocytes and round spermatids was carried out according to our laboratory's established protocol [41] (link), [42] (link). Purity of cell populations was assessed by flow cytometric analysis on a Becton Dickinson FACScan Flow Cytometer. Results were analyzed using CellQuest Pro software. Proteins were extracted from purified cell populations from adult testes as previously described [43] (link). Rabbit anti-cyclin E2 1∶500 (Abcam, ab32103), rabbit anti-cyclin E1 1∶3000 (provided by Dr. Jim Roberts, Fred Hutchinson Cancer Research Center) and mouse anti-α tubulin 1∶5000 (Sigma T6199) were used for immunoblot analysis according to our standard procedures [43] (link).
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5

Western Blot Analysis of TGFBR1, CCNE2, and GAPDH

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For western blot analysis, RIPA buffer containing protease inhibitors and phosphatase inhibitors (Roche) was used to prepare whole-cell lysates. Equal amounts of proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to PVDF membranes (Millipore). After blocking with 5% bovine serum albumin (BSA), the membranes were probed with anti-TGFBR1, CCNE2, and anti-GAPDH (ab31013, ab32103, and ab8425; Abcam, Cambridge, UK), followed by incubation with a horseradish peroxidase-conjugated secondary antibody goat-anti-mouse IgG (1:2000) and goat-anti-rabbit IgG (1:3000). Proteins were visualized using Image Reader LAS-4000 (Fujifilm) and analyzed using the Multi Gauge V3.2 software.
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6

Quantitative Immunohistochemical Analysis of CARM1 and CCNE2 Expression in NSCLC

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Surgically resected fresh NSCLC tissues were formalin-fixed, paraffin-embedded and sectioned. Briefly, the sections were treatment with hydrogen peroxide (H2O2) and then incubated overnight with the primary antibodies, and then with anti-mouse or anti-rabbit secondary antibody. Lastly, the sections were incubated with 3,3’-diaminobenzidine (DAB) substrate until the positive staining was achieved. The protein expression of CARM1 (Abcam; ab245467) or CCNE2 (Abcam; ab32103) in NSCLC tissues were evaluated blindly by two experienced pathologists. The protein expression was assessed according to staining intensity and percentage of positive cells to generate a histological score (H score). The H score was calculated using the formula: H score = ΣPi (i + 1), where i is the intensity score (0 ~ 3), and Pi is the percentage of stained positive cells (0% ~ 100%).
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7

Protein Expression Analysis Protocol

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The total protein content was isolated with an enhanced radio immunoprecipitation assay lysis buffer (Wuhan Boster Biological Technology Co., Ltd., Wuhan, China). The proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then transferred to a polyvinylidene fluoride membrane. After being blocked in sealing solution, the membrane was incubated with the primary antibodies rabbit anti-human CCNE1 (1:2000, ab33911), CCNE2 (1:500, ab32103), KI67 (1: 000, ab92742), proliferating cell nuclear antigen (PCNA) (1:1000, ab925522), or GAPDH (1:5000, ab181602, all from Abcam Inc., Cambridge, MA, USA), which served as a NC, at 4 °C overnight. The next day, the membrane was incubated with secondary goat anti-rabbit IgG (1:10000, ab205718, Abcam Inc., Cambridge, MA, USA) at 37 °C for 1 h. The samples were developed using ECL reaction solution, photographed using SmartView Pro 2000 (UVCI-2100, Major Science, Saratoga, CA, USA), followed by gray scale analysis of the protein band pattern using the Quantity One software.
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