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Pecy7 conjugated anti cd56

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PECy7-conjugated anti-CD56 is a monoclonal antibody that binds to the CD56 protein expressed on the surface of natural killer cells and a subset of T cells. The antibody is conjugated with the PECy7 fluorescent dye, which can be detected using flow cytometry.

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8 protocols using pecy7 conjugated anti cd56

1

Assessing Natural Killer Cell Function

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Assessment of NK cell function by flow cytometry was carried out as previously described(30 ). Briefly, PBMCs (n=6) and targets cells were co-cultured and stained with FITC conjugated anti-CD107a (93937, BioLegend). An hour later, Golgi Stop and Golgi Plug (BD Biosciences) was added and cells were incubated for 3 hours. Cells were stained with Live/Dead Fixable Aqua Staining Kit (Thermo Fisher), PE-CY7 conjugated anti-CD56 and PE-CF594 conjugated anti-CD3, PE conjugated anti-CD69 (310906 (FN50), BioLegend), fixed and permeabilized. Permeabilized cells were stained with BV650 conjugated IFNγ (93705 (4S.B3), BioLegend) and BV421 conjugated TNFα (562783 (Mab11), BD Biosciences).
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2

Assessing Natural Killer Cell Function

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Assessment of NK cell function by flow cytometry was carried out as previously described(30 ). Briefly, PBMCs (n=6) and targets cells were co-cultured and stained with FITC conjugated anti-CD107a (93937, BioLegend). An hour later, Golgi Stop and Golgi Plug (BD Biosciences) was added and cells were incubated for 3 hours. Cells were stained with Live/Dead Fixable Aqua Staining Kit (Thermo Fisher), PE-CY7 conjugated anti-CD56 and PE-CF594 conjugated anti-CD3, PE conjugated anti-CD69 (310906 (FN50), BioLegend), fixed and permeabilized. Permeabilized cells were stained with BV650 conjugated IFNγ (93705 (4S.B3), BioLegend) and BV421 conjugated TNFα (562783 (Mab11), BD Biosciences).
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3

Adaptive NK Cells in CMV Reactivation

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Peripheral blood mononuclear cells (PBMCs) from HCT recipients were isolated from peripheral blood samples by density gradient centrifugation and analyzed by fluorescence-activated cell sorting (FACS) using an LSR II (BD Biosciences). PBMCs from recipients that reactivated CMV were collected at viral diagnosis, at 2, 4 and 8 weeks after antiviral therapy and at 6 months and 1 year post-transplant. For recipients that were CMV seronegative or were CMV seropositive without viral reactivation, PBMCs were collected at day 100, 6 months and 1 year post-transplant. The following fluorescently conjugated antibodies were used for phenotypic analysis: ECD-conjugated anti-CD3 (Beckman Coulter; IM2705U), PECy7-conjugated anti-CD56 (BioLegend; 318318), Pacific Blue-conjugated anti-CD57 (BioLegend; 322316) and PE-conjugated NKG2C (R&D Systems FAB138P-025). For statistical comparisons of adaptive NK cell percentages and absolute counts between RIC and MA recipients, unpaired, two-sided t-tests calculated using GraphPad were used. Error bars represent SEM. GraphPad was used to calculate R2 values and associated p values for the correlation between absolute monocyte and lymphocyte counts and adaptive NK cell expansion in 28 CMV seropositive recipients.
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4

Functional Analysis of NK Cell Subsets

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Buffy coats collected from 5 healthy CMV seropositive donors were obtained from Memorial Blood Bank (Minneapolis, MN). Peripheral blood mononuclear cells (PBMCs) were isolated by density gradient centrifugation using Ficoll-Paque (GE Healthcare) and cultured with K562 cells at a 2:1 (effector:target) ratio for 5 hours in RPMI media supplemented with 10% fetal bovine serum (Gibco). GolgiStop and GolgiPlug protein transport inhibitors (BD Biosciences) were added 1 hour into the assay. The following antibodies were used for functional analysis of NK cell subsets: BV785-conjugated anti-CD3 (clone OKT3; Biolegend), PECy7-conjugated anti-CD56 (BioLegend; 318318), PE-CF594-conjugated anti-CD57 (Biolegend; 359620), PE-conjugated NKG2C (R&D Systems; FAB138P-025), PerCP-Cy5.5-conjugated anti-CD107a (Biolegend; 328616), AF700-conjugated anti-TNF (Biolegend; 502928) and BV605-conjugated IFN-γ (Biolegend; 502536). The K562 cell line was purchased from ATCC (Manassas, Virginia) and is screened monthly for mycoplasma contamination. The experiment was performed at 2 independent times. Two-sided, paired t-tests in GraphPad were used to determine significance. Error bars represent SEM.
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5

Adaptive NK Cells in CMV Reactivation

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Peripheral blood mononuclear cells (PBMCs) from HCT recipients were isolated from peripheral blood samples by density gradient centrifugation and analyzed by fluorescence-activated cell sorting (FACS) using an LSR II (BD Biosciences). PBMCs from recipients that reactivated CMV were collected at viral diagnosis, at 2, 4 and 8 weeks after antiviral therapy and at 6 months and 1 year post-transplant. For recipients that were CMV seronegative or were CMV seropositive without viral reactivation, PBMCs were collected at day 100, 6 months and 1 year post-transplant. The following fluorescently conjugated antibodies were used for phenotypic analysis: ECD-conjugated anti-CD3 (Beckman Coulter; IM2705U), PECy7-conjugated anti-CD56 (BioLegend; 318318), Pacific Blue-conjugated anti-CD57 (BioLegend; 322316) and PE-conjugated NKG2C (R&D Systems FAB138P-025). For statistical comparisons of adaptive NK cell percentages and absolute counts between RIC and MA recipients, unpaired, two-sided t-tests calculated using GraphPad were used. Error bars represent SEM. GraphPad was used to calculate R2 values and associated p values for the correlation between absolute monocyte and lymphocyte counts and adaptive NK cell expansion in 28 CMV seropositive recipients.
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6

Functional Analysis of NK Cell Subsets

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Buffy coats collected from 5 healthy CMV seropositive donors were obtained from Memorial Blood Bank (Minneapolis, MN). Peripheral blood mononuclear cells (PBMCs) were isolated by density gradient centrifugation using Ficoll-Paque (GE Healthcare) and cultured with K562 cells at a 2:1 (effector:target) ratio for 5 hours in RPMI media supplemented with 10% fetal bovine serum (Gibco). GolgiStop and GolgiPlug protein transport inhibitors (BD Biosciences) were added 1 hour into the assay. The following antibodies were used for functional analysis of NK cell subsets: BV785-conjugated anti-CD3 (clone OKT3; Biolegend), PECy7-conjugated anti-CD56 (BioLegend; 318318), PE-CF594-conjugated anti-CD57 (Biolegend; 359620), PE-conjugated NKG2C (R&D Systems; FAB138P-025), PerCP-Cy5.5-conjugated anti-CD107a (Biolegend; 328616), AF700-conjugated anti-TNF (Biolegend; 502928) and BV605-conjugated IFN-γ (Biolegend; 502536). The K562 cell line was purchased from ATCC (Manassas, Virginia) and is screened monthly for mycoplasma contamination. The experiment was performed at 2 independent times. Two-sided, paired t-tests in GraphPad were used to determine significance. Error bars represent SEM.
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7

Cytotoxicity Assay for Immune Cells

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Procedures were previously reported [5 (link)]. Isolated PBMCs were washed and then incubated overnight (37°C, 5% CO2) in RPMI 1640 supplemented with 10% fetal bovine serum. Cells were washed and treated with the respective concentrations of 1615EpCAM133, EpCAM16, anti-EpCAM scFv, IL-15 (NCI derived), anti-CD133 scFv and incubated for 10 minutes at 37°C with 5% CO2. FITC-conjugated anti-human CD107a monoclonal antibody (mAb) (LAMP-1) (BD biosciences, New Jersey, CA, USA), was added and further incubated for 1 hour. GolgiStop (1:1500) (BD Biosciences, San Jose, CA, USA) and GolgiPlug (1:1000) (BD Biosciences, San Jose, CA, USA) were added and cells were further incubated for 3 hours. Cells were washed and stained with the following mAb from BioLegend, San Diego, CA, USA: PE/Cy7-conjugated anti-CD56; APC/Cy 7-conjugated anti-CD16; PE-CF594-conjugated anti-CD3. After incubation for 30 minutes, cells were fixed with 2% paraformaldehyde. For intracellular staining, Pacific Blue-conjugated anti-human IFN-γ (BioLegend, San Diego, CA, USA) was used after permeabilization with permeabilization buffer (BD Biosciences, San Jose, CA, USA). After incubation for 15 minutes cells were washed and evaluated by FACS analysis using a LSRII flow cytometer (BD Biosciences, San Jose, CA, USA).
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8

Isolation and Culture of T-cell Subsets

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Whole blood samples were collected from each subject by venipuncture, and density gradient centrifugation was used to extract PBMCs. CD4+ T cells (CD3+CD4+), CD8+ T cells (CD3+CD8+), monocytes (CD3−CD14+), natural killer (NK) cells (CD3−CD56+), and B cells (CD3−CD19+) of HCs were sorted from PBMCs using a BD FACS Aria flow cytometer. The following monoclonal antibodies (mAbs, Biolegend) were used: PerCP-conjugated anti-CD3, FITC-conjugated anti-CD4, PE-conjugated anti-CD8, PE-CY7-conjugated anti-CD14, PE-CY7-conjugated anti-CD56 and PerCP-conjugated anti-CD19. STEMCELL was used to sort CD8+ T cells from HIV-infected patients, and the sorting purity was detected by flow cytometry. CD8+ T cells were cultured in Roswell Park Memorial Institute (RPMI) 1640 supplemented with 10% fetal bovine serum (FBS) (HyClone), 1% penicillin–streptomycin (Gibco) and IL-2 [30 (link), 31 (link)] (30 U/ml, Sigma). Transfection of siRNA and controls (Invitrogen) was performed with Lipofectamine™ RNAiMAX Transfection Reagent (Invitrogen). Briefly, cells were transfected with 100 pmol of eIF3d siRNA or 75 pmol of eIF3d siRNA plus 75 pmol of SOCS-7 siRNA. Transfection efficiency was measured by real-time PCR after 48 h of transfection.
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