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8 protocols using erk1 2

1

Anti-inflammatory Mechanisms of RAW264.7 Cells

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The RAW264.7 cells (TCM13) were purchased from the American Type Culture Collection (Rockville, MD, USA). LPS was obtained from Beijing Solarbio Co., Ltd. (Beijing, China). CCK-8 kit was purchased from Jiangsu Kaiji Biotechnology Co., Ltd. (Jiangsu, China). NO was obtained from Jiancheng Biotechnology Co., Ltd. (Nanjing, China). TNF-α, IL-6 and PGE2 enzyme linked immunosorbent assay (ELISA) kits were provided by Shanghai Youchu Trading Co., Ltd. (Shanghai, China). Nuclear transcription factor E2 related factor 2 (Nrf2), p65 and β-tubulin antibodies were obtained from Proteintech Group, Inc. (USA). P-p65 and p-p38antibodies were obtained from Affinity Biosciences (USA). ERK1/2, p-ERK1/2, p38, p-JNK, JNK antibodies and DCFH-DA kit were purchased from Beyotime Biotechnology Co., Ltd. (Shanghai, China). β-actin, heme oxygenase-1 (HO-1) and IgG antibodies were purchased from Boster Biological Engineering Co., Ltd. (Wuhan, China). GAPDH, iNOS and COX-2 primers were obtained from Servicebio Biotechnology Co., Ltd. (Wuhan, China), etc.
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2

Immunofluorescence Staining of Mouse Brain

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Mouse brain frozen sections (10 μm) and cells were fixed in 4% PFA for 30 min, then followed by three washes in phosphate-buffered saline (PBS), permeabilized with 0.5% Triton X-100 (Beyotime, Shanghai, China) in PBS for 20 min, blocked in 3% BSA (Solarbio, Beijing, China) for 1 h, and incubated with primary antibodies FNDC5 (Affinity, 1:200), GFAP (Beyotime, 1:100), NeuN (CST, 1:500), Iba-1 (abcam, 1:100) or ERK1/2 (Beyotime, 1:100) overnight at 4 °C. The binding antibodies were identified using a 1:500 dilution of AlexaFluor488 or AlexaFluor568 antibody for 1 h at room temperature, followed by 5 min of staining with DAPI (Solarbio, Beijing, China). A fluorescent microscope (OLYMPUS ix83, Japan) was used to acquire the images.
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3

Protein Extraction and Western Blot Analysis

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Total proteins were extracted using RIPA lysis buffer with PMSF (both from Beyotime Institute of Biotechnology). Protein concentrations were assessed using a BCA Protein Assay kit (Beyotime Institute of Biotechnology). A total of 40 µg protein was separated by 8-10% SDS-PAGE and transferred onto PVDF membranes. After blocking with 5% skim milk for 1 h at room temperature, the membranes were incubated at 4°C overnight with the following primary antibodies: p-ERK1/2 (1:1,000; cat. no. AF1891; Beyotime Institute of Biotechnology); ERK1/2 (1:5,000; cat. no. ab184699); p-AKT (1:1,000; cat. no. ab38449) (both from Abcam); AKT (1:1,000; cat. no. 9272S); STAT3 (1:1,000; cat. no. 12640S) (both from Cell Signaling Technology, Inc.); p-STAT3 (1:5,000; cat. no. ab76315); p-ribosomal S6 kinase P90 (p-RSK1P90; 1:5,000; cat. no. ab32203); RSK1P90 (1:5,000; cat. no. ab32114); MMP9 (1:5,000; cat. no. ab76003); MMP2 (1:2,000; cat. no. ab92536) (all from Abcam); and GAPDH (1:1,000; cat. no. 5174S; Cell Signaling Technology, Inc.). Subsequently, appropriate horseradish peroxidase (HRP)-conjugated secondary antibodies (1:1,000; cat. nos. 7074S and 7076S; Cell Signaling Technology, Inc.) were applied for 1 h at 37°C. The immunoreactive bands were detected using an enhanced chemiluminescence reagent (EMD Millipore).
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4

Evaluating Cellular Signaling Pathways

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HCT116 cells seeded in a six-well plate were PBS treated or infected with viruses for 48 h, and the cells were harvested and lysed with RIPA lysis buffer containing protease and phosphatase inhibitors. Protein concentration was measured using the BCA protein assay kit (Thermo Fisher Scientific, Carlsbad, CA, USA), and equal amounts of proteins from each sample were separated using SDS-PAGE and transferred to polyvinylide difluoride membrane (Thermo Fisher Scientific). The antibodies against PARP, PKR, p38 MAPK, p-p38 MAPK (Thr180/Tyr182), JNK, p-JNKs (Thr183/Thr183/Thr221), STAT3, and p-STAT3 (Tyr705) were purchased from Cell Signaling Technology (Danvers, MA, USA), ERK1/2, p-ERK1 (Thr202/Tyr204)/ERK2 (Thr185/Tyr187), Bad, Bcl-xL, and Bcl-2 were purchased from Beyotime Institute of Biotechnology (China). β-Actin was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Immunoreactive bands were visualized with chemiluminescence using ECL Western blot detection reagents (Santa Cruz Biotechnology).
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5

Protein Expression Analysis by Western Blot

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Protein samples were extracted with lysis buffer. 15 μg protein samples from each group were loaded onto the SDS polyacrylamide gel for electrophoresis and transferred to NC membranes (Millipore, Billerica, MA, USA). After blocking in 5% non-fat milk at room temperature for 2 h, primary antibodies: NPRA (1:1000; Santa Cruz Biotechnology), NPRC (1:1000; Santa Cruz Biotechnology), PGRMC1 (1:1000; Cell Signaling), PGRMC2 (1:1000), Bax (1:2000; Proteintech), Bcl-2 (1:2000; Proteintech), Caspase 8 (1:1000; Proteintech), Caspase 9 (1:1000; Proteintech), PCNA (1:2000; Proteintech), EGFR (1:500; Proteintech), p-EGFR (1:500; Cell Signaling), ERK 1/2 (1:500; Beyotime Biotechnology), p-ERK 1/2 (1:500; Beyotime Biotechnology), p-c-Fos (1:500; Cell Signaling), c-Fos (1:500; Cell Signaling), p-c-Jun (1:500; Cell Signaling), c-Jun (1:500; Cell Signaling) and GAPDH (1:2000; Proteintech) were incubated at 4 °C overnight. Next day, secondary antibodies (1:2000; Cell Signaling) were incubated for 45 min at room temperature. ECL detection system was used to visualize the bands. All experiments were repeated at least three separate times.
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6

Immunofluorescence Analysis of Cytoskeletal Proteins

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Cell climbing sheets were prepared and fixed in 4% paraformaldehyde for 10 min at room temperature. Subsequently, permeabilization was performed with 0.5% Triton X-100 for 10 min at room temperature. Additionally, three washes were performed with PBS for 5 min each, and the solution blocked with 5% BSA for 2 h. Primary antibodies against Flag (Beyotime, Shanghai, China, 1:200), Nesprin2 (Abcam, Cambridge, UK, 1:200), ERK1/2 (Beyotime, 1:200), and pERK1/2 (Cell Signaling Technology, Danvers, MA, USA, 1:100) were incubated at 4 ℃ overnight. After washing with PBS three times, a fluorescent secondary antibody was used and incubated at room temperature for 1 h. The nuclei were stained with DAPI, blocked with glycerol, and finally observed under fluorescence microscope (Zeiss, Jena, Germany). Each process was repeated three times.
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7

Western Blot Analysis of Phosphorylated Erk1/2 in MC3T3-E1 Cells

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MC3T3-E1 cells were harvested and washed 3 times with ice-cold PBS and lysed with TEN-T buffer (150 mM NaCl, 10 mM Tris- HCl, pH 7.4, 5 mM EDTA, pH 8.0, 1% Triton X-100, 1 mM PMSF, and 2 μg/mL of aprotinin). Cell debris was discarded by centrifuging at 12,000 × g for 15 minutes at 4 °C. Using 10% sodium dodecyl sulfate (SDS)-polyacrylamide gels, 30 μg of total protein was fractioned. Proteins were transferred to polyvinylidene fluoride (PVDF) membranes for blotting. Proteins were blocked with 5% skim milk for 2 hours at room temperature. The antibody against p-Erk1/2 was used at a 1:1000 dilution (Cell Signaling Technology, USA) and Erk1/2 at 1:1000 (Beyotime Biotech, China) for blotting overnight at 4 °C. Secondary antibodies were used at 1:10,000 dilutions. An enhanced chemiluminescent substrate for the detection of horseradish peroxidase (HRP) (Pierce, USA) was used to visualize the immunoreactivity. Molecular analyst software (Quantity One, Bio-Rad, USA), was used to detect the density of the areas of interest in the western blotting experiment. Erk1/2 was used as an internal control. The density of p-Erk1/2/Erk1/2 was computed and represented.
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8

Western Blot Analysis of BMSC Signaling

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BMSCs were planted on the MBG-NH2, MBG-NH2/IGF and MBG-NH2/IGF@SF/VEGF scaffolds in a 6-well plate at a density of 1 × 105 cells/mL. After 5 days of culture, the collected cells were washed with PBS and then lysed (lysate: EDTA: phosphatase inhibitor: protease inhibitor = 50:1:1:1) on ice. The protein was obtained after centrifuging at 12,000× g for 15 min at 4 °C. After determining the protein concentration with a BCA protein assay kit (Thermo, Waltham, MA, USA), 30 μg of protein was mixed with a ×6 loading buffer and lysate before being heated in a water bath to denature it. Then, 10% sodium dodecyl sulfate (SDS)–polyacrylamide gel electrophoresis was performed on the denatured protein, and the protein bands were transferred to a polyvinylidene fluoride (PVDF) membrane. The bands were stained with reed red and blocked with 5% (w/v) skim milk. After incubation for 2 h with Erk1/2 (Beyotime Biotech, Haimen, China, 1:1000), phospho-Erk1/2 (p-Erk, Cell Signaling Technology, Danvers, MA, USA, 1:2000), mTOR (Abcam, Cambridge, UK, 1:2000), and phospho-mTOR (p-mTOR, Abcam, Cambridge, UK, 1:2000), the PVDF membrane was treated with the corresponding species source of the second antibody at a 1:5000 dilution. Immunoreactivity was determined with enhanced chemiluminescent substrate (Pierce, MO, USA) for HRP detection.
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